RNA–Protein interactions for RNA: ENST00000488687.5

PSME4-209, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 3,073 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-209ENST00000488687 DNMBPQ6XZF7 1577 aa9.6□□□□□ -0.87
PSME4-209ENST00000488687 RANGAP1P46060 587 aaPredicted RBP9.59□□□□□ -0.87
PSME4-209ENST00000488687 URB2Q14146 1524 aaKnown RBP9.58□□□□□ -0.88
PSME4-209ENST00000488687 TOPBP1Q92547 1522 aa9.58□□□□□ -0.88
PSME4-209ENST00000488687 ERICH3Q5RHP9 1530 aa9.57□□□□□ -0.88
PSME4-209ENST00000488687 PRXQ9BXM0 1461 aa9.57□□□□□ -0.88
PSME4-209ENST00000488687 CLIP1P30622 1438 aa9.57□□□□□ -0.88
PSME4-209ENST00000488687 HOXD11P31277 338 aaPredicted RBP9.55□□□□□ -0.88
PSME4-209ENST00000488687 POLA1P09884 1462 aaPredicted RBP9.54□□□□□ -0.88
PSME4-209ENST00000488687 RAD54L2Q9Y4B4 1467 aa9.54□□□□□ -0.88
PSME4-209ENST00000488687 TTBK1Q5TCY1 1321 aaPredicted RBP9.53□□□□□ -0.88
PSME4-209ENST00000488687 IGF1RP08069 1367 aa9.53□□□□□ -0.88
PSME4-209ENST00000488687 HRCP23327 699 aa9.52□□□□□ -0.89
PSME4-209ENST00000488687 CARMIL1Q5VZK9 1371 aa9.51□□□□□ -0.89
PSME4-209ENST00000488687 APLP2Q06481 763 aa9.51□□□□□ -0.89
PSME4-209ENST00000488687 DMRT2Q9Y5R5 561 aa9.51□□□□□ -0.89
PSME4-209ENST00000488687 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
PSME4-209ENST00000488687 OSCARQ8IYS5 282 aa9.5□□□□□ -0.89
PSME4-209ENST00000488687 ILDR1Q86SU0 546 aaPredicted RBP9.5□□□□□ -0.89
PSME4-209ENST00000488687 RIMBP3CA6NJZ7 1639 aa9.49□□□□□ -0.89
PSME4-209ENST00000488687 RIMBP3BA6NNM3 1639 aa9.49□□□□□ -0.89
PSME4-209ENST00000488687 RIMBP3Q9UFD9 1639 aa9.49□□□□□ -0.89
PSME4-209ENST00000488687 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
PSME4-209ENST00000488687 ZNF608Q9ULD9 1512 aaPredicted RBP9.48□□□□□ -0.89
PSME4-209ENST00000488687 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.9
PSME4-209ENST00000488687 IFT140Q96RY7 1462 aa9.45□□□□□ -0.9
PSME4-209ENST00000488687 TDRD9Q8NDG6 1382 aaKnown RBP9.45□□□□□ -0.9
PSME4-209ENST00000488687 CUL7Q14999 1698 aa9.44□□□□□ -0.9
PSME4-209ENST00000488687 GAPVD1Q14C86 1478 aa9.43□□□□□ -0.9
PSME4-209ENST00000488687 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
PSME4-209ENST00000488687 ARHGEF11O15085 1522 aa9.43□□□□□ -0.9
PSME4-209ENST00000488687 SOCS7O14512 581 aa9.43□□□□□ -0.9
PSME4-209ENST00000488687 CHD1O14646 1710 aa9.42□□□□□ -0.9
PSME4-209ENST00000488687 ARAP1Q96P48 1450 aa9.42□□□□□ -0.9
PSME4-209ENST00000488687 ABCA5Q8WWZ7 1642 aa9.41□□□□□ -0.9
PSME4-209ENST00000488687 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
PSME4-209ENST00000488687 ARHGAP35Q9NRY4 1499 aa9.4□□□□□ -0.91
PSME4-209ENST00000488687 FKBP8Q14318 412 aa9.39□□□□□ -0.91
PSME4-209ENST00000488687 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
PSME4-209ENST00000488687 P3H3Q8IVL6 736 aa9.36□□□□□ -0.91
PSME4-209ENST00000488687 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.911e-6■■■■□ 19.8
PSME4-209ENST00000488687 CTTNBP2Q8WZ74 1663 aa9.36□□□□□ -0.91
PSME4-209ENST00000488687 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
PSME4-209ENST00000488687 PBRM1Q86U86 1689 aa9.35□□□□□ -0.91
PSME4-209ENST00000488687 ATXN8OSP0DMR3 200 aa9.35□□□□□ -0.91
PSME4-209ENST00000488687 ATP1B4Q9UN42 357 aaPredicted RBP9.34□□□□□ -0.91
PSME4-209ENST00000488687 GRIN2BQ13224 1484 aa9.33□□□□□ -0.92
PSME4-209ENST00000488687 FHAD1B1AJZ9 1412 aa9.33□□□□□ -0.92
PSME4-209ENST00000488687 EFCAB5A4FU69 1503 aa9.32□□□□□ -0.92
PSME4-209ENST00000488687 ATF5Q9Y2D1 282 aaPredicted RBP9.32□□□□□ -0.92
PSME4-209ENST00000488687 CCER1Q8TC90 406 aaPredicted RBP9.32□□□□□ -0.92
PSME4-209ENST00000488687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.31□□□□□ -0.92
PSME4-209ENST00000488687 KANK4Q5T7N3 995 aaPredicted RBP9.31□□□□□ -0.92
PSME4-209ENST00000488687 CYB5RLQ6IPT4 315 aa9.31□□□□□ -0.92
PSME4-209ENST00000488687 HNRNPUL2Q1KMD3 747 aaKnown RBP9.3□□□□□ -0.92
PSME4-209ENST00000488687 FHOD3Q2V2M9 1422 aa9.3□□□□□ -0.92
PSME4-209ENST00000488687 FBLN2P98095 1184 aa9.29□□□□□ -0.92
PSME4-209ENST00000488687 ADAMTS12P58397 1594 aa9.29□□□□□ -0.92
PSME4-209ENST00000488687 SNAPC4Q5SXM2 1469 aa9.28□□□□□ -0.92
PSME4-209ENST00000488687 FMN1Q68DA7 1419 aa9.27□□□□□ -0.93
PSME4-209ENST00000488687 CLASP1Q7Z460 1538 aa9.27□□□□□ -0.93
PSME4-209ENST00000488687 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
PSME4-209ENST00000488687 PCF11O94913 1555 aaKnown RBP9.26□□□□□ -0.93
PSME4-209ENST00000488687 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
PSME4-209ENST00000488687 FYCO1Q9BQS8 1478 aa9.25□□□□□ -0.93
PSME4-209ENST00000488687 CHMP7Q8WUX9 453 aaPredicted RBP9.25□□□□□ -0.93
PSME4-209ENST00000488687 CASKIN1Q8WXD9 1431 aa9.25□□□□□ -0.93
PSME4-209ENST00000488687 IQGAP2Q13576 1575 aa9.24□□□□□ -0.93
PSME4-209ENST00000488687 TRHP20396 242 aaPredicted RBP9.24□□□□□ -0.93
PSME4-209ENST00000488687 SAMD9Q5K651 1589 aa9.24□□□□□ -0.93
PSME4-209ENST00000488687 KDM6BO15054 1643 aa9.24□□□□□ -0.93
PSME4-209ENST00000488687 MAGI1Q96QZ7 1491 aaPredicted RBP9.23□□□□□ -0.93
PSME4-209ENST00000488687 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
PSME4-209ENST00000488687 CFAP43Q8NDM7 1665 aa9.22□□□□□ -0.93
PSME4-209ENST00000488687 GRIN2AQ12879 1464 aa9.21□□□□□ -0.93
PSME4-209ENST00000488687 SYNJ2O15056 1496 aa9.21□□□□□ -0.94
PSME4-209ENST00000488687 CCNB3Q8WWL7 1395 aa9.2□□□□□ -0.94
PSME4-209ENST00000488687 RRBP1Q9P2E9 1410 aaKnown RBP9.2□□□□□ -0.94
PSME4-209ENST00000488687 ITGAEP38570 1179 aa9.2□□□□□ -0.94
PSME4-209ENST00000488687 KIAA0586Q9BVV6 1533 aa9.19□□□□□ -0.94
PSME4-209ENST00000488687 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
PSME4-209ENST00000488687 UGGT2Q9NYU1 1516 aa9.17□□□□□ -0.94
PSME4-209ENST00000488687 FAM50AQ14320 339 aaKnown RBP9.17□□□□□ -0.94
PSME4-209ENST00000488687 PHLDB1Q86UU1 1377 aa9.15□□□□□ -0.94
PSME4-209ENST00000488687 POTEDQ86YR6 584 aa9.15□□□□□ -0.94
PSME4-209ENST00000488687 HECW1Q76N89 1606 aa9.15□□□□□ -0.94
PSME4-209ENST00000488687 FBXO41Q8TF61 875 aa9.15□□□□□ -0.95
PSME4-209ENST00000488687 CCDC18Q5T9S5 1454 aa9.14□□□□□ -0.95
PSME4-209ENST00000488687 CEP170Q5SW79 1584 aa9.14□□□□□ -0.95
PSME4-209ENST00000488687 KIAA0556O60303 1618 aa9.14□□□□□ -0.95
PSME4-209ENST00000488687 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
PSME4-209ENST00000488687 LRRIQ1Q96JM4 1722 aa9.13□□□□□ -0.95
PSME4-209ENST00000488687 DISP1Q96F81 1524 aa9.12□□□□□ -0.95
PSME4-209ENST00000488687 CARMIL2Q6F5E8 1435 aa9.12□□□□□ -0.95
PSME4-209ENST00000488687 JPH4Q96JJ6 628 aa9.12□□□□□ -0.95
PSME4-209ENST00000488687 NUP160Q12769 1436 aa9.11□□□□□ -0.95
PSME4-209ENST00000488687 EHBP1L1Q8N3D4 1523 aa9.11□□□□□ -0.95
PSME4-209ENST00000488687 SUPT6HQ7KZ85 1726 aaKnown RBP9.11□□□□□ -0.95
PSME4-209ENST00000488687 EPRSP07814 1512 aaKnown RBP9.1□□□□□ -0.95
PSME4-209ENST00000488687 LMTK3Q96Q04 1460 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms