RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PRXQ9BXM0 1461 aa18.57■□□□□ 0.56
CPSF7-212ENST00000489728 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
CPSF7-212ENST00000489728 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
CPSF7-212ENST00000489728 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
CPSF7-212ENST00000489728 IQGAP2Q13576 1575 aa18.47■□□□□ 0.55
CPSF7-212ENST00000489728 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
CPSF7-212ENST00000489728 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
CPSF7-212ENST00000489728 KIF21BO75037 1637 aa18.44■□□□□ 0.54
CPSF7-212ENST00000489728 PRG4Q92954 1404 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-212ENST00000489728 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
CPSF7-212ENST00000489728 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.54
CPSF7-212ENST00000489728 CARMIL2Q6F5E8 1435 aa18.36■□□□□ 0.53
CPSF7-212ENST00000489728 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
CPSF7-212ENST00000489728 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-212ENST00000489728 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
CPSF7-212ENST00000489728 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
CPSF7-212ENST00000489728 KIAA0556O60303 1618 aa18.29■□□□□ 0.52
CPSF7-212ENST00000489728 TNIKQ9UKE5 1360 aa18.27■□□□□ 0.51
CPSF7-212ENST00000489728 PTPRGP23470 1445 aa18.23■□□□□ 0.51
CPSF7-212ENST00000489728 SAMD9Q5K651 1589 aa18.21■□□□□ 0.51
CPSF7-212ENST00000489728 EFCAB5A4FU69 1503 aa18.18■□□□□ 0.5
CPSF7-212ENST00000489728 ADCY10Q96PN6 1610 aa18.17■□□□□ 0.5
CPSF7-212ENST00000489728 UHRF1BP1LA0JNW5 1464 aa18.17■□□□□ 0.5
CPSF7-212ENST00000489728 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
CPSF7-212ENST00000489728 UACAQ9BZF9 1416 aa18.13■□□□□ 0.49
CPSF7-212ENST00000489728 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
CPSF7-212ENST00000489728 MAPKBP1O60336 1514 aa18.1■□□□□ 0.49
CPSF7-212ENST00000489728 ABCA8O94911 1581 aa18.08■□□□□ 0.49
CPSF7-212ENST00000489728 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPSF7-212ENST00000489728 KDM5BQ9UGL1 1544 aa18.05■□□□□ 0.48
CPSF7-212ENST00000489728 PLB1Q6P1J6 1458 aa18.04■□□□□ 0.48
CPSF7-212ENST00000489728 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
CPSF7-212ENST00000489728 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.48
CPSF7-212ENST00000489728 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
CPSF7-212ENST00000489728 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
CPSF7-212ENST00000489728 RAPGEF6Q8TEU7 1601 aa18■□□□□ 0.47
CPSF7-212ENST00000489728 ZCCHC11Q5TAX3 1644 aaKnown RBP17.99■□□□□ 0.47
CPSF7-212ENST00000489728 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
CPSF7-212ENST00000489728 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
CPSF7-212ENST00000489728 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
CPSF7-212ENST00000489728 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
CPSF7-212ENST00000489728 CLIP1P30622 1438 aa17.94■□□□□ 0.46
CPSF7-212ENST00000489728 ASXL2Q76L83 1435 aa17.94■□□□□ 0.46
CPSF7-212ENST00000489728 DIP2BQ9P265 1576 aa17.93■□□□□ 0.46
CPSF7-212ENST00000489728 TRHP20396 242 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-212ENST00000489728 KIF13AQ9H1H9 1805 aa17.92■□□□□ 0.46
CPSF7-212ENST00000489728 NUP153P49790 1475 aaKnown RBP17.91■□□□□ 0.46
CPSF7-212ENST00000489728 ATP10BO94823 1461 aa17.89■□□□□ 0.45
CPSF7-212ENST00000489728 WDR7Q9Y4E6 1490 aa17.89■□□□□ 0.45
CPSF7-212ENST00000489728 GLI2P10070 1586 aa17.89■□□□□ 0.45
CPSF7-212ENST00000489728 HECW1Q76N89 1606 aa17.89■□□□□ 0.45
CPSF7-212ENST00000489728 CEP162Q5TB80 1403 aa17.89■□□□□ 0.45
CPSF7-212ENST00000489728 EPRSP07814 1512 aaKnown RBP17.84■□□□□ 0.45
CPSF7-212ENST00000489728 FYCO1Q9BQS8 1478 aa17.83■□□□□ 0.45
CPSF7-212ENST00000489728 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.45
CPSF7-212ENST00000489728 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
CPSF7-212ENST00000489728 PCF11O94913 1555 aaKnown RBP17.81■□□□□ 0.44
CPSF7-212ENST00000489728 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
CPSF7-212ENST00000489728 CCDC18Q5T9S5 1454 aa17.8■□□□□ 0.44
CPSF7-212ENST00000489728 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
CPSF7-212ENST00000489728 CFAP43Q8NDM7 1665 aa17.77■□□□□ 0.44
CPSF7-212ENST00000489728 CDK13Q14004 1512 aaKnown RBP17.76■□□□□ 0.43
CPSF7-212ENST00000489728 ABCA9Q8IUA7 1624 aa17.74■□□□□ 0.43
CPSF7-212ENST00000489728 LRRIQ1Q96JM4 1722 aa17.73■□□□□ 0.43
CPSF7-212ENST00000489728 PLEKHD1A6NEE1 506 aa17.73■□□□□ 0.43
CPSF7-212ENST00000489728 ARID3CA6NKF2 412 aa17.73■□□□□ 0.43
CPSF7-212ENST00000489728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-212ENST00000489728 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
CPSF7-212ENST00000489728 CDK11AQ9UQ88 783 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-212ENST00000489728 TEX14Q8IWB6 1497 aa17.72■□□□□ 0.43
CPSF7-212ENST00000489728 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.43
CPSF7-212ENST00000489728 MAGI3Q5TCQ9 1506 aa17.71■□□□□ 0.43
CPSF7-212ENST00000489728 ATP1B4Q9UN42 357 aaPredicted RBP17.69■□□□□ 0.42
CPSF7-212ENST00000489728 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
CPSF7-212ENST00000489728 TSPOAP1O95153 1857 aa17.68■□□□□ 0.42
CPSF7-212ENST00000489728 CD109Q6YHK3 1445 aa17.68■□□□□ 0.42
CPSF7-212ENST00000489728 TROQ12816 1431 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-212ENST00000489728 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
CPSF7-212ENST00000489728 KIF14Q15058 1648 aa17.65■□□□□ 0.42
CPSF7-212ENST00000489728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.64■□□□□ 0.41
CPSF7-212ENST00000489728 PHLDB1Q86UU1 1377 aa17.62■□□□□ 0.41
CPSF7-212ENST00000489728 TTC37Q6PGP7 1564 aa17.62■□□□□ 0.41
CPSF7-212ENST00000489728 KDM6BO15054 1643 aa17.61■□□□□ 0.41
CPSF7-212ENST00000489728 ARAP3Q8WWN8 1544 aa17.61■□□□□ 0.41
CPSF7-212ENST00000489728 MAP3K1Q13233 1512 aa17.6■□□□□ 0.41
CPSF7-212ENST00000489728 CFAP74Q9C0B2 1584 aa17.6■□□□□ 0.41
CPSF7-212ENST00000489728 NEO1Q92859 1461 aa17.59■□□□□ 0.41
CPSF7-212ENST00000489728 EHBP1L1Q8N3D4 1523 aa17.57■□□□□ 0.4
CPSF7-212ENST00000489728 MYO5CQ9NQX4 1742 aa17.57■□□□□ 0.4
CPSF7-212ENST00000489728 TIAM1Q13009 1591 aa17.57■□□□□ 0.4
CPSF7-212ENST00000489728 PLCH2O75038 1416 aa17.55■□□□□ 0.4
CPSF7-212ENST00000489728 MTUS2Q5JR59 1369 aa17.54■□□□□ 0.4
CPSF7-212ENST00000489728 FANCAO15360 1455 aa17.52■□□□□ 0.4
CPSF7-212ENST00000489728 PREX2Q70Z35 1606 aa17.51■□□□□ 0.39
CPSF7-212ENST00000489728 LRRC9Q6ZRR7 1453 aa17.48■□□□□ 0.39
CPSF7-212ENST00000489728 COL17A1Q9UMD9 1497 aaPredicted RBP17.48■□□□□ 0.39
CPSF7-212ENST00000489728 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
CPSF7-212ENST00000489728 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
CPSF7-212ENST00000489728 CDC42BPAQ5VT25 1732 aa17.47■□□□□ 0.39
CPSF7-212ENST00000489728 ARHGAP5Q13017 1502 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms