RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 NISCHQ9Y2I1 1504 aa26.73■■□□□ 1.87
CMSS1-205ENST00000489081 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
CMSS1-205ENST00000489081 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
CMSS1-205ENST00000489081 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
CMSS1-205ENST00000489081 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
CMSS1-205ENST00000489081 ABCC9O60706 1549 aa22.39■■□□□ 1.17
CMSS1-205ENST00000489081 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
CMSS1-205ENST00000489081 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
CMSS1-205ENST00000489081 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
CMSS1-205ENST00000489081 NACADO15069 1562 aa21.9■■□□□ 1.1
CMSS1-205ENST00000489081 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
CMSS1-205ENST00000489081 SHROOM4Q9ULL8 1493 aa21.55■■□□□ 1.04
CMSS1-205ENST00000489081 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
CMSS1-205ENST00000489081 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
CMSS1-205ENST00000489081 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
CMSS1-205ENST00000489081 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
CMSS1-205ENST00000489081 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
CMSS1-205ENST00000489081 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
CMSS1-205ENST00000489081 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
CMSS1-205ENST00000489081 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
CMSS1-205ENST00000489081 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
CMSS1-205ENST00000489081 SMARCA4P51532 1647 aa20.58■□□□□ 0.89
CMSS1-205ENST00000489081 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
CMSS1-205ENST00000489081 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
CMSS1-205ENST00000489081 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
CMSS1-205ENST00000489081 WIZO95785 1651 aa20.4■□□□□ 0.86
CMSS1-205ENST00000489081 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
CMSS1-205ENST00000489081 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
CMSS1-205ENST00000489081 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
CMSS1-205ENST00000489081 CC2D2AQ9P2K1 1620 aa20.24■□□□□ 0.83
CMSS1-205ENST00000489081 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
CMSS1-205ENST00000489081 TOP2AP11388 1531 aaKnown RBP20.23■□□□□ 0.83
CMSS1-205ENST00000489081 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
CMSS1-205ENST00000489081 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
CMSS1-205ENST00000489081 DNAJC5BQ9UF47 199 aa20.02■□□□□ 0.8
CMSS1-205ENST00000489081 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
CMSS1-205ENST00000489081 CFTRP13569 1480 aa19.7■□□□□ 0.74
CMSS1-205ENST00000489081 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
CMSS1-205ENST00000489081 NESP48681 1621 aa19.56■□□□□ 0.72
CMSS1-205ENST00000489081 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
CMSS1-205ENST00000489081 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
CMSS1-205ENST00000489081 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
CMSS1-205ENST00000489081 FANCD2Q9BXW9 1451 aa19.46■□□□□ 0.71
CMSS1-205ENST00000489081 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
CMSS1-205ENST00000489081 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
CMSS1-205ENST00000489081 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
CMSS1-205ENST00000489081 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
CMSS1-205ENST00000489081 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
CMSS1-205ENST00000489081 CUX1P39880 1505 aa19.3■□□□□ 0.68
CMSS1-205ENST00000489081 TOP2BQ02880 1626 aa19.28■□□□□ 0.68
CMSS1-205ENST00000489081 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
CMSS1-205ENST00000489081 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
CMSS1-205ENST00000489081 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
CMSS1-205ENST00000489081 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
CMSS1-205ENST00000489081 DNMBPQ6XZF7 1577 aa19.22■□□□□ 0.67
CMSS1-205ENST00000489081 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
CMSS1-205ENST00000489081 MRC2Q9UBG0 1479 aa19.2■□□□□ 0.66
CMSS1-205ENST00000489081 FGD5Q6ZNL6 1462 aa19.14■□□□□ 0.65
CMSS1-205ENST00000489081 WDR62O43379 1518 aa19.1■□□□□ 0.65
CMSS1-205ENST00000489081 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
CMSS1-205ENST00000489081 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
CMSS1-205ENST00000489081 SOGA1O94964 1423 aa19.07■□□□□ 0.64
CMSS1-205ENST00000489081 FOXD1Q16676 465 aa19.06■□□□□ 0.64
CMSS1-205ENST00000489081 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.63
CMSS1-205ENST00000489081 EEA1Q15075 1411 aa19.01■□□□□ 0.63
CMSS1-205ENST00000489081 FAM9AQ8IZU1 332 aaPredicted RBP19.01■□□□□ 0.63
CMSS1-205ENST00000489081 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
CMSS1-205ENST00000489081 CUX2O14529 1486 aa18.98■□□□□ 0.63
CMSS1-205ENST00000489081 ABCA10Q8WWZ4 1543 aa18.98■□□□□ 0.63
CMSS1-205ENST00000489081 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
CMSS1-205ENST00000489081 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
CMSS1-205ENST00000489081 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
CMSS1-205ENST00000489081 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
CMSS1-205ENST00000489081 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
CMSS1-205ENST00000489081 WDR97A6NE52 1622 aa18.89■□□□□ 0.62
CMSS1-205ENST00000489081 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
CMSS1-205ENST00000489081 IGF1RP08069 1367 aa18.83■□□□□ 0.61
CMSS1-205ENST00000489081 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
CMSS1-205ENST00000489081 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
CMSS1-205ENST00000489081 GAPVD1Q14C86 1478 aa18.81■□□□□ 0.6
CMSS1-205ENST00000489081 ZNF608Q9ULD9 1512 aaPredicted RBP18.8■□□□□ 0.6
CMSS1-205ENST00000489081 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.6
CMSS1-205ENST00000489081 PRXQ9BXM0 1461 aa18.77■□□□□ 0.59
CMSS1-205ENST00000489081 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
CMSS1-205ENST00000489081 KIF21BO75037 1637 aa18.74■□□□□ 0.59
CMSS1-205ENST00000489081 GRIN2BQ13224 1484 aa18.72■□□□□ 0.59
CMSS1-205ENST00000489081 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
CMSS1-205ENST00000489081 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
CMSS1-205ENST00000489081 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
CMSS1-205ENST00000489081 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
CMSS1-205ENST00000489081 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
CMSS1-205ENST00000489081 CUL7Q14999 1698 aa18.66■□□□□ 0.58
CMSS1-205ENST00000489081 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
CMSS1-205ENST00000489081 FHAD1B1AJZ9 1412 aa18.63■□□□□ 0.57
CMSS1-205ENST00000489081 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
CMSS1-205ENST00000489081 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
CMSS1-205ENST00000489081 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
CMSS1-205ENST00000489081 ADAMTS12P58397 1594 aa18.6■□□□□ 0.57
CMSS1-205ENST00000489081 MAGI1Q96QZ7 1491 aaPredicted RBP18.59■□□□□ 0.57
CMSS1-205ENST00000489081 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms