RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
TOM1-214ENST00000487670 ADCY10Q96PN6 1610 aa29.94■■■□□ 2.38
TOM1-214ENST00000487670 ABCC10Q5T3U5 1492 aa29.92■■■□□ 2.38
TOM1-214ENST00000487670 MAPKBP1O60336 1514 aa29.86■■■□□ 2.37
TOM1-214ENST00000487670 KDM6BO15054 1643 aa29.85■■■□□ 2.37
TOM1-214ENST00000487670 FAM69CQ0P6D2 419 aa29.85■■■□□ 2.37
TOM1-214ENST00000487670 KDM4FA0A1W2PPD8 638 aa29.82■■■□□ 2.36
TOM1-214ENST00000487670 JPH4Q96JJ6 628 aa29.81■■■□□ 2.36
TOM1-214ENST00000487670 SUPT5HO00267 1087 aaKnown RBP29.66■■■□□ 2.34
TOM1-214ENST00000487670 PPRC1Q5VV67 1664 aaKnown RBP29.66■■■□□ 2.34
TOM1-214ENST00000487670 ILDR1Q86SU0 546 aaPredicted RBP29.63■■■□□ 2.33
TOM1-214ENST00000487670 NPM1P06748 294 aaKnown RBP eCLIP29.6■■■□□ 2.33
TOM1-214ENST00000487670 KIAA0586Q9BVV6 1533 aa29.51■■■□□ 2.32
TOM1-214ENST00000487670 CUL7Q14999 1698 aa29.51■■■□□ 2.31
TOM1-214ENST00000487670 ADGRL1O94910 1474 aa29.45■■■□□ 2.31
TOM1-214ENST00000487670 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
TOM1-214ENST00000487670 GLI2P10070 1586 aa29.37■■■□□ 2.29
TOM1-214ENST00000487670 IGF1RP08069 1367 aa29.37■■■□□ 2.29
TOM1-214ENST00000487670 ABCC2Q92887 1545 aa29.36■■■□□ 2.29
TOM1-214ENST00000487670 HECW2Q9P2P5 1572 aa29.36■■■□□ 2.29
TOM1-214ENST00000487670 ASXL2Q76L83 1435 aa29.36■■■□□ 2.29
TOM1-214ENST00000487670 COL17A1Q9UMD9 1497 aaPredicted RBP29.36■■■□□ 2.29
TOM1-214ENST00000487670 PTPRGP23470 1445 aa29.34■■■□□ 2.29
TOM1-214ENST00000487670 MAP3K4Q9Y6R4 1608 aa29.31■■■□□ 2.28
TOM1-214ENST00000487670 IQGAP2Q13576 1575 aa29.25■■■□□ 2.27
TOM1-214ENST00000487670 PLB1Q6P1J6 1458 aa29.24■■■□□ 2.27
TOM1-214ENST00000487670 ZCCHC11Q5TAX3 1644 aaKnown RBP29.23■■■□□ 2.27
TOM1-214ENST00000487670 KIF27Q86VH2 1401 aa29.23■■■□□ 2.27
TOM1-214ENST00000487670 TNIKQ9UKE5 1360 aa29.23■■■□□ 2.27
TOM1-214ENST00000487670 EPRSP07814 1512 aaKnown RBP29.2■■■□□ 2.26
TOM1-214ENST00000487670 UHRF1BP1LA0JNW5 1464 aa29.19■■■□□ 2.26
TOM1-214ENST00000487670 DISP1Q96F81 1524 aa29.18■■■□□ 2.26
TOM1-214ENST00000487670 CARMIL2Q6F5E8 1435 aa29.15■■■□□ 2.26
TOM1-214ENST00000487670 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
TOM1-214ENST00000487670 UACAQ9BZF9 1416 aa29.13■■■□□ 2.25
TOM1-214ENST00000487670 KDM5BQ9UGL1 1544 aa29.12■■■□□ 2.25
TOM1-214ENST00000487670 KIAA0556O60303 1618 aa29.05■■■□□ 2.24
TOM1-214ENST00000487670 TEX14Q8IWB6 1497 aa29.04■■■□□ 2.24
TOM1-214ENST00000487670 KIF21BO75037 1637 aa29.02■■■□□ 2.24
TOM1-214ENST00000487670 UGGT2Q9NYU1 1516 aa28.99■■■□□ 2.23
TOM1-214ENST00000487670 CFAP43Q8NDM7 1665 aa28.95■■■□□ 2.22
TOM1-214ENST00000487670 WDR7Q9Y4E6 1490 aa28.94■■■□□ 2.22
TOM1-214ENST00000487670 CTTNBP2Q8WZ74 1663 aa28.89■■■□□ 2.22
TOM1-214ENST00000487670 MAGI3Q5TCQ9 1506 aa28.82■■■□□ 2.2
TOM1-214ENST00000487670 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
TOM1-214ENST00000487670 ABCA8O94911 1581 aa28.8■■■□□ 2.2
TOM1-214ENST00000487670 CD109Q6YHK3 1445 aa28.78■■■□□ 2.2
TOM1-214ENST00000487670 ADAMTSL3P82987 1691 aa28.74■■■□□ 2.19
TOM1-214ENST00000487670 KCNH8Q96L42 1107 aa28.71■■■□□ 2.19
TOM1-214ENST00000487670 FBXO41Q8TF61 875 aa28.67■■■□□ 2.18
TOM1-214ENST00000487670 PTPRMP28827 1452 aa28.63■■■□□ 2.17
TOM1-214ENST00000487670 ARAP3Q8WWN8 1544 aa28.62■■■□□ 2.17
TOM1-214ENST00000487670 BCORL1Q5H9F3 1711 aa28.61■■■□□ 2.17
TOM1-214ENST00000487670 MADDQ8WXG6 1647 aa28.61■■■□□ 2.17
TOM1-214ENST00000487670 FRMPD1Q5SYB0 1578 aa28.59■■■□□ 2.17
TOM1-214ENST00000487670 ABCA9Q8IUA7 1624 aa28.58■■■□□ 2.17
TOM1-214ENST00000487670 ARID3CA6NKF2 412 aa28.55■■■□□ 2.16
TOM1-214ENST00000487670 GOLGA3Q08378 1498 aa28.54■■■□□ 2.16
TOM1-214ENST00000487670 RIMS1Q86UR5 1692 aaKnown RBP28.52■■■□□ 2.16
TOM1-214ENST00000487670 PCF11O94913 1555 aaKnown RBP28.52■■■□□ 2.16
TOM1-214ENST00000487670 LMTK3Q96Q04 1460 aa28.49■■■□□ 2.15
TOM1-214ENST00000487670 ATP10BO94823 1461 aa28.48■■■□□ 2.15
TOM1-214ENST00000487670 SIGLEC1Q9BZZ2 1709 aa28.46■■■□□ 2.15
TOM1-214ENST00000487670 RAPGEF3O95398 923 aa28.45■■■□□ 2.14
TOM1-214ENST00000487670 RICTORQ6R327 1708 aa28.4■■■□□ 2.14
TOM1-214ENST00000487670 ARHGEF40Q8TER5 1519 aa28.38■■■□□ 2.13
TOM1-214ENST00000487670 PRXQ9BXM0 1461 aa28.38■■■□□ 2.13
TOM1-214ENST00000487670 RAPGEF6Q8TEU7 1601 aa28.37■■■□□ 2.13
TOM1-214ENST00000487670 P3H3Q8IVL6 736 aa28.37■■■□□ 2.13
TOM1-214ENST00000487670 SAMD9Q5K651 1589 aa28.34■■■□□ 2.13
TOM1-214ENST00000487670 NEO1Q92859 1461 aa28.34■■■□□ 2.13
TOM1-214ENST00000487670 HSPA2P54652 639 aa28.28■■■□□ 2.12
TOM1-214ENST00000487670 PHLDB1Q86UU1 1377 aa28.27■■■□□ 2.12
TOM1-214ENST00000487670 ARID4BQ4LE39 1312 aaPredicted RBP28.27■■■□□ 2.12
TOM1-214ENST00000487670 FER1L4A9Z1Z3 1794 aa28.24■■■□□ 2.11
TOM1-214ENST00000487670 PLPPR3Q6T4P5 718 aa28.22■■■□□ 2.11
TOM1-214ENST00000487670 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
TOM1-214ENST00000487670 TTC37Q6PGP7 1564 aa28.19■■■□□ 2.1
TOM1-214ENST00000487670 DENND4BO75064 1496 aaPredicted RBP28.15■■■□□ 2.1
TOM1-214ENST00000487670 ZMYM4Q5VZL5 1548 aa28.14■■■□□ 2.1
TOM1-214ENST00000487670 YEATS2Q9ULM3 1422 aa28.14■■■□□ 2.1
TOM1-214ENST00000487670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.13■■■□□ 2.09
TOM1-214ENST00000487670 CFAP74Q9C0B2 1584 aa28.13■■■□□ 2.09
TOM1-214ENST00000487670 ZFYVE16Q7Z3T8 1539 aa28.11■■■□□ 2.09
TOM1-214ENST00000487670 AKNAQ7Z591 1439 aa28.1■■■□□ 2.09
TOM1-214ENST00000487670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.1■■■□□ 2.09
TOM1-214ENST00000487670 HNRNPUL2Q1KMD3 747 aaKnown RBP28.1■■■□□ 2.09
TOM1-214ENST00000487670 FHOD3Q2V2M9 1422 aa28.09■■■□□ 2.09
TOM1-214ENST00000487670 HECW1Q76N89 1606 aa28.09■■■□□ 2.09
TOM1-214ENST00000487670 FANCAO15360 1455 aa28.08■■■□□ 2.09
TOM1-214ENST00000487670 STRCQ7RTU9 1775 aa28.08■■■□□ 2.09
TOM1-214ENST00000487670 CERKQ8TCT0 537 aa28.07■■■□□ 2.08
TOM1-214ENST00000487670 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
TOM1-214ENST00000487670 EFCAB5A4FU69 1503 aa28.05■■■□□ 2.08
TOM1-214ENST00000487670 ILDR2Q71H61 639 aa28.05■■■□□ 2.08
TOM1-214ENST00000487670 MLECQ14165 292 aa28.01■■■□□ 2.07
TOM1-214ENST00000487670 RANGAP1P46060 587 aaPredicted RBP27.99■■■□□ 2.07
TOM1-214ENST00000487670 POGZQ7Z3K3 1410 aa27.97■■■□□ 2.07
TOM1-214ENST00000487670 ARHGEF12Q9NZN5 1544 aa27.97■■■□□ 2.07
TOM1-214ENST00000487670 CDK13Q14004 1512 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms