RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.63
CLDN11-207ENST00000486975 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.62
CLDN11-207ENST00000486975 NUP160Q12769 1436 aa25.16■■□□□ 1.62
CLDN11-207ENST00000486975 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
CLDN11-207ENST00000486975 KIF27Q86VH2 1401 aa25.03■■□□□ 1.6
CLDN11-207ENST00000486975 MAPK8IP2Q13387 824 aaPredicted RBP25.02■■□□□ 1.6
CLDN11-207ENST00000486975 SHROOM2Q13796 1616 aa25■■□□□ 1.59
CLDN11-207ENST00000486975 IGF1RP08069 1367 aa24.97■■□□□ 1.59
CLDN11-207ENST00000486975 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
CLDN11-207ENST00000486975 CUL7Q14999 1698 aa24.93■■□□□ 1.58
CLDN11-207ENST00000486975 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
CLDN11-207ENST00000486975 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.57
CLDN11-207ENST00000486975 JPH4Q96JJ6 628 aa24.83■■□□□ 1.57
CLDN11-207ENST00000486975 DMRT2Q9Y5R5 561 aa24.83■■□□□ 1.57
CLDN11-207ENST00000486975 PRG4Q92954 1404 aaPredicted RBP24.83■■□□□ 1.57
CLDN11-207ENST00000486975 KIAA0586Q9BVV6 1533 aa24.81■■□□□ 1.56
CLDN11-207ENST00000486975 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
CLDN11-207ENST00000486975 TRHP20396 242 aaPredicted RBP24.79■■□□□ 1.56
CLDN11-207ENST00000486975 RAPGEF2Q9Y4G8 1499 aa24.62■■□□□ 1.53
CLDN11-207ENST00000486975 IQGAP2Q13576 1575 aa24.59■■□□□ 1.53
CLDN11-207ENST00000486975 PPP4R3CPQ6ZMV5 832 aa24.56■■□□□ 1.52
CLDN11-207ENST00000486975 CARMIL2Q6F5E8 1435 aa24.54■■□□□ 1.52
CLDN11-207ENST00000486975 ADCY10Q96PN6 1610 aa24.5■■□□□ 1.51
CLDN11-207ENST00000486975 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
CLDN11-207ENST00000486975 PTPRGP23470 1445 aa24.49■■□□□ 1.51
CLDN11-207ENST00000486975 MAPKBP1O60336 1514 aa24.48■■□□□ 1.51
CLDN11-207ENST00000486975 UGGT2Q9NYU1 1516 aa24.48■■□□□ 1.51
CLDN11-207ENST00000486975 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
CLDN11-207ENST00000486975 DISP1Q96F81 1524 aa24.46■■□□□ 1.51
CLDN11-207ENST00000486975 NPM1P06748 294 aaKnown RBP eCLIP24.46■■□□□ 1.51
CLDN11-207ENST00000486975 ABCC10Q5T3U5 1492 aa24.39■■□□□ 1.5
CLDN11-207ENST00000486975 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.49
CLDN11-207ENST00000486975 CTTNBP2Q8WZ74 1663 aa24.37■■□□□ 1.49
CLDN11-207ENST00000486975 UHRF1BP1LA0JNW5 1464 aa24.37■■□□□ 1.49
CLDN11-207ENST00000486975 KIAA0556O60303 1618 aa24.36■■□□□ 1.49
CLDN11-207ENST00000486975 ABCC2Q92887 1545 aa24.35■■□□□ 1.49
CLDN11-207ENST00000486975 EEA1Q15075 1411 aa24.34■■□□□ 1.49
CLDN11-207ENST00000486975 DIP2BQ9P265 1576 aa24.33■■□□□ 1.49
CLDN11-207ENST00000486975 UACAQ9BZF9 1416 aa24.33■■□□□ 1.49
CLDN11-207ENST00000486975 CSRNP3Q8WYN3 585 aa24.3■■□□□ 1.48
CLDN11-207ENST00000486975 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
CLDN11-207ENST00000486975 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
CLDN11-207ENST00000486975 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
CLDN11-207ENST00000486975 KDM5BQ9UGL1 1544 aa24.25■■□□□ 1.47
CLDN11-207ENST00000486975 PLB1Q6P1J6 1458 aa24.23■■□□□ 1.47
CLDN11-207ENST00000486975 ASXL2Q76L83 1435 aa24.21■■□□□ 1.47
CLDN11-207ENST00000486975 GLI2P10070 1586 aa24.16■■□□□ 1.46
CLDN11-207ENST00000486975 ABCA8O94911 1581 aa24.14■■□□□ 1.45
CLDN11-207ENST00000486975 ZCCHC11Q5TAX3 1644 aaKnown RBP24.13■■□□□ 1.45
CLDN11-207ENST00000486975 SAMD9Q5K651 1589 aa24.09■■□□□ 1.45
CLDN11-207ENST00000486975 KIF21BO75037 1637 aa24.08■■□□□ 1.45
CLDN11-207ENST00000486975 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.45
CLDN11-207ENST00000486975 CNKSR2Q8WXI2 1034 aa24.06■■□□□ 1.44
CLDN11-207ENST00000486975 WDR7Q9Y4E6 1490 aa24.05■■□□□ 1.44
CLDN11-207ENST00000486975 FAM9AQ8IZU1 332 aaPredicted RBP24.03■■□□□ 1.44
CLDN11-207ENST00000486975 KDM6BO15054 1643 aa24.02■■□□□ 1.44
CLDN11-207ENST00000486975 TSPOAP1O95153 1857 aa24.01■■□□□ 1.43
CLDN11-207ENST00000486975 MAP3K4Q9Y6R4 1608 aa23.99■■□□□ 1.43
CLDN11-207ENST00000486975 PPRC1Q5VV67 1664 aaKnown RBP23.99■■□□□ 1.43
CLDN11-207ENST00000486975 P3H3Q8IVL6 736 aa23.97■■□□□ 1.43
CLDN11-207ENST00000486975 HOXD11P31277 338 aaPredicted RBP23.96■■□□□ 1.43
CLDN11-207ENST00000486975 TEX14Q8IWB6 1497 aa23.94■■□□□ 1.42
CLDN11-207ENST00000486975 EFCAB5A4FU69 1503 aa23.93■■□□□ 1.42
CLDN11-207ENST00000486975 ATP10BO94823 1461 aa23.92■■□□□ 1.42
CLDN11-207ENST00000486975 RAPGEF6Q8TEU7 1601 aa23.91■■□□□ 1.42
CLDN11-207ENST00000486975 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
CLDN11-207ENST00000486975 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
CLDN11-207ENST00000486975 MAGI3Q5TCQ9 1506 aa23.86■■□□□ 1.41
CLDN11-207ENST00000486975 NUP153P49790 1475 aaKnown RBP23.84■■□□□ 1.41
CLDN11-207ENST00000486975 CD109Q6YHK3 1445 aa23.84■■□□□ 1.41
CLDN11-207ENST00000486975 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
CLDN11-207ENST00000486975 KCNH8Q96L42 1107 aa23.82■■□□□ 1.4
CLDN11-207ENST00000486975 RNF216Q9NWF9 866 aaPredicted RBP23.82■■□□□ 1.4
CLDN11-207ENST00000486975 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
CLDN11-207ENST00000486975 DCAF8L1A6NGE4 600 aa23.8■■□□□ 1.4
CLDN11-207ENST00000486975 ARID3CA6NKF2 412 aa23.79■■□□□ 1.4
CLDN11-207ENST00000486975 UBTFP17480 764 aaKnown RBP23.79■■□□□ 1.4
CLDN11-207ENST00000486975 ABCA9Q8IUA7 1624 aa23.75■■□□□ 1.39
CLDN11-207ENST00000486975 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
CLDN11-207ENST00000486975 FMN1Q68DA7 1419 aa23.7■■□□□ 1.38
CLDN11-207ENST00000486975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.7■■□□□ 1.38
CLDN11-207ENST00000486975 HNRNPUL2Q1KMD3 747 aaKnown RBP23.7■■□□□ 1.38
CLDN11-207ENST00000486975 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
CLDN11-207ENST00000486975 PHLDB1Q86UU1 1377 aa23.67■■□□□ 1.38
CLDN11-207ENST00000486975 ARAP3Q8WWN8 1544 aa23.66■■□□□ 1.38
CLDN11-207ENST00000486975 PLEKHD1A6NEE1 506 aa23.65■■□□□ 1.38
CLDN11-207ENST00000486975 NCBP3Q53F19 620 aaKnown RBP23.64■■□□□ 1.37
CLDN11-207ENST00000486975 NEO1Q92859 1461 aa23.62■■□□□ 1.37
CLDN11-207ENST00000486975 KDM4FA0A1W2PPD8 638 aa23.62■■□□□ 1.37
CLDN11-207ENST00000486975 HECW1Q76N89 1606 aa23.62■■□□□ 1.37
CLDN11-207ENST00000486975 CDK13Q14004 1512 aaKnown RBP23.59■■□□□ 1.37
CLDN11-207ENST00000486975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.55■■□□□ 1.36
CLDN11-207ENST00000486975 ADGRL1O94910 1474 aa23.54■■□□□ 1.36
CLDN11-207ENST00000486975 TTC37Q6PGP7 1564 aa23.51■■□□□ 1.35
CLDN11-207ENST00000486975 CDK11AQ9UQ88 783 aaPredicted RBP23.5■■□□□ 1.35
CLDN11-207ENST00000486975 CFAP74Q9C0B2 1584 aa23.48■■□□□ 1.35
CLDN11-207ENST00000486975 FANCAO15360 1455 aa23.48■■□□□ 1.35
CLDN11-207ENST00000486975 ATP1B4Q9UN42 357 aaPredicted RBP23.47■■□□□ 1.35
CLDN11-207ENST00000486975 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
CLDN11-207ENST00000486975 FRMPD1Q5SYB0 1578 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms