RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 AEBP2Q6ZN18 517 aaPredicted RBP36.73■■■■□ 3.47
CLDN11-207ENST00000486975 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
CLDN11-207ENST00000486975 CHIC1Q5VXU3 224 aa34.98■■■■□ 3.19
CLDN11-207ENST00000486975 CCDC180Q9P1Z9 1646 aa31.94■■■□□ 2.7
CLDN11-207ENST00000486975 ABCC9O60706 1549 aa31.52■■■□□ 2.64
CLDN11-207ENST00000486975 SENP3Q9H4L4 574 aaPredicted RBP31.28■■■□□ 2.6
CLDN11-207ENST00000486975 PHF23Q9BUL5 403 aaPredicted RBP30.9■■■□□ 2.54
CLDN11-207ENST00000486975 RB1CC1Q8TDY2 1594 aa30.22■■■□□ 2.43
CLDN11-207ENST00000486975 NACADO15069 1562 aa30.13■■■□□ 2.41
CLDN11-207ENST00000486975 MYO15BQ96JP2 1530 aa29.9■■■□□ 2.38
CLDN11-207ENST00000486975 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
CLDN11-207ENST00000486975 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.35
CLDN11-207ENST00000486975 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
CLDN11-207ENST00000486975 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.31
CLDN11-207ENST00000486975 PABPN1Q86U42 306 aaKnown RBP eCLIP29.36■■■□□ 2.29
CLDN11-207ENST00000486975 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
CLDN11-207ENST00000486975 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
CLDN11-207ENST00000486975 FOXD1Q16676 465 aa29.15■■■□□ 2.26
CLDN11-207ENST00000486975 SHROOM4Q9ULL8 1493 aa29.09■■■□□ 2.25
CLDN11-207ENST00000486975 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
CLDN11-207ENST00000486975 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
CLDN11-207ENST00000486975 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
CLDN11-207ENST00000486975 CECR2Q9BXF3 1484 aa28.4■■■□□ 2.14
CLDN11-207ENST00000486975 PLPPR3Q6T4P5 718 aa28■■■□□ 2.07
CLDN11-207ENST00000486975 NCAPD3P42695 1498 aa27.82■■■□□ 2.04
CLDN11-207ENST00000486975 SMARCA4P51532 1647 aa27.78■■■□□ 2.04
CLDN11-207ENST00000486975 ATAD2BQ9ULI0 1458 aa27.74■■■□□ 2.03
CLDN11-207ENST00000486975 BAZ1AQ9NRL2 1556 aaPredicted RBP27.72■■■□□ 2.03
CLDN11-207ENST00000486975 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
CLDN11-207ENST00000486975 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
CLDN11-207ENST00000486975 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
CLDN11-207ENST00000486975 MROH2BQ7Z745 1585 aa27.49■■□□□ 1.99
CLDN11-207ENST00000486975 BAZ1BQ9UIG0 1483 aaKnown RBP27.47■■□□□ 1.99
CLDN11-207ENST00000486975 PPP6R1Q9UPN7 881 aa27.37■■□□□ 1.97
CLDN11-207ENST00000486975 ADRA2BP18089 450 aa27.28■■□□□ 1.96
CLDN11-207ENST00000486975 PIAS4Q8N2W9 510 aaPredicted RBP27.27■■□□□ 1.96
CLDN11-207ENST00000486975 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
CLDN11-207ENST00000486975 MSH5O43196 834 aa27.21■■□□□ 1.95
CLDN11-207ENST00000486975 NESP48681 1621 aa27.17■■□□□ 1.94
CLDN11-207ENST00000486975 WIZO95785 1651 aa27.14■■□□□ 1.94
CLDN11-207ENST00000486975 CUX2O14529 1486 aa27.13■■□□□ 1.93
CLDN11-207ENST00000486975 LAMC3Q9Y6N6 1575 aa27.11■■□□□ 1.93
CLDN11-207ENST00000486975 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
CLDN11-207ENST00000486975 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
CLDN11-207ENST00000486975 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
CLDN11-207ENST00000486975 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
CLDN11-207ENST00000486975 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
CLDN11-207ENST00000486975 KIF21AQ7Z4S6 1674 aa26.83■■□□□ 1.89
CLDN11-207ENST00000486975 CFTRP13569 1480 aa26.74■■□□□ 1.87
CLDN11-207ENST00000486975 DNAJC5Q9H3Z4 198 aa26.69■■□□□ 1.86
CLDN11-207ENST00000486975 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
CLDN11-207ENST00000486975 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
CLDN11-207ENST00000486975 FANCD2Q9BXW9 1451 aa26.62■■□□□ 1.85
CLDN11-207ENST00000486975 WDR62O43379 1518 aa26.62■■□□□ 1.85
CLDN11-207ENST00000486975 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
CLDN11-207ENST00000486975 PRDM2Q13029 1718 aa26.44■■□□□ 1.82
CLDN11-207ENST00000486975 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
CLDN11-207ENST00000486975 POTEDQ86YR6 584 aa26.37■■□□□ 1.81
CLDN11-207ENST00000486975 ABCC8Q09428 1581 aa26.18■■□□□ 1.78
CLDN11-207ENST00000486975 TOPBP1Q92547 1522 aa26.16■■□□□ 1.78
CLDN11-207ENST00000486975 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
CLDN11-207ENST00000486975 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
CLDN11-207ENST00000486975 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
CLDN11-207ENST00000486975 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
CLDN11-207ENST00000486975 POLA1P09884 1462 aaPredicted RBP25.92■■□□□ 1.74
CLDN11-207ENST00000486975 TARBP1Q13395 1621 aaKnown RBP25.91■■□□□ 1.74
CLDN11-207ENST00000486975 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
CLDN11-207ENST00000486975 EIF4G3O43432 1585 aaKnown RBP25.87■■□□□ 1.73
CLDN11-207ENST00000486975 CUX1P39880 1505 aa25.82■■□□□ 1.72
CLDN11-207ENST00000486975 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
CLDN11-207ENST00000486975 SOGA1O94964 1423 aa25.79■■□□□ 1.72
CLDN11-207ENST00000486975 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.72
CLDN11-207ENST00000486975 RAD54L2Q9Y4B4 1467 aa25.77■■□□□ 1.72
CLDN11-207ENST00000486975 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
CLDN11-207ENST00000486975 TDRD9Q8NDG6 1382 aaKnown RBP25.67■■□□□ 1.7
CLDN11-207ENST00000486975 CHD1O14646 1710 aa25.57■■□□□ 1.68
CLDN11-207ENST00000486975 GRIN2BQ13224 1484 aa25.56■■□□□ 1.68
CLDN11-207ENST00000486975 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
CLDN11-207ENST00000486975 SNAPC4Q5SXM2 1469 aa25.54■■□□□ 1.68
CLDN11-207ENST00000486975 MAGI1Q96QZ7 1491 aaPredicted RBP25.54■■□□□ 1.68
CLDN11-207ENST00000486975 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
CLDN11-207ENST00000486975 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
CLDN11-207ENST00000486975 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
CLDN11-207ENST00000486975 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
CLDN11-207ENST00000486975 RIMBP3CA6NJZ7 1639 aa25.49■■□□□ 1.67
CLDN11-207ENST00000486975 RIMBP3BA6NNM3 1639 aa25.49■■□□□ 1.67
CLDN11-207ENST00000486975 RIMBP3Q9UFD9 1639 aa25.49■■□□□ 1.67
CLDN11-207ENST00000486975 GAPVD1Q14C86 1478 aa25.49■■□□□ 1.67
CLDN11-207ENST00000486975 ARHGEF11O15085 1522 aa25.48■■□□□ 1.67
CLDN11-207ENST00000486975 FBLN2P98095 1184 aa25.48■■□□□ 1.67
CLDN11-207ENST00000486975 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
CLDN11-207ENST00000486975 SYNJ1O43426 1573 aa25.46■■□□□ 1.67
CLDN11-207ENST00000486975 SYNJ2O15056 1496 aa25.45■■□□□ 1.66
CLDN11-207ENST00000486975 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
CLDN11-207ENST00000486975 CHMP7Q8WUX9 453 aaPredicted RBP25.4■■□□□ 1.66
CLDN11-207ENST00000486975 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
CLDN11-207ENST00000486975 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
CLDN11-207ENST00000486975 ERICH3Q5RHP9 1530 aa25.25■■□□□ 1.63
CLDN11-207ENST00000486975 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
CLDN11-207ENST00000486975 GRIN2AQ12879 1464 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms