RNA–Protein interactions for RNA: ENST00000489207.1

ABCD4-213, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 379 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-213ENST00000489207 CHD1O14646 1710 aa13.4□□□□□ -0.26
ABCD4-213ENST00000489207 SYNJ2O15056 1496 aa13.38□□□□□ -0.27
ABCD4-213ENST00000489207 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
ABCD4-213ENST00000489207 PBRM1Q86U86 1689 aa13.37□□□□□ -0.27
ABCD4-213ENST00000489207 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
ABCD4-213ENST00000489207 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
ABCD4-213ENST00000489207 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
ABCD4-213ENST00000489207 CLIP1P30622 1438 aa13.36□□□□□ -0.27
ABCD4-213ENST00000489207 GRIN2AQ12879 1464 aa13.34□□□□□ -0.27
ABCD4-213ENST00000489207 KIAA0586Q9BVV6 1533 aa13.34□□□□□ -0.27
ABCD4-213ENST00000489207 FBLN2P98095 1184 aa13.33□□□□□ -0.28
ABCD4-213ENST00000489207 NUP160Q12769 1436 aa13.31□□□□□ -0.28
ABCD4-213ENST00000489207 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
ABCD4-213ENST00000489207 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
ABCD4-213ENST00000489207 EFCAB5A4FU69 1503 aa13.25□□□□□ -0.29
ABCD4-213ENST00000489207 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
ABCD4-213ENST00000489207 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
ABCD4-213ENST00000489207 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
ABCD4-213ENST00000489207 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
ABCD4-213ENST00000489207 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
ABCD4-213ENST00000489207 IQGAP2Q13576 1575 aa13.21□□□□□ -0.29
ABCD4-213ENST00000489207 FMN1Q68DA7 1419 aa13.19□□□□□ -0.3
ABCD4-213ENST00000489207 SAMD9Q5K651 1589 aa13.18□□□□□ -0.3
ABCD4-213ENST00000489207 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
ABCD4-213ENST00000489207 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
ABCD4-213ENST00000489207 CARMIL2Q6F5E8 1435 aa13.15□□□□□ -0.3
ABCD4-213ENST00000489207 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-213ENST00000489207 DISP1Q96F81 1524 aa13.14□□□□□ -0.31
ABCD4-213ENST00000489207 CASKIN1Q8WXD9 1431 aa13.13□□□□□ -0.31
ABCD4-213ENST00000489207 APLP2Q06481 763 aa13.12□□□□□ -0.31
ABCD4-213ENST00000489207 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
ABCD4-213ENST00000489207 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
ABCD4-213ENST00000489207 FHOD3Q2V2M9 1422 aa13.1□□□□□ -0.31
ABCD4-213ENST00000489207 SHROOM2Q13796 1616 aa13.08□□□□□ -0.32
ABCD4-213ENST00000489207 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
ABCD4-213ENST00000489207 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
ABCD4-213ENST00000489207 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
ABCD4-213ENST00000489207 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
ABCD4-213ENST00000489207 PTPRGP23470 1445 aa13.04□□□□□ -0.32
ABCD4-213ENST00000489207 KANK4Q5T7N3 995 aaPredicted RBP13□□□□□ -0.33
ABCD4-213ENST00000489207 CCDC18Q5T9S5 1454 aa12.98□□□□□ -0.33
ABCD4-213ENST00000489207 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-213ENST00000489207 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
ABCD4-213ENST00000489207 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
ABCD4-213ENST00000489207 KIF13AQ9H1H9 1805 aa12.95□□□□□ -0.34
ABCD4-213ENST00000489207 EPRSP07814 1512 aaKnown RBP12.95□□□□□ -0.34
ABCD4-213ENST00000489207 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
ABCD4-213ENST00000489207 UACAQ9BZF9 1416 aa12.95□□□□□ -0.34
ABCD4-213ENST00000489207 ABCA8O94911 1581 aa12.94□□□□□ -0.34
ABCD4-213ENST00000489207 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
ABCD4-213ENST00000489207 NUP153P49790 1475 aaKnown RBP12.93□□□□□ -0.34
ABCD4-213ENST00000489207 HECW1Q76N89 1606 aa12.93□□□□□ -0.34
ABCD4-213ENST00000489207 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
ABCD4-213ENST00000489207 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
ABCD4-213ENST00000489207 RAPGEF6Q8TEU7 1601 aa12.91□□□□□ -0.34
ABCD4-213ENST00000489207 ATP10BO94823 1461 aa12.91□□□□□ -0.34
ABCD4-213ENST00000489207 KDM4FA0A1W2PPD8 638 aa12.9□□□□□ -0.34
ABCD4-213ENST00000489207 PLEKHD1A6NEE1 506 aa12.9□□□□□ -0.34
ABCD4-213ENST00000489207 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-213ENST00000489207 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
ABCD4-213ENST00000489207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
ABCD4-213ENST00000489207 MTUS2Q5JR59 1369 aa12.89□□□□□ -0.35
ABCD4-213ENST00000489207 PCGF6Q9BYE7 350 aa12.88□□□□□ -0.35
ABCD4-213ENST00000489207 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
ABCD4-213ENST00000489207 CFAP43Q8NDM7 1665 aa12.87□□□□□ -0.35
ABCD4-213ENST00000489207 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
ABCD4-213ENST00000489207 KDM5BQ9UGL1 1544 aa12.85□□□□□ -0.35
ABCD4-213ENST00000489207 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
ABCD4-213ENST00000489207 TROQ12816 1431 aaPredicted RBP12.84□□□□□ -0.35
ABCD4-213ENST00000489207 FAM69CQ0P6D2 419 aa12.82□□□□□ -0.36
ABCD4-213ENST00000489207 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
ABCD4-213ENST00000489207 MIA2Q96PC5 1412 aa12.81□□□□□ -0.36
ABCD4-213ENST00000489207 LRRIQ1Q96JM4 1722 aa12.81□□□□□ -0.36
ABCD4-213ENST00000489207 MAGI3Q5TCQ9 1506 aa12.81□□□□□ -0.36
ABCD4-213ENST00000489207 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
ABCD4-213ENST00000489207 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
ABCD4-213ENST00000489207 NCOA2Q15596 1464 aa12.8□□□□□ -0.36
ABCD4-213ENST00000489207 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
ABCD4-213ENST00000489207 CDK13Q14004 1512 aaKnown RBP12.8□□□□□ -0.36
ABCD4-213ENST00000489207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
ABCD4-213ENST00000489207 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
ABCD4-213ENST00000489207 DIP2BQ9P265 1576 aa12.78□□□□□ -0.36
ABCD4-213ENST00000489207 MYOM3Q5VTT5 1437 aa12.78□□□□□ -0.36
ABCD4-213ENST00000489207 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
ABCD4-213ENST00000489207 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
ABCD4-213ENST00000489207 HRCP23327 699 aa12.76□□□□□ -0.37
ABCD4-213ENST00000489207 FGD6Q6ZV73 1430 aa12.75□□□□□ -0.37
ABCD4-213ENST00000489207 ADCY10Q96PN6 1610 aa12.75□□□□□ -0.37
ABCD4-213ENST00000489207 KDM6BO15054 1643 aa12.73□□□□□ -0.37
ABCD4-213ENST00000489207 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
ABCD4-213ENST00000489207 TCOF1Q13428 1488 aaKnown RBP12.73□□□□□ -0.37
ABCD4-213ENST00000489207 ARID3CA6NKF2 412 aa12.73□□□□□ -0.37
ABCD4-213ENST00000489207 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
ABCD4-213ENST00000489207 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
ABCD4-213ENST00000489207 TSPOAP1O95153 1857 aa12.71□□□□□ -0.37
ABCD4-213ENST00000489207 ACIN1Q9UKV3 1341 aaKnown RBP12.7□□□□□ -0.38
ABCD4-213ENST00000489207 CFDP1Q9UEE9 299 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-213ENST00000489207 WDR7Q9Y4E6 1490 aa12.67□□□□□ -0.38
ABCD4-213ENST00000489207 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
ABCD4-213ENST00000489207 PLCH2O75038 1416 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms