RNA–Protein interactions for RNA: ENST00000483731.5

PKD1-216, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-216ENST00000483731 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
PKD1-216ENST00000483731 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
PKD1-216ENST00000483731 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
PKD1-216ENST00000483731 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
PKD1-216ENST00000483731 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
PKD1-216ENST00000483731 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.37
PKD1-216ENST00000483731 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
PKD1-216ENST00000483731 KCNH8Q96L42 1107 aa17.36■□□□□ 0.37
PKD1-216ENST00000483731 FKBP8Q14318 412 aa17.35■□□□□ 0.37
PKD1-216ENST00000483731 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
PKD1-216ENST00000483731 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.36
PKD1-216ENST00000483731 HIRIP3Q9BW71 556 aaPredicted RBP17.31■□□□□ 0.36
PKD1-216ENST00000483731 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
PKD1-216ENST00000483731 CFDP1Q9UEE9 299 aaPredicted RBP17.3■□□□□ 0.36
PKD1-216ENST00000483731 CFTRP13569 1480 aa17.29■□□□□ 0.36
PKD1-216ENST00000483731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
PKD1-216ENST00000483731 FMN1Q68DA7 1419 aa17.27■□□□□ 0.36
PKD1-216ENST00000483731 IGF1RP08069 1367 aa17.27■□□□□ 0.36
PKD1-216ENST00000483731 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.36
PKD1-216ENST00000483731 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.35
PKD1-216ENST00000483731 HMGXB3Q12766 1538 aa17.27■□□□□ 0.35
PKD1-216ENST00000483731 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
PKD1-216ENST00000483731 BCL11AQ9H165 835 aa17.26■□□□□ 0.35
PKD1-216ENST00000483731 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
PKD1-216ENST00000483731 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
PKD1-216ENST00000483731 FHOD3Q2V2M9 1422 aa17.22■□□□□ 0.35
PKD1-216ENST00000483731 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
PKD1-216ENST00000483731 SIN3AQ96ST3 1273 aa17.21■□□□□ 0.34
PKD1-216ENST00000483731 NESP48681 1621 aa17.18■□□□□ 0.34
PKD1-216ENST00000483731 SETD5Q9C0A6 1442 aa17.17■□□□□ 0.34
PKD1-216ENST00000483731 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
PKD1-216ENST00000483731 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.34
PKD1-216ENST00000483731 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.34
PKD1-216ENST00000483731 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.34
PKD1-216ENST00000483731 KIF21BO75037 1637 aa17.14■□□□□ 0.33
PKD1-216ENST00000483731 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
PKD1-216ENST00000483731 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
PKD1-216ENST00000483731 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
PKD1-216ENST00000483731 TOP2BQ02880 1626 aa17.13■□□□□ 0.33
PKD1-216ENST00000483731 CARMIL2Q6F5E8 1435 aa17.13■□□□□ 0.33
PKD1-216ENST00000483731 CHGAP10645 457 aaKnown RBP17.13■□□□□ 0.33
PKD1-216ENST00000483731 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
PKD1-216ENST00000483731 RAB3GAP2Q9H2M9 1393 aa17.1■□□□□ 0.33
PKD1-216ENST00000483731 TIMELESSQ9UNS1 1208 aa17.1■□□□□ 0.33
PKD1-216ENST00000483731 CUX1P39880 1505 aa17.09■□□□□ 0.33
PKD1-216ENST00000483731 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.32
PKD1-216ENST00000483731 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
PKD1-216ENST00000483731 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
PKD1-216ENST00000483731 HNRNPUQ00839 825 aaKnown RBP eCLIP17.05■□□□□ 0.32
PKD1-216ENST00000483731 JPH4Q96JJ6 628 aa17.04■□□□□ 0.32
PKD1-216ENST00000483731 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
PKD1-216ENST00000483731 FAM9BQ8IZU0 186 aa17.01■□□□□ 0.31
PKD1-216ENST00000483731 DAXXQ9UER7 740 aaPredicted RBP17■□□□□ 0.31
PKD1-216ENST00000483731 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.317e-7■■■■■ 49.8
PKD1-216ENST00000483731 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
PKD1-216ENST00000483731 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
PKD1-216ENST00000483731 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
PKD1-216ENST00000483731 FOXD1Q16676 465 aa16.97■□□□□ 0.31
PKD1-216ENST00000483731 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
PKD1-216ENST00000483731 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
PKD1-216ENST00000483731 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
PKD1-216ENST00000483731 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
PKD1-216ENST00000483731 CCDC18Q5T9S5 1454 aa16.94■□□□□ 0.3
PKD1-216ENST00000483731 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
PKD1-216ENST00000483731 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
PKD1-216ENST00000483731 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
PKD1-216ENST00000483731 MPHOSPH9Q99550 1183 aa16.91■□□□□ 0.3
PKD1-216ENST00000483731 CARD11Q9BXL7 1154 aa16.89■□□□□ 0.3
PKD1-216ENST00000483731 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
PKD1-216ENST00000483731 SENP3-EIF4A1A0A087X0R7 540 aa16.89■□□□□ 0.29
PKD1-216ENST00000483731 NBR1Q14596 966 aa16.89■□□□□ 0.29
PKD1-216ENST00000483731 PPP1R15AO75807 674 aaPredicted RBP16.88■□□□□ 0.29
PKD1-216ENST00000483731 LRRC9Q6ZRR7 1453 aa16.87■□□□□ 0.29
PKD1-216ENST00000483731 IRX6P78412 446 aaPredicted RBP16.87■□□□□ 0.29
PKD1-216ENST00000483731 PKD2Q13563 968 aa16.87■□□□□ 0.29
PKD1-216ENST00000483731 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
PKD1-216ENST00000483731 ANKRD30AQ9BXX3 1397 aa16.85■□□□□ 0.29
PKD1-216ENST00000483731 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
PKD1-216ENST00000483731 PHLDB1Q86UU1 1377 aa16.85■□□□□ 0.29
PKD1-216ENST00000483731 SALL2Q9Y467 1007 aaPredicted RBP16.85■□□□□ 0.29
PKD1-216ENST00000483731 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.29
PKD1-216ENST00000483731 EFCAB2Q5VUJ9 269 aa16.83■□□□□ 0.28
PKD1-216ENST00000483731 DCAF11Q8TEB1 546 aa16.81■□□□□ 0.28
PKD1-216ENST00000483731 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
PKD1-216ENST00000483731 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
PKD1-216ENST00000483731 PTPRGP23470 1445 aa16.81■□□□□ 0.28
PKD1-216ENST00000483731 NUP155O75694 1391 aa16.8■□□□□ 0.28
PKD1-216ENST00000483731 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
PKD1-216ENST00000483731 HNRNPMP52272 730 aaKnown RBP eCLIP16.8■□□□□ 0.28
PKD1-216ENST00000483731 RSPH4AQ5TD94 716 aa16.79■□□□□ 0.28
PKD1-216ENST00000483731 NEFMP07197 916 aa16.78■□□□□ 0.28
PKD1-216ENST00000483731 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
PKD1-216ENST00000483731 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
PKD1-216ENST00000483731 EFCAB5A4FU69 1503 aa16.77■□□□□ 0.28
PKD1-216ENST00000483731 MYOM3Q5VTT5 1437 aa16.77■□□□□ 0.28
PKD1-216ENST00000483731 RRBP1Q9P2E9 1410 aaKnown RBP16.77■□□□□ 0.28
PKD1-216ENST00000483731 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.28
PKD1-216ENST00000483731 PRKCSHP14314 528 aaPredicted RBP16.77■□□□□ 0.27
PKD1-216ENST00000483731 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
PKD1-216ENST00000483731 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms