RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
VAMP7-206ENST00000488344 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
VAMP7-206ENST00000488344 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
VAMP7-206ENST00000488344 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
VAMP7-206ENST00000488344 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
VAMP7-206ENST00000488344 KIF27Q86VH2 1401 aa19.6■□□□□ 0.73
VAMP7-206ENST00000488344 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
VAMP7-206ENST00000488344 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
VAMP7-206ENST00000488344 RUSC2Q8N2Y8 1516 aa19.54■□□□□ 0.72
VAMP7-206ENST00000488344 IGF1RP08069 1367 aa19.53■□□□□ 0.72
VAMP7-206ENST00000488344 CUL7Q14999 1698 aa19.52■□□□□ 0.71
VAMP7-206ENST00000488344 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
VAMP7-206ENST00000488344 KIAA0586Q9BVV6 1533 aa19.5■□□□□ 0.71
VAMP7-206ENST00000488344 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
VAMP7-206ENST00000488344 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
VAMP7-206ENST00000488344 ADRA2BP18089 450 aa19.39■□□□□ 0.69
VAMP7-206ENST00000488344 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
VAMP7-206ENST00000488344 CARMIL2Q6F5E8 1435 aa19.35■□□□□ 0.69
VAMP7-206ENST00000488344 ABCC10Q5T3U5 1492 aa19.33■□□□□ 0.68
VAMP7-206ENST00000488344 PTPRGP23470 1445 aa19.32■□□□□ 0.68
VAMP7-206ENST00000488344 ADCY10Q96PN6 1610 aa19.3■□□□□ 0.68
VAMP7-206ENST00000488344 FAM69CQ0P6D2 419 aa19.3■□□□□ 0.68
VAMP7-206ENST00000488344 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
VAMP7-206ENST00000488344 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
VAMP7-206ENST00000488344 RAPGEF2Q9Y4G8 1499 aa19.27■□□□□ 0.67
VAMP7-206ENST00000488344 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
VAMP7-206ENST00000488344 DIP2BQ9P265 1576 aa19.23■□□□□ 0.67
VAMP7-206ENST00000488344 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
VAMP7-206ENST00000488344 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
VAMP7-206ENST00000488344 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
VAMP7-206ENST00000488344 UGGT2Q9NYU1 1516 aa19.17■□□□□ 0.66
VAMP7-206ENST00000488344 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
VAMP7-206ENST00000488344 DISP1Q96F81 1524 aa19.16■□□□□ 0.66
VAMP7-206ENST00000488344 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
VAMP7-206ENST00000488344 ASXL2Q76L83 1435 aa19.12■□□□□ 0.65
VAMP7-206ENST00000488344 KIAA0556O60303 1618 aa19.09■□□□□ 0.65
VAMP7-206ENST00000488344 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
VAMP7-206ENST00000488344 KDM6BO15054 1643 aa19.08■□□□□ 0.65
VAMP7-206ENST00000488344 KDM5BQ9UGL1 1544 aa19.07■□□□□ 0.64
VAMP7-206ENST00000488344 GLI2P10070 1586 aa19.06■□□□□ 0.64
VAMP7-206ENST00000488344 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
VAMP7-206ENST00000488344 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
VAMP7-206ENST00000488344 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
VAMP7-206ENST00000488344 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
VAMP7-206ENST00000488344 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
VAMP7-206ENST00000488344 TSPOAP1O95153 1857 aa18.97■□□□□ 0.63
VAMP7-206ENST00000488344 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
VAMP7-206ENST00000488344 WDR7Q9Y4E6 1490 aa18.96■□□□□ 0.63
VAMP7-206ENST00000488344 EEA1Q15075 1411 aa18.93■□□□□ 0.62
VAMP7-206ENST00000488344 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
