RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
POLR1A-208ENST00000486964 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
POLR1A-208ENST00000486964 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
POLR1A-208ENST00000486964 ABCC9O60706 1549 aa18.15■□□□□ 0.5
POLR1A-208ENST00000486964 AEBP2Q6ZN18 517 aaPredicted RBP18.06■□□□□ 0.48
POLR1A-208ENST00000486964 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
POLR1A-208ENST00000486964 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
POLR1A-208ENST00000486964 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
POLR1A-208ENST00000486964 CHIC1Q5VXU3 224 aa17.72■□□□□ 0.43
POLR1A-208ENST00000486964 NACADO15069 1562 aa17.62■□□□□ 0.41
POLR1A-208ENST00000486964 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.39
POLR1A-208ENST00000486964 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
POLR1A-208ENST00000486964 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
POLR1A-208ENST00000486964 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
POLR1A-208ENST00000486964 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
POLR1A-208ENST00000486964 BICRAQ9NZM4 1560 aa16.96■□□□□ 0.31
POLR1A-208ENST00000486964 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
POLR1A-208ENST00000486964 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
POLR1A-208ENST00000486964 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
POLR1A-208ENST00000486964 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
POLR1A-208ENST00000486964 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
POLR1A-208ENST00000486964 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
POLR1A-208ENST00000486964 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
POLR1A-208ENST00000486964 WIZO95785 1651 aa16.52■□□□□ 0.23
POLR1A-208ENST00000486964 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
POLR1A-208ENST00000486964 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
POLR1A-208ENST00000486964 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
POLR1A-208ENST00000486964 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
POLR1A-208ENST00000486964 EIF4G1Q04637 1599 aaKnown RBP16.41■□□□□ 0.22
POLR1A-208ENST00000486964 TOP2AP11388 1531 aaKnown RBP16.39■□□□□ 0.21
POLR1A-208ENST00000486964 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
POLR1A-208ENST00000486964 NCAPD3P42695 1498 aa16.33■□□□□ 0.21
POLR1A-208ENST00000486964 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
POLR1A-208ENST00000486964 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
POLR1A-208ENST00000486964 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
POLR1A-208ENST00000486964 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
POLR1A-208ENST00000486964 CFTRP13569 1480 aa15.93■□□□□ 0.14
POLR1A-208ENST00000486964 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
POLR1A-208ENST00000486964 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
POLR1A-208ENST00000486964 CUX2O14529 1486 aa15.82■□□□□ 0.12
POLR1A-208ENST00000486964 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
POLR1A-208ENST00000486964 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
POLR1A-208ENST00000486964 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
POLR1A-208ENST00000486964 PHF23Q9BUL5 403 aaPredicted RBP15.71■□□□□ 0.11
POLR1A-208ENST00000486964 NESP48681 1621 aa15.68■□□□□ 0.1
POLR1A-208ENST00000486964 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
POLR1A-208ENST00000486964 LAMC3Q9Y6N6 1575 aa15.68■□□□□ 0.1
POLR1A-208ENST00000486964 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
POLR1A-208ENST00000486964 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
POLR1A-208ENST00000486964 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
POLR1A-208ENST00000486964 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
POLR1A-208ENST00000486964 CUX1P39880 1505 aa15.63■□□□□ 0.09
POLR1A-208ENST00000486964 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
POLR1A-208ENST00000486964 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
POLR1A-208ENST00000486964 SOGA1O94964 1423 aa15.59■□□□□ 0.09
POLR1A-208ENST00000486964 LOC105371045A0A1W2PR82 267 aa15.59■□□□□ 0.09
POLR1A-208ENST00000486964 EEA1Q15075 1411 aa15.57■□□□□ 0.08
POLR1A-208ENST00000486964 FAM9AQ8IZU1 332 aaPredicted RBP15.55■□□□□ 0.08
POLR1A-208ENST00000486964 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
POLR1A-208ENST00000486964 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
POLR1A-208ENST00000486964 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
POLR1A-208ENST00000486964 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
POLR1A-208ENST00000486964 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
POLR1A-208ENST00000486964 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
POLR1A-208ENST00000486964 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
POLR1A-208ENST00000486964 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
POLR1A-208ENST00000486964 HRCP23327 699 aa15.41■□□□□ 0.06
POLR1A-208ENST00000486964 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
POLR1A-208ENST00000486964 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
POLR1A-208ENST00000486964 KIF27Q86VH2 1401 aa15.39■□□□□ 0.05
POLR1A-208ENST00000486964 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
POLR1A-208ENST00000486964 ABCA10Q8WWZ4 1543 aa15.36■□□□□ 0.05
POLR1A-208ENST00000486964 IGF1RP08069 1367 aa15.35■□□□□ 0.05
POLR1A-208ENST00000486964 RAD54L2Q9Y4B4 1467 aa15.34■□□□□ 0.05
POLR1A-208ENST00000486964 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
POLR1A-208ENST00000486964 TNIKQ9UKE5 1360 aa15.32■□□□□ 0.04
POLR1A-208ENST00000486964 KIF21BO75037 1637 aa15.3■□□□□ 0.04
POLR1A-208ENST00000486964 WDR62O43379 1518 aa15.3■□□□□ 0.04
POLR1A-208ENST00000486964 GOLGA3Q08378 1498 aa15.29■□□□□ 0.04
POLR1A-208ENST00000486964 RAPGEF2Q9Y4G8 1499 aa15.25■□□□□ 0.03
POLR1A-208ENST00000486964 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
POLR1A-208ENST00000486964 TARBP1Q13395 1621 aaKnown RBP15.24■□□□□ 0.03
POLR1A-208ENST00000486964 ERICH3Q5RHP9 1530 aa15.24■□□□□ 0.03
POLR1A-208ENST00000486964 WDR97A6NE52 1622 aa15.22■□□□□ 0.03
POLR1A-208ENST00000486964 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
POLR1A-208ENST00000486964 UBTFP17480 764 aaKnown RBP15.21■□□□□ 0.03
POLR1A-208ENST00000486964 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
POLR1A-208ENST00000486964 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
POLR1A-208ENST00000486964 ABCA5Q8WWZ7 1642 aa15.18■□□□□ 0.02
POLR1A-208ENST00000486964 PCGF6Q9BYE7 350 aa15.17■□□□□ 0.02
POLR1A-208ENST00000486964 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
POLR1A-208ENST00000486964 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
POLR1A-208ENST00000486964 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.016e-12■■■■■ 50.2
POLR1A-208ENST00000486964 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
POLR1A-208ENST00000486964 CUL7Q14999 1698 aa15.08■□□□□ 0
POLR1A-208ENST00000486964 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
POLR1A-208ENST00000486964 GRIN2BQ13224 1484 aa15.07■□□□□ 0
POLR1A-208ENST00000486964 CLIP1P30622 1438 aa15.05■□□□□ -0
POLR1A-208ENST00000486964 FHAD1B1AJZ9 1412 aa15.04■□□□□ -0
POLR1A-208ENST00000486964 EIF4G3O43432 1585 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms