RNA–Protein interactions for RNA: ENST00000485837.5

PRKCI-205, Transcript of protein kinase C iota, humanhuman

TSL 2

Gene PRKCI, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-205ENST00000485837 NISCHQ9Y2I1 1504 aa24.12■■□□□ 1.45
PRKCI-205ENST00000485837 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
PRKCI-205ENST00000485837 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
PRKCI-205ENST00000485837 ABCC9O60706 1549 aa22.18■■□□□ 1.14
PRKCI-205ENST00000485837 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
PRKCI-205ENST00000485837 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
PRKCI-205ENST00000485837 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
PRKCI-205ENST00000485837 NACADO15069 1562 aa20.68■□□□□ 0.9
PRKCI-205ENST00000485837 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
PRKCI-205ENST00000485837 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
PRKCI-205ENST00000485837 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
PRKCI-205ENST00000485837 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
PRKCI-205ENST00000485837 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
PRKCI-205ENST00000485837 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
PRKCI-205ENST00000485837 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
PRKCI-205ENST00000485837 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
PRKCI-205ENST00000485837 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
PRKCI-205ENST00000485837 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
PRKCI-205ENST00000485837 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
PRKCI-205ENST00000485837 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
PRKCI-205ENST00000485837 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
PRKCI-205ENST00000485837 DCAF1Q9Y4B6 1507 aa19.85■□□□□ 0.77
PRKCI-205ENST00000485837 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
PRKCI-205ENST00000485837 CUX2O14529 1486 aa19.18■□□□□ 0.66
PRKCI-205ENST00000485837 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
PRKCI-205ENST00000485837 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
PRKCI-205ENST00000485837 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
PRKCI-205ENST00000485837 NESP48681 1621 aa18.96■□□□□ 0.63
PRKCI-205ENST00000485837 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
PRKCI-205ENST00000485837 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
PRKCI-205ENST00000485837 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
PRKCI-205ENST00000485837 THOC2Q8NI27 1593 aaKnown RBP18.85■□□□□ 0.61
PRKCI-205ENST00000485837 FOXD1Q16676 465 aa18.85■□□□□ 0.61
PRKCI-205ENST00000485837 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
PRKCI-205ENST00000485837 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
PRKCI-205ENST00000485837 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
PRKCI-205ENST00000485837 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
PRKCI-205ENST00000485837 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
PRKCI-205ENST00000485837 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
PRKCI-205ENST00000485837 MROH2BQ7Z745 1585 aa18.62■□□□□ 0.57
PRKCI-205ENST00000485837 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
PRKCI-205ENST00000485837 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
PRKCI-205ENST00000485837 WDR62O43379 1518 aa18.47■□□□□ 0.55
PRKCI-205ENST00000485837 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
PRKCI-205ENST00000485837 WIZO95785 1651 aa18.45■□□□□ 0.54
PRKCI-205ENST00000485837 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
PRKCI-205ENST00000485837 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
PRKCI-205ENST00000485837 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
PRKCI-205ENST00000485837 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
PRKCI-205ENST00000485837 CFTRP13569 1480 aa18.19■□□□□ 0.5
PRKCI-205ENST00000485837 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
PRKCI-205ENST00000485837 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
PRKCI-205ENST00000485837 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
PRKCI-205ENST00000485837 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
PRKCI-205ENST00000485837 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
PRKCI-205ENST00000485837 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
PRKCI-205ENST00000485837 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
PRKCI-205ENST00000485837 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
PRKCI-205ENST00000485837 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
PRKCI-205ENST00000485837 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
PRKCI-205ENST00000485837 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
PRKCI-205ENST00000485837 CHD1O14646 1710 aa17.97■□□□□ 0.47
PRKCI-205ENST00000485837 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
PRKCI-205ENST00000485837 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
PRKCI-205ENST00000485837 CYB5RLQ6IPT4 315 aa17.86■□□□□ 0.45
PRKCI-205ENST00000485837 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
PRKCI-205ENST00000485837 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
PRKCI-205ENST00000485837 TARBP1Q13395 1621 aaKnown RBP17.82■□□□□ 0.44
PRKCI-205ENST00000485837 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
PRKCI-205ENST00000485837 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
PRKCI-205ENST00000485837 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRKCI-205ENST00000485837 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
PRKCI-205ENST00000485837 FBLN2P98095 1184 aa17.79■□□□□ 0.44
PRKCI-205ENST00000485837 ADRA2BP18089 450 aa17.78■□□□□ 0.44
PRKCI-205ENST00000485837 POLA1P09884 1462 aaPredicted RBP17.72■□□□□ 0.43
PRKCI-205ENST00000485837 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
PRKCI-205ENST00000485837 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
PRKCI-205ENST00000485837 TDRD9Q8NDG6 1382 aaKnown RBP17.64■□□□□ 0.41
PRKCI-205ENST00000485837 CLASP1Q7Z460 1538 aa17.62■□□□□ 0.41
PRKCI-205ENST00000485837 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
PRKCI-205ENST00000485837 SOGA1O94964 1423 aa17.61■□□□□ 0.41
PRKCI-205ENST00000485837 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
PRKCI-205ENST00000485837 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
PRKCI-205ENST00000485837 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
PRKCI-205ENST00000485837 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
PRKCI-205ENST00000485837 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
PRKCI-205ENST00000485837 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
PRKCI-205ENST00000485837 CUX1P39880 1505 aa17.52■□□□□ 0.39
PRKCI-205ENST00000485837 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
PRKCI-205ENST00000485837 SYNJ2O15056 1496 aa17.49■□□□□ 0.39
PRKCI-205ENST00000485837 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
PRKCI-205ENST00000485837 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
PRKCI-205ENST00000485837 ERCC6L2Q5T890 1561 aa17.37■□□□□ 0.37
PRKCI-205ENST00000485837 MSH5O43196 834 aa17.37■□□□□ 0.37
PRKCI-205ENST00000485837 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
PRKCI-205ENST00000485837 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
PRKCI-205ENST00000485837 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
PRKCI-205ENST00000485837 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
PRKCI-205ENST00000485837 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
PRKCI-205ENST00000485837 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 764.2 ms