RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
POLR1A-208ENST00000486964 PBRM1Q86U86 1689 aa14.96□□□□□ -0.01
POLR1A-208ENST00000486964 ZEB1P37275 1124 aaPredicted RBP14.96□□□□□ -0.01
POLR1A-208ENST00000486964 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
POLR1A-208ENST00000486964 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
POLR1A-208ENST00000486964 MAGI1Q96QZ7 1491 aaPredicted RBP14.94□□□□□ -0.02
POLR1A-208ENST00000486964 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
POLR1A-208ENST00000486964 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
POLR1A-208ENST00000486964 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
POLR1A-208ENST00000486964 RIMBP3CA6NJZ7 1639 aa14.9□□□□□ -0.02
POLR1A-208ENST00000486964 RIMBP3BA6NNM3 1639 aa14.9□□□□□ -0.02
POLR1A-208ENST00000486964 RIMBP3Q9UFD9 1639 aa14.9□□□□□ -0.02
POLR1A-208ENST00000486964 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
POLR1A-208ENST00000486964 SYNJ2O15056 1496 aa14.89□□□□□ -0.03
POLR1A-208ENST00000486964 GRIN2AQ12879 1464 aa14.87□□□□□ -0.03
POLR1A-208ENST00000486964 KIAA0586Q9BVV6 1533 aa14.85□□□□□ -0.03
POLR1A-208ENST00000486964 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
POLR1A-208ENST00000486964 EFCAB5A4FU69 1503 aa14.84□□□□□ -0.03
POLR1A-208ENST00000486964 CTTNBP2Q8WZ74 1663 aa14.83□□□□□ -0.04
POLR1A-208ENST00000486964 NUP160Q12769 1436 aa14.83□□□□□ -0.04
POLR1A-208ENST00000486964 SAMD9Q5K651 1589 aa14.8□□□□□ -0.04
POLR1A-208ENST00000486964 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
POLR1A-208ENST00000486964 UGGT2Q9NYU1 1516 aa14.79□□□□□ -0.04
POLR1A-208ENST00000486964 IQGAP2Q13576 1575 aa14.78□□□□□ -0.04
POLR1A-208ENST00000486964 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
POLR1A-208ENST00000486964 P3H3Q8IVL6 736 aa14.76□□□□□ -0.05
POLR1A-208ENST00000486964 FHOD3Q2V2M9 1422 aa14.76□□□□□ -0.05
POLR1A-208ENST00000486964 CEP170Q5SW79 1584 aa14.76□□□□□ -0.05
POLR1A-208ENST00000486964 FOXD1Q16676 465 aa14.75□□□□□ -0.05
POLR1A-208ENST00000486964 FBLN2P98095 1184 aa14.75□□□□□ -0.05
POLR1A-208ENST00000486964 MAP3K1Q13233 1512 aa14.74□□□□□ -0.05
POLR1A-208ENST00000486964 FMN1Q68DA7 1419 aa14.72□□□□□ -0.05
POLR1A-208ENST00000486964 CASKIN1Q8WXD9 1431 aa14.72□□□□□ -0.05
POLR1A-208ENST00000486964 DISP1Q96F81 1524 aa14.72□□□□□ -0.05
POLR1A-208ENST00000486964 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
POLR1A-208ENST00000486964 APLP2Q06481 763 aa14.71□□□□□ -0.05
POLR1A-208ENST00000486964 CHD1O14646 1710 aa14.71□□□□□ -0.05
POLR1A-208ENST00000486964 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
POLR1A-208ENST00000486964 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
POLR1A-208ENST00000486964 FYCO1Q9BQS8 1478 aa14.67□□□□□ -0.06
POLR1A-208ENST00000486964 KIAA0556O60303 1618 aa14.64□□□□□ -0.07
POLR1A-208ENST00000486964 PCF11O94913 1555 aaKnown RBP14.63□□□□□ -0.07
POLR1A-208ENST00000486964 TIAM1Q13009 1591 aa14.62□□□□□ -0.07
POLR1A-208ENST00000486964 CYB5RLQ6IPT4 315 aa14.61□□□□□ -0.07
POLR1A-208ENST00000486964 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
POLR1A-208ENST00000486964 LRRC9Q6ZRR7 1453 aa14.59□□□□□ -0.07
POLR1A-208ENST00000486964 PRG4Q92954 1404 aaPredicted RBP14.58□□□□□ -0.08
POLR1A-208ENST00000486964 SHROOM2Q13796 1616 aa14.57□□□□□ -0.08
POLR1A-208ENST00000486964 CLASP1Q7Z460 1538 aa14.57□□□□□ -0.08
POLR1A-208ENST00000486964 TTBK1Q5TCY1 1321 aaPredicted RBP14.57□□□□□ -0.08
POLR1A-208ENST00000486964 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
POLR1A-208ENST00000486964 ATP1B4Q9UN42 357 aaPredicted RBP14.54□□□□□ -0.08
POLR1A-208ENST00000486964 CFAP43Q8NDM7 1665 aa14.53□□□□□ -0.08
POLR1A-208ENST00000486964 RRBP1Q9P2E9 1410 aaKnown RBP14.52□□□□□ -0.08
POLR1A-208ENST00000486964 EPRSP07814 1512 aaKnown RBP14.52□□□□□ -0.09
POLR1A-208ENST00000486964 CCDC18Q5T9S5 1454 aa14.52□□□□□ -0.09
POLR1A-208ENST00000486964 NUP153P49790 1475 aaKnown RBP14.51□□□□□ -0.09
POLR1A-208ENST00000486964 PTPRGP23470 1445 aa14.5□□□□□ -0.09
POLR1A-208ENST00000486964 HECW1Q76N89 1606 aa14.5□□□□□ -0.09
POLR1A-208ENST00000486964 ABCA8O94911 1581 aa14.49□□□□□ -0.09
POLR1A-208ENST00000486964 PLB1Q6P1J6 1458 aa14.49□□□□□ -0.09
POLR1A-208ENST00000486964 LRRIQ1Q96JM4 1722 aa14.48□□□□□ -0.09
POLR1A-208ENST00000486964 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
POLR1A-208ENST00000486964 RAPGEF6Q8TEU7 1601 aa14.48□□□□□ -0.09
POLR1A-208ENST00000486964 MSH5O43196 834 aa14.47□□□□□ -0.09
POLR1A-208ENST00000486964 MAGI3Q5TCQ9 1506 aa14.46□□□□□ -0.09
POLR1A-208ENST00000486964 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
POLR1A-208ENST00000486964 ERCC6L2Q5T890 1561 aa14.45□□□□□ -0.1
POLR1A-208ENST00000486964 CDK13Q14004 1512 aaKnown RBP14.44□□□□□ -0.1
POLR1A-208ENST00000486964 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
POLR1A-208ENST00000486964 ATP10BO94823 1461 aa14.42□□□□□ -0.1
POLR1A-208ENST00000486964 EHBP1L1Q8N3D4 1523 aa14.42□□□□□ -0.1
POLR1A-208ENST00000486964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.42□□□□□ -0.1
POLR1A-208ENST00000486964 UACAQ9BZF9 1416 aa14.42□□□□□ -0.1
POLR1A-208ENST00000486964 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
POLR1A-208ENST00000486964 NCOA2Q15596 1464 aa14.4□□□□□ -0.1
POLR1A-208ENST00000486964 UHRF1BP1LA0JNW5 1464 aa14.38□□□□□ -0.11
POLR1A-208ENST00000486964 TROQ12816 1431 aaPredicted RBP14.37□□□□□ -0.11
POLR1A-208ENST00000486964 ARID3CA6NKF2 412 aa14.37□□□□□ -0.11
POLR1A-208ENST00000486964 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
POLR1A-208ENST00000486964 MYOM3Q5VTT5 1437 aa14.35□□□□□ -0.11
POLR1A-208ENST00000486964 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
POLR1A-208ENST00000486964 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
POLR1A-208ENST00000486964 PLEKHD1A6NEE1 506 aa14.34□□□□□ -0.11
POLR1A-208ENST00000486964 ABCC2Q92887 1545 aa14.34□□□□□ -0.11
POLR1A-208ENST00000486964 SUPT6HQ7KZ85 1726 aaKnown RBP14.33□□□□□ -0.12
POLR1A-208ENST00000486964 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
POLR1A-208ENST00000486964 MIA2Q96PC5 1412 aa14.32□□□□□ -0.12
POLR1A-208ENST00000486964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
POLR1A-208ENST00000486964 KDM5BQ9UGL1 1544 aa14.3□□□□□ -0.12
POLR1A-208ENST00000486964 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
POLR1A-208ENST00000486964 ABCC10Q5T3U5 1492 aa14.28□□□□□ -0.12
POLR1A-208ENST00000486964 ADCY10Q96PN6 1610 aa14.27□□□□□ -0.12
POLR1A-208ENST00000486964 FAM50AQ14320 339 aaKnown RBP14.27□□□□□ -0.12
POLR1A-208ENST00000486964 GPATCH8Q9UKJ3 1502 aaKnown RBP14.26□□□□□ -0.13
POLR1A-208ENST00000486964 PTPRKQ15262 1439 aa14.24□□□□□ -0.13
POLR1A-208ENST00000486964 KIF14Q15058 1648 aa14.22□□□□□ -0.13
POLR1A-208ENST00000486964 PTPN23Q9H3S7 1636 aa14.22□□□□□ -0.13
POLR1A-208ENST00000486964 KIF13AQ9H1H9 1805 aa14.21□□□□□ -0.13
POLR1A-208ENST00000486964 ITGAEP38570 1179 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 745.4 ms