VAMP7-206ENST00000488344 ABCA8O94911 1581 aa18.92■□□□□ 0.62
VAMP7-206ENST00000488344 MAP3K4Q9Y6R4 1608 aa18.91■□□□□ 0.62
VAMP7-206ENST00000488344 PPRC1Q5VV67 1664 aaKnown RBP18.89■□□□□ 0.61
VAMP7-206ENST00000488344 CD109Q6YHK3 1445 aa18.84■□□□□ 0.61
VAMP7-206ENST00000488344 KDM4FA0A1W2PPD8 638 aa18.83■□□□□ 0.6
VAMP7-206ENST00000488344 MAGI3Q5TCQ9 1506 aa18.83■□□□□ 0.6
VAMP7-206ENST00000488344 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
VAMP7-206ENST00000488344 COL17A1Q9UMD9 1497 aaPredicted RBP18.8■□□□□ 0.6
VAMP7-206ENST00000488344 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
VAMP7-206ENST00000488344 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
VAMP7-206ENST00000488344 SAMD9Q5K651 1589 aa18.78■□□□□ 0.6
VAMP7-206ENST00000488344 ATP10BO94823 1461 aa18.76■□□□□ 0.59
VAMP7-206ENST00000488344 ADGRL1O94910 1474 aa18.73■□□□□ 0.59
VAMP7-206ENST00000488344 PHLDB1Q86UU1 1377 aa18.72■□□□□ 0.59
VAMP7-206ENST00000488344 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
VAMP7-206ENST00000488344 RAPGEF6Q8TEU7 1601 aa18.71■□□□□ 0.59
VAMP7-206ENST00000488344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
VAMP7-206ENST00000488344 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
VAMP7-206ENST00000488344 KIF21BO75037 1637 aa18.68■□□□□ 0.58
VAMP7-206ENST00000488344 EFCAB5A4FU69 1503 aa18.68■□□□□ 0.58
VAMP7-206ENST00000488344 ARAP3Q8WWN8 1544 aa18.67■□□□□ 0.58
VAMP7-206ENST00000488344 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
VAMP7-206ENST00000488344 RANGAP1P46060 587 aaPredicted RBP18.66■□□□□ 0.58
VAMP7-206ENST00000488344 ABCA9Q8IUA7 1624 aa18.66■□□□□ 0.58
VAMP7-206ENST00000488344 NUP153P49790 1475 aaKnown RBP18.65■□□□□ 0.58
VAMP7-206ENST00000488344 NEO1Q92859 1461 aa18.63■□□□□ 0.57
VAMP7-206ENST00000488344 PLEKHD1A6NEE1 506 aa18.62■□□□□ 0.57
VAMP7-206ENST00000488344 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
VAMP7-206ENST00000488344 FMN1Q68DA7 1419 aa18.54■□□□□ 0.56
VAMP7-206ENST00000488344 RAPGEF3O95398 923 aa18.51■□□□□ 0.55
VAMP7-206ENST00000488344 CFAP74Q9C0B2 1584 aa18.5■□□□□ 0.55
VAMP7-206ENST00000488344 DENND4BO75064 1496 aaPredicted RBP18.49■□□□□ 0.55
VAMP7-206ENST00000488344 FANCAO15360 1455 aa18.48■□□□□ 0.55
VAMP7-206ENST00000488344 CDK11AQ9UQ88 783 aaPredicted RBP18.48■□□□□ 0.55
VAMP7-206ENST00000488344 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
VAMP7-206ENST00000488344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.46■□□□□ 0.55
VAMP7-206ENST00000488344 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
VAMP7-206ENST00000488344 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
VAMP7-206ENST00000488344 ARHGAP35Q9NRY4 1499 aa18.45■□□□□ 0.54
VAMP7-206ENST00000488344 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
VAMP7-206ENST00000488344 FRMPD1Q5SYB0 1578 aa18.44■□□□□ 0.54
VAMP7-206ENST00000488344 HECW2Q9P2P5 1572 aa18.44■□□□□ 0.54
VAMP7-206ENST00000488344 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
VAMP7-206ENST00000488344 ARID4BQ4LE39 1312 aaPredicted RBP18.43■□□□□ 0.54
VAMP7-206ENST00000488344 TTC37Q6PGP7 1564 aa18.42■□□□□ 0.54
VAMP7-206ENST00000488344 ARHGEF40Q8TER5 1519 aa18.41■□□□□ 0.54
VAMP7-206ENST00000488344 PLCH2O75038 1416 aa18.4■□□□□ 0.54
VAMP7-206ENST00000488344 CLIP1P30622 1438 aa18.39■□□□□ 0.53
VAMP7-206ENST00000488344 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.53
VAMP7-206ENST00000488344 ZMYM4Q5VZL5 1548 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms