RNA–Protein interactions for RNA: ENST00000485837.5

PRKCI-205, Transcript of protein kinase C iota, humanhuman

TSL 2

Gene PRKCI, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-205ENST00000485837 NUP160Q12769 1436 aa17.21■□□□□ 0.34
PRKCI-205ENST00000485837 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
PRKCI-205ENST00000485837 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
PRKCI-205ENST00000485837 FHAD1B1AJZ9 1412 aa17.15■□□□□ 0.34
PRKCI-205ENST00000485837 TOP2BQ02880 1626 aa17.15■□□□□ 0.34
PRKCI-205ENST00000485837 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
PRKCI-205ENST00000485837 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
PRKCI-205ENST00000485837 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
PRKCI-205ENST00000485837 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
PRKCI-205ENST00000485837 TSPOAP1O95153 1857 aa17.07■□□□□ 0.32
PRKCI-205ENST00000485837 DIP2BQ9P265 1576 aa17.03■□□□□ 0.32
PRKCI-205ENST00000485837 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
PRKCI-205ENST00000485837 FAM69CQ0P6D2 419 aa17.02■□□□□ 0.32
PRKCI-205ENST00000485837 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
PRKCI-205ENST00000485837 KDM6BO15054 1643 aa17.01■□□□□ 0.31
PRKCI-205ENST00000485837 JPH4Q96JJ6 628 aa17■□□□□ 0.31
PRKCI-205ENST00000485837 MAPKBP1O60336 1514 aa17■□□□□ 0.31
PRKCI-205ENST00000485837 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRKCI-205ENST00000485837 CUL7Q14999 1698 aa16.87■□□□□ 0.29
PRKCI-205ENST00000485837 KDM4FA0A1W2PPD8 638 aa16.86■□□□□ 0.29
PRKCI-205ENST00000485837 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
PRKCI-205ENST00000485837 KIAA0586Q9BVV6 1533 aa16.85■□□□□ 0.29
PRKCI-205ENST00000485837 PPRC1Q5VV67 1664 aaKnown RBP16.81■□□□□ 0.28
PRKCI-205ENST00000485837 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
PRKCI-205ENST00000485837 PTPRGP23470 1445 aa16.77■□□□□ 0.27
PRKCI-205ENST00000485837 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
PRKCI-205ENST00000485837 IGF1RP08069 1367 aa16.75■□□□□ 0.27
PRKCI-205ENST00000485837 ABCC2Q92887 1545 aa16.75■□□□□ 0.27
PRKCI-205ENST00000485837 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
PRKCI-205ENST00000485837 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
PRKCI-205ENST00000485837 ASXL2Q76L83 1435 aa16.73■□□□□ 0.27
PRKCI-205ENST00000485837 IQGAP2Q13576 1575 aa16.72■□□□□ 0.27
PRKCI-205ENST00000485837 CARMIL2Q6F5E8 1435 aa16.71■□□□□ 0.27
PRKCI-205ENST00000485837 GLI2P10070 1586 aa16.71■□□□□ 0.27
PRKCI-205ENST00000485837 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
PRKCI-205ENST00000485837 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
PRKCI-205ENST00000485837 MAP3K4Q9Y6R4 1608 aa16.68■□□□□ 0.26
PRKCI-205ENST00000485837 ZCCHC11Q5TAX3 1644 aaKnown RBP16.67■□□□□ 0.26
PRKCI-205ENST00000485837 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
PRKCI-205ENST00000485837 HECW2Q9P2P5 1572 aa16.65■□□□□ 0.26
PRKCI-205ENST00000485837 UACAQ9BZF9 1416 aa16.63■□□□□ 0.25
PRKCI-205ENST00000485837 UHRF1BP1LA0JNW5 1464 aa16.63■□□□□ 0.25
PRKCI-205ENST00000485837 COL17A1Q9UMD9 1497 aaPredicted RBP16.62■□□□□ 0.25
PRKCI-205ENST00000485837 EPRSP07814 1512 aaKnown RBP16.62■□□□□ 0.25
PRKCI-205ENST00000485837 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
PRKCI-205ENST00000485837 TEX14Q8IWB6 1497 aa16.61■□□□□ 0.25
PRKCI-205ENST00000485837 KIAA0556O60303 1618 aa16.59■□□□□ 0.25
PRKCI-205ENST00000485837 KDM5BQ9UGL1 1544 aa16.58■□□□□ 0.24
PRKCI-205ENST00000485837 CTTNBP2Q8WZ74 1663 aa16.54■□□□□ 0.24
PRKCI-205ENST00000485837 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
PRKCI-205ENST00000485837 KIF21BO75037 1637 aa16.52■□□□□ 0.23
PRKCI-205ENST00000485837 CFAP43Q8NDM7 1665 aa16.51■□□□□ 0.23
PRKCI-205ENST00000485837 WDR7Q9Y4E6 1490 aa16.51■□□□□ 0.23
PRKCI-205ENST00000485837 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
PRKCI-205ENST00000485837 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
PRKCI-205ENST00000485837 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
PRKCI-205ENST00000485837 MAGI3Q5TCQ9 1506 aa16.41■□□□□ 0.22
PRKCI-205ENST00000485837 ABCA8O94911 1581 aa16.41■□□□□ 0.22
PRKCI-205ENST00000485837 GOLGA3Q08378 1498 aa16.38■□□□□ 0.21
PRKCI-205ENST00000485837 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
PRKCI-205ENST00000485837 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
PRKCI-205ENST00000485837 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
PRKCI-205ENST00000485837 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
PRKCI-205ENST00000485837 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
PRKCI-205ENST00000485837 FBXO41Q8TF61 875 aa16.28■□□□□ 0.2
PRKCI-205ENST00000485837 PTPRMP28827 1452 aa16.28■□□□□ 0.2
PRKCI-205ENST00000485837 BCORL1Q5H9F3 1711 aa16.27■□□□□ 0.19
PRKCI-205ENST00000485837 MADDQ8WXG6 1647 aa16.27■□□□□ 0.19
PRKCI-205ENST00000485837 P3H3Q8IVL6 736 aa16.25■□□□□ 0.19
PRKCI-205ENST00000485837 RIMS1Q86UR5 1692 aaKnown RBP16.24■□□□□ 0.19
PRKCI-205ENST00000485837 FRMPD1Q5SYB0 1578 aa16.24■□□□□ 0.19
PRKCI-205ENST00000485837 ATP10BO94823 1461 aa16.23■□□□□ 0.19
PRKCI-205ENST00000485837 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
PRKCI-205ENST00000485837 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
PRKCI-205ENST00000485837 RAPGEF3O95398 923 aa16.22■□□□□ 0.19
PRKCI-205ENST00000485837 ARID4BQ4LE39 1312 aaPredicted RBP16.21■□□□□ 0.19
PRKCI-205ENST00000485837 PRXQ9BXM0 1461 aa16.21■□□□□ 0.19
PRKCI-205ENST00000485837 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
PRKCI-205ENST00000485837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
PRKCI-205ENST00000485837 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
PRKCI-205ENST00000485837 ARHGEF40Q8TER5 1519 aa16.18■□□□□ 0.18
PRKCI-205ENST00000485837 SAMD9Q5K651 1589 aa16.17■□□□□ 0.18
PRKCI-205ENST00000485837 NEO1Q92859 1461 aa16.17■□□□□ 0.18
PRKCI-205ENST00000485837 LMTK3Q96Q04 1460 aa16.17■□□□□ 0.18
PRKCI-205ENST00000485837 RICTORQ6R327 1708 aa16.16■□□□□ 0.18
PRKCI-205ENST00000485837 PHLDB1Q86UU1 1377 aa16.16■□□□□ 0.18
PRKCI-205ENST00000485837 CFAP74Q9C0B2 1584 aa16.12■□□□□ 0.17
PRKCI-205ENST00000485837 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
PRKCI-205ENST00000485837 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
PRKCI-205ENST00000485837 FER1L4A9Z1Z3 1794 aa16.1■□□□□ 0.17
PRKCI-205ENST00000485837 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
PRKCI-205ENST00000485837 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
PRKCI-205ENST00000485837 HSPA2P54652 639 aa16.08■□□□□ 0.16
PRKCI-205ENST00000485837 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.16
PRKCI-205ENST00000485837 ZFYVE16Q7Z3T8 1539 aa16.06■□□□□ 0.16
PRKCI-205ENST00000485837 FANCAO15360 1455 aa16.06■□□□□ 0.16
PRKCI-205ENST00000485837 FHOD3Q2V2M9 1422 aa16.06■□□□□ 0.16
PRKCI-205ENST00000485837 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
PRKCI-205ENST00000485837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.04■□□□□ 0.16
PRKCI-205ENST00000485837 AKNAQ7Z591 1439 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms