RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 GRIN2AQ12879 1464 aa18.48■□□□□ 0.55
CMSS1-205ENST00000489081 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
CMSS1-205ENST00000489081 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
CMSS1-205ENST00000489081 FBLN2P98095 1184 aa18.44■□□□□ 0.54
CMSS1-205ENST00000489081 CLIP1P30622 1438 aa18.4■□□□□ 0.54
CMSS1-205ENST00000489081 NUP160Q12769 1436 aa18.39■□□□□ 0.53
CMSS1-205ENST00000489081 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
CMSS1-205ENST00000489081 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
CMSS1-205ENST00000489081 CEP170Q5SW79 1584 aa18.36■□□□□ 0.53
CMSS1-205ENST00000489081 KIAA0586Q9BVV6 1533 aa18.36■□□□□ 0.53
CMSS1-205ENST00000489081 CHD1O14646 1710 aa18.32■□□□□ 0.52
CMSS1-205ENST00000489081 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
CMSS1-205ENST00000489081 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
CMSS1-205ENST00000489081 EFCAB5A4FU69 1503 aa18.26■□□□□ 0.51
CMSS1-205ENST00000489081 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
CMSS1-205ENST00000489081 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
CMSS1-205ENST00000489081 JPH4Q96JJ6 628 aa18.23■□□□□ 0.51
CMSS1-205ENST00000489081 SAMD9Q5K651 1589 aa18.22■□□□□ 0.51
CMSS1-205ENST00000489081 P3H3Q8IVL6 736 aa18.2■□□□□ 0.5
CMSS1-205ENST00000489081 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
CMSS1-205ENST00000489081 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
CMSS1-205ENST00000489081 FHOD3Q2V2M9 1422 aa18.19■□□□□ 0.5
CMSS1-205ENST00000489081 DISP1Q96F81 1524 aa18.18■□□□□ 0.5
CMSS1-205ENST00000489081 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
CMSS1-205ENST00000489081 KIAA0556O60303 1618 aa18.14■□□□□ 0.49
CMSS1-205ENST00000489081 CARMIL2Q6F5E8 1435 aa18.13■□□□□ 0.49
CMSS1-205ENST00000489081 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
CMSS1-205ENST00000489081 PRG4Q92954 1404 aaPredicted RBP18.12■□□□□ 0.49
CMSS1-205ENST00000489081 FMN1Q68DA7 1419 aa18.1■□□□□ 0.49
CMSS1-205ENST00000489081 CASKIN1Q8WXD9 1431 aa18.04■□□□□ 0.48
CMSS1-205ENST00000489081 FYCO1Q9BQS8 1478 aa18.02■□□□□ 0.48
CMSS1-205ENST00000489081 PCF11O94913 1555 aaKnown RBP18.02■□□□□ 0.48
CMSS1-205ENST00000489081 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
CMSS1-205ENST00000489081 TTBK1Q5TCY1 1321 aaPredicted RBP17.99■□□□□ 0.47
CMSS1-205ENST00000489081 PTPRGP23470 1445 aa17.98■□□□□ 0.47
CMSS1-205ENST00000489081 APLP2Q06481 763 aa17.98■□□□□ 0.47
CMSS1-205ENST00000489081 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
CMSS1-205ENST00000489081 MAP3K1Q13233 1512 aa17.94■□□□□ 0.46
CMSS1-205ENST00000489081 PLB1Q6P1J6 1458 aa17.94■□□□□ 0.46
CMSS1-205ENST00000489081 ABCA8O94911 1581 aa17.92■□□□□ 0.46
CMSS1-205ENST00000489081 RAPGEF6Q8TEU7 1601 aa17.92■□□□□ 0.46
CMSS1-205ENST00000489081 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
CMSS1-205ENST00000489081 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
CMSS1-205ENST00000489081 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
CMSS1-205ENST00000489081 NUP153P49790 1475 aaKnown RBP17.9■□□□□ 0.46
CMSS1-205ENST00000489081 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
CMSS1-205ENST00000489081 ADRA2BP18089 450 aa17.89■□□□□ 0.45
CMSS1-205ENST00000489081 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
CMSS1-205ENST00000489081 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
CMSS1-205ENST00000489081 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
CMSS1-205ENST00000489081 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
CMSS1-205ENST00000489081 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
CMSS1-205ENST00000489081 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
CMSS1-205ENST00000489081 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
CMSS1-205ENST00000489081 ARHGEF11O15085 1522 aa17.84■□□□□ 0.45
CMSS1-205ENST00000489081 LRRC9Q6ZRR7 1453 aa17.84■□□□□ 0.45
CMSS1-205ENST00000489081 CDK13Q14004 1512 aaKnown RBP17.83■□□□□ 0.45
CMSS1-205ENST00000489081 ARID3CA6NKF2 412 aa17.83■□□□□ 0.44
CMSS1-205ENST00000489081 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
CMSS1-205ENST00000489081 UHRF1BP1LA0JNW5 1464 aa17.82■□□□□ 0.44
CMSS1-205ENST00000489081 MSH5O43196 834 aa17.81■□□□□ 0.44
CMSS1-205ENST00000489081 ATP10BO94823 1461 aa17.8■□□□□ 0.44
CMSS1-205ENST00000489081 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
CMSS1-205ENST00000489081 MAGI3Q5TCQ9 1506 aa17.77■□□□□ 0.43
CMSS1-205ENST00000489081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
CMSS1-205ENST00000489081 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
CMSS1-205ENST00000489081 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
CMSS1-205ENST00000489081 EHBP1L1Q8N3D4 1523 aa17.75■□□□□ 0.43
CMSS1-205ENST00000489081 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
CMSS1-205ENST00000489081 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
CMSS1-205ENST00000489081 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
CMSS1-205ENST00000489081 KDM5BQ9UGL1 1544 aa17.73■□□□□ 0.43
CMSS1-205ENST00000489081 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
CMSS1-205ENST00000489081 ADCY10Q96PN6 1610 aa17.72■□□□□ 0.43
CMSS1-205ENST00000489081 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.43
CMSS1-205ENST00000489081 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
CMSS1-205ENST00000489081 CYB5RLQ6IPT4 315 aa17.67■□□□□ 0.42
CMSS1-205ENST00000489081 NCOA2Q15596 1464 aa17.67■□□□□ 0.42
CMSS1-205ENST00000489081 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
CMSS1-205ENST00000489081 ZCCHC11Q5TAX3 1644 aaKnown RBP17.66■□□□□ 0.42
CMSS1-205ENST00000489081 SUPT6HQ7KZ85 1726 aaKnown RBP17.65■□□□□ 0.42
CMSS1-205ENST00000489081 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
CMSS1-205ENST00000489081 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
CMSS1-205ENST00000489081 NPM1P06748 294 aaKnown RBP eCLIP17.61■□□□□ 0.41
CMSS1-205ENST00000489081 KIF14Q15058 1648 aa17.58■□□□□ 0.41
CMSS1-205ENST00000489081 MYOM3Q5VTT5 1437 aa17.58■□□□□ 0.41
CMSS1-205ENST00000489081 ABCC10Q5T3U5 1492 aa17.57■□□□□ 0.4
CMSS1-205ENST00000489081 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
CMSS1-205ENST00000489081 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
CMSS1-205ENST00000489081 FGD6Q6ZV73 1430 aa17.56■□□□□ 0.4
CMSS1-205ENST00000489081 ASXL2Q76L83 1435 aa17.56■□□□□ 0.4
CMSS1-205ENST00000489081 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
CMSS1-205ENST00000489081 MIA2Q96PC5 1412 aa17.53■□□□□ 0.4
CMSS1-205ENST00000489081 GPATCH8Q9UKJ3 1502 aaKnown RBP17.52■□□□□ 0.4
CMSS1-205ENST00000489081 DNAJC5Q9H3Z4 198 aa17.51■□□□□ 0.39
CMSS1-205ENST00000489081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.51■□□□□ 0.39
CMSS1-205ENST00000489081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.51■□□□□ 0.39
CMSS1-205ENST00000489081 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
CMSS1-205ENST00000489081 FAM50AQ14320 339 aaKnown RBP17.48■□□□□ 0.39
CMSS1-205ENST00000489081 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms