RNA–Protein interactions for RNA: ENST00000489207.1

ABCD4-213, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 379 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-213ENST00000489207 NISCHQ9Y2I1 1504 aa19.38■□□□□ 0.69
ABCD4-213ENST00000489207 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
ABCD4-213ENST00000489207 ABCC9O60706 1549 aa16.74■□□□□ 0.27
ABCD4-213ENST00000489207 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
ABCD4-213ENST00000489207 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
ABCD4-213ENST00000489207 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
ABCD4-213ENST00000489207 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
ABCD4-213ENST00000489207 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
ABCD4-213ENST00000489207 NACADO15069 1562 aa15.87■□□□□ 0.13
ABCD4-213ENST00000489207 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
ABCD4-213ENST00000489207 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
ABCD4-213ENST00000489207 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
ABCD4-213ENST00000489207 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
ABCD4-213ENST00000489207 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
ABCD4-213ENST00000489207 BICRAQ9NZM4 1560 aa15.33■□□□□ 0.05
ABCD4-213ENST00000489207 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
ABCD4-213ENST00000489207 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
ABCD4-213ENST00000489207 DNAJC5Q9H3Z4 198 aa14.99□□□□□ -0.01
ABCD4-213ENST00000489207 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
ABCD4-213ENST00000489207 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
ABCD4-213ENST00000489207 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
ABCD4-213ENST00000489207 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
ABCD4-213ENST00000489207 MROH2BQ7Z745 1585 aa14.89□□□□□ -0.03
ABCD4-213ENST00000489207 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
ABCD4-213ENST00000489207 PEG3Q9GZU2 1588 aa14.8□□□□□ -0.04
ABCD4-213ENST00000489207 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
ABCD4-213ENST00000489207 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
ABCD4-213ENST00000489207 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
ABCD4-213ENST00000489207 WIZO95785 1651 aa14.68□□□□□ -0.06
ABCD4-213ENST00000489207 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
ABCD4-213ENST00000489207 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
ABCD4-213ENST00000489207 BAZ1BQ9UIG0 1483 aaKnown RBP14.56□□□□□ -0.08
ABCD4-213ENST00000489207 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
ABCD4-213ENST00000489207 CUX2O14529 1486 aa14.46□□□□□ -0.09
ABCD4-213ENST00000489207 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
ABCD4-213ENST00000489207 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
ABCD4-213ENST00000489207 NESP48681 1621 aa14.32□□□□□ -0.12
ABCD4-213ENST00000489207 CFTRP13569 1480 aa14.3□□□□□ -0.12
ABCD4-213ENST00000489207 CADPSQ9ULU8 1353 aa14.29□□□□□ -0.12
ABCD4-213ENST00000489207 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
ABCD4-213ENST00000489207 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
ABCD4-213ENST00000489207 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
ABCD4-213ENST00000489207 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.15
ABCD4-213ENST00000489207 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
ABCD4-213ENST00000489207 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
ABCD4-213ENST00000489207 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
ABCD4-213ENST00000489207 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
ABCD4-213ENST00000489207 ABCC8Q09428 1581 aa14□□□□□ -0.17
ABCD4-213ENST00000489207 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
ABCD4-213ENST00000489207 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
ABCD4-213ENST00000489207 EEA1Q15075 1411 aa13.92□□□□□ -0.18
ABCD4-213ENST00000489207 CUX1P39880 1505 aa13.92□□□□□ -0.18
ABCD4-213ENST00000489207 BIVM-ERCC5R4GMW8 1640 aa13.91□□□□□ -0.18
ABCD4-213ENST00000489207 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
ABCD4-213ENST00000489207 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
ABCD4-213ENST00000489207 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
ABCD4-213ENST00000489207 WDR62O43379 1518 aa13.85□□□□□ -0.19
ABCD4-213ENST00000489207 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
ABCD4-213ENST00000489207 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
ABCD4-213ENST00000489207 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
ABCD4-213ENST00000489207 SOGA1O94964 1423 aa13.81□□□□□ -0.2
ABCD4-213ENST00000489207 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
ABCD4-213ENST00000489207 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.21
ABCD4-213ENST00000489207 KIF27Q86VH2 1401 aa13.77□□□□□ -0.21
ABCD4-213ENST00000489207 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
ABCD4-213ENST00000489207 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
ABCD4-213ENST00000489207 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
ABCD4-213ENST00000489207 IGF1RP08069 1367 aa13.72□□□□□ -0.21
ABCD4-213ENST00000489207 FAM9AQ8IZU1 332 aaPredicted RBP13.7□□□□□ -0.22
ABCD4-213ENST00000489207 RIMBP3CA6NJZ7 1639 aa13.69□□□□□ -0.22
ABCD4-213ENST00000489207 RIMBP3BA6NNM3 1639 aa13.69□□□□□ -0.22
ABCD4-213ENST00000489207 RIMBP3Q9UFD9 1639 aa13.69□□□□□ -0.22
ABCD4-213ENST00000489207 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
ABCD4-213ENST00000489207 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
ABCD4-213ENST00000489207 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
ABCD4-213ENST00000489207 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
ABCD4-213ENST00000489207 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
ABCD4-213ENST00000489207 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
ABCD4-213ENST00000489207 TNIKQ9UKE5 1360 aa13.62□□□□□ -0.23
ABCD4-213ENST00000489207 KIF21BO75037 1637 aa13.61□□□□□ -0.23
ABCD4-213ENST00000489207 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
ABCD4-213ENST00000489207 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
ABCD4-213ENST00000489207 ARHGEF11O15085 1522 aa13.6□□□□□ -0.23
ABCD4-213ENST00000489207 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
ABCD4-213ENST00000489207 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
ABCD4-213ENST00000489207 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
ABCD4-213ENST00000489207 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
ABCD4-213ENST00000489207 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
ABCD4-213ENST00000489207 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
ABCD4-213ENST00000489207 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
ABCD4-213ENST00000489207 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
ABCD4-213ENST00000489207 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
ABCD4-213ENST00000489207 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.24
ABCD4-213ENST00000489207 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
ABCD4-213ENST00000489207 CUL7Q14999 1698 aa13.49□□□□□ -0.25
ABCD4-213ENST00000489207 ARAP1Q96P48 1450 aa13.47□□□□□ -0.25
ABCD4-213ENST00000489207 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
ABCD4-213ENST00000489207 MAGI1Q96QZ7 1491 aaPredicted RBP13.45□□□□□ -0.26
ABCD4-213ENST00000489207 EIF4G3O43432 1585 aaKnown RBP13.43□□□□□ -0.26
ABCD4-213ENST00000489207 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms