RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 KIAA0586Q9BVV6 1533 aa22.26■■□□□ 1.15
SF1-216ENST00000486867 EEA1Q15075 1411 aa22.25■■□□□ 1.15
SF1-216ENST00000486867 PRXQ9BXM0 1461 aa22.25■■□□□ 1.15
SF1-216ENST00000486867 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
SF1-216ENST00000486867 CTTNBP2Q8WZ74 1663 aa22.18■■□□□ 1.14
SF1-216ENST00000486867 IQGAP2Q13576 1575 aa22.16■■□□□ 1.14
SF1-216ENST00000486867 JPH4Q96JJ6 628 aa22.14■■□□□ 1.13
SF1-216ENST00000486867 PRG4Q92954 1404 aaPredicted RBP22.12■■□□□ 1.13
SF1-216ENST00000486867 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
SF1-216ENST00000486867 KIF21BO75037 1637 aa22.08■■□□□ 1.13
SF1-216ENST00000486867 UGGT2Q9NYU1 1516 aa22.07■■□□□ 1.12
SF1-216ENST00000486867 CYB5RLQ6IPT4 315 aa22.07■■□□□ 1.12
SF1-216ENST00000486867 DISP1Q96F81 1524 aa22■■□□□ 1.11
SF1-216ENST00000486867 CARMIL2Q6F5E8 1435 aa21.96■■□□□ 1.11
SF1-216ENST00000486867 KIAA0556O60303 1618 aa21.95■■□□□ 1.1
SF1-216ENST00000486867 TNIKQ9UKE5 1360 aa21.89■■□□□ 1.1
SF1-216ENST00000486867 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.09
SF1-216ENST00000486867 GOLGA3Q08378 1498 aa21.89■■□□□ 1.09
SF1-216ENST00000486867 ADCY10Q96PN6 1610 aa21.88■■□□□ 1.09
SF1-216ENST00000486867 SAMD9Q5K651 1589 aa21.87■■□□□ 1.09
SF1-216ENST00000486867 PTPRGP23470 1445 aa21.85■■□□□ 1.09
SF1-216ENST00000486867 UHRF1BP1LA0JNW5 1464 aa21.81■■□□□ 1.08
SF1-216ENST00000486867 MAPKBP1O60336 1514 aa21.75■■□□□ 1.07
SF1-216ENST00000486867 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
SF1-216ENST00000486867 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
SF1-216ENST00000486867 UACAQ9BZF9 1416 aa21.74■■□□□ 1.07
SF1-216ENST00000486867 ABCA8O94911 1581 aa21.74■■□□□ 1.07
SF1-216ENST00000486867 KIF13AQ9H1H9 1805 aa21.71■■□□□ 1.07
SF1-216ENST00000486867 KDM5BQ9UGL1 1544 aa21.69■■□□□ 1.06
SF1-216ENST00000486867 PLB1Q6P1J6 1458 aa21.66■■□□□ 1.06
SF1-216ENST00000486867 ZCCHC11Q5TAX3 1644 aaKnown RBP21.65■■□□□ 1.06
SF1-216ENST00000486867 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
SF1-216ENST00000486867 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
SF1-216ENST00000486867 DIP2BQ9P265 1576 aa21.61■■□□□ 1.05
SF1-216ENST00000486867 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
SF1-216ENST00000486867 NPM1P06748 294 aaKnown RBP eCLIP21.6■■□□□ 1.05
SF1-216ENST00000486867 FHOD3Q2V2M9 1422 aa21.59■■□□□ 1.05
SF1-216ENST00000486867 ABCC10Q5T3U5 1492 aa21.58■■□□□ 1.05
SF1-216ENST00000486867 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.05
SF1-216ENST00000486867 P3H3Q8IVL6 736 aa21.56■■□□□ 1.04
SF1-216ENST00000486867 TRHP20396 242 aaPredicted RBP21.54■■□□□ 1.04
SF1-216ENST00000486867 ASXL2Q76L83 1435 aa21.54■■□□□ 1.04
SF1-216ENST00000486867 GLI2P10070 1586 aa21.53■■□□□ 1.04
SF1-216ENST00000486867 EHMT2Q96KQ7 1210 aa21.51■■□□□ 1.03
SF1-216ENST00000486867 NUP153P49790 1475 aaKnown RBP21.5■■□□□ 1.03
SF1-216ENST00000486867 ATP10BO94823 1461 aa21.49■■□□□ 1.03
SF1-216ENST00000486867 FMN1Q68DA7 1419 aa21.47■■□□□ 1.03
SF1-216ENST00000486867 WDR7Q9Y4E6 1490 aa21.46■■□□□ 1.03
SF1-216ENST00000486867 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
SF1-216ENST00000486867 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
SF1-216ENST00000486867 MAP3K4Q9Y6R4 1608 aa21.44■■□□□ 1.02
SF1-216ENST00000486867 CLIP1P30622 1438 aa21.42■■□□□ 1.02
SF1-216ENST00000486867 PPRC1Q5VV67 1664 aaKnown RBP21.42■■□□□ 1.02
SF1-216ENST00000486867 HECW1Q76N89 1606 aa21.41■■□□□ 1.02
SF1-216ENST00000486867 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
SF1-216ENST00000486867 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
SF1-216ENST00000486867 TSPOAP1O95153 1857 aa21.39■■□□□ 1.02
SF1-216ENST00000486867 CFAP43Q8NDM7 1665 aa21.38■■□□□ 1.01
SF1-216ENST00000486867 PCF11O94913 1555 aaKnown RBP21.36■■□□□ 1.01
SF1-216ENST00000486867 CEP162Q5TB80 1403 aa21.35■■□□□ 1.01
SF1-216ENST00000486867 ABCA9Q8IUA7 1624 aa21.33■■□□□ 1.01
SF1-216ENST00000486867 CASKIN1Q8WXD9 1431 aa21.33■■□□□ 1.01
SF1-216ENST00000486867 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
SF1-216ENST00000486867 FYCO1Q9BQS8 1478 aa21.31■■□□□ 1
SF1-216ENST00000486867 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
SF1-216ENST00000486867 MAGI3Q5TCQ9 1506 aa21.26■□□□□ 0.99
SF1-216ENST00000486867 CCDC18Q5T9S5 1454 aa21.26■□□□□ 0.99
SF1-216ENST00000486867 ARID3CA6NKF2 412 aa21.25■□□□□ 0.99
SF1-216ENST00000486867 TEX14Q8IWB6 1497 aa21.23■□□□□ 0.99
SF1-216ENST00000486867 CD109Q6YHK3 1445 aa21.21■□□□□ 0.99
SF1-216ENST00000486867 PLEKHD1A6NEE1 506 aa21.2■□□□□ 0.98
SF1-216ENST00000486867 KDM6BO15054 1643 aa21.19■□□□□ 0.98
SF1-216ENST00000486867 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
SF1-216ENST00000486867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.982e-6■□□□□ 11.2
SF1-216ENST00000486867 TTC37Q6PGP7 1564 aa21.18■□□□□ 0.98
SF1-216ENST00000486867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
SF1-216ENST00000486867 HNRNPUL2Q1KMD3 747 aaKnown RBP21.17■□□□□ 0.98
SF1-216ENST00000486867 TROQ12816 1431 aaPredicted RBP21.16■□□□□ 0.98
SF1-216ENST00000486867 KIF14Q15058 1648 aa21.15■□□□□ 0.98
SF1-216ENST00000486867 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
SF1-216ENST00000486867 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
SF1-216ENST00000486867 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
SF1-216ENST00000486867 ARAP3Q8WWN8 1544 aa21.11■□□□□ 0.97
SF1-216ENST00000486867 ATP1B4Q9UN42 357 aaPredicted RBP21.11■□□□□ 0.97
SF1-216ENST00000486867 NEO1Q92859 1461 aa21.1■□□□□ 0.97
SF1-216ENST00000486867 COL17A1Q9UMD9 1497 aaPredicted RBP21.1■□□□□ 0.97
SF1-216ENST00000486867 CFAP74Q9C0B2 1584 aa21.1■□□□□ 0.97
SF1-216ENST00000486867 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
SF1-216ENST00000486867 CDC42BPBQ9Y5S2 1711 aa21.05■□□□□ 0.96
SF1-216ENST00000486867 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
SF1-216ENST00000486867 MAP3K1Q13233 1512 aa21.04■□□□□ 0.96
SF1-216ENST00000486867 PLCH2O75038 1416 aa21.04■□□□□ 0.96
SF1-216ENST00000486867 PREX2Q70Z35 1606 aa21.03■□□□□ 0.96
SF1-216ENST00000486867 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
SF1-216ENST00000486867 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
SF1-216ENST00000486867 FANCAO15360 1455 aa21.01■□□□□ 0.95
SF1-216ENST00000486867 RICTORQ6R327 1708 aa20.99■□□□□ 0.95
SF1-216ENST00000486867 FRMPD1Q5SYB0 1578 aa20.97■□□□□ 0.95
SF1-216ENST00000486867 AKNAQ7Z591 1439 aa20.95■□□□□ 0.95
SF1-216ENST00000486867 MTUS2Q5JR59 1369 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms