RNA–Protein interactions for RNA: ENST00000483731.5

PKD1-216, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-216ENST00000483731 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
PKD1-216ENST00000483731 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
PKD1-216ENST00000483731 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
PKD1-216ENST00000483731 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
PKD1-216ENST00000483731 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
PKD1-216ENST00000483731 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
PKD1-216ENST00000483731 ABCC9O60706 1549 aa19.97■□□□□ 0.79
PKD1-216ENST00000483731 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
PKD1-216ENST00000483731 PCGF6Q9BYE7 350 aa19.84■□□□□ 0.77
PKD1-216ENST00000483731 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
PKD1-216ENST00000483731 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
PKD1-216ENST00000483731 HRCP23327 699 aa19.72■□□□□ 0.75
PKD1-216ENST00000483731 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
PKD1-216ENST00000483731 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
PKD1-216ENST00000483731 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
PKD1-216ENST00000483731 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
PKD1-216ENST00000483731 RANGAP1P46060 587 aaPredicted RBP19.51■□□□□ 0.71
PKD1-216ENST00000483731 APLP2Q06481 763 aa19.48■□□□□ 0.71
PKD1-216ENST00000483731 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
PKD1-216ENST00000483731 UBTFP17480 764 aaKnown RBP19.33■□□□□ 0.69
PKD1-216ENST00000483731 PPARGC1BQ86YN6 1023 aaKnown RBP19.29■□□□□ 0.68
PKD1-216ENST00000483731 ZEB1P37275 1124 aaPredicted RBP19.27■□□□□ 0.68
PKD1-216ENST00000483731 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
PKD1-216ENST00000483731 MYT1Q01538 1121 aa19.18■□□□□ 0.66
PKD1-216ENST00000483731 TRIM26Q12899 539 aaPredicted RBP19.07■□□□□ 0.64
PKD1-216ENST00000483731 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
PKD1-216ENST00000483731 CENPBP07199 599 aaPredicted RBP19.02■□□□□ 0.64
PKD1-216ENST00000483731 ATP1B4Q9UN42 357 aaPredicted RBP19■□□□□ 0.63
PKD1-216ENST00000483731 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
PKD1-216ENST00000483731 CCER1Q8TC90 406 aaPredicted RBP18.98■□□□□ 0.63
PKD1-216ENST00000483731 NACADO15069 1562 aa18.94■□□□□ 0.62
PKD1-216ENST00000483731 RB1CC1Q8TDY2 1594 aa18.91■□□□□ 0.62
PKD1-216ENST00000483731 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
PKD1-216ENST00000483731 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
PKD1-216ENST00000483731 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
PKD1-216ENST00000483731 ITGAEP38570 1179 aa18.55■□□□□ 0.56
PKD1-216ENST00000483731 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
PKD1-216ENST00000483731 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
PKD1-216ENST00000483731 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
PKD1-216ENST00000483731 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
PKD1-216ENST00000483731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
PKD1-216ENST00000483731 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
PKD1-216ENST00000483731 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
PKD1-216ENST00000483731 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.53
PKD1-216ENST00000483731 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
PKD1-216ENST00000483731 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
PKD1-216ENST00000483731 P3H3Q8IVL6 736 aa18.29■□□□□ 0.52
PKD1-216ENST00000483731 FBLN2P98095 1184 aa18.26■□□□□ 0.51
PKD1-216ENST00000483731 WRNQ14191 1432 aaPredicted RBP eCLIP18.21■□□□□ 0.51
PKD1-216ENST00000483731 FAM50AQ14320 339 aaKnown RBP18.19■□□□□ 0.5
PKD1-216ENST00000483731 EEA1Q15075 1411 aa18.19■□□□□ 0.5
PKD1-216ENST00000483731 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
PKD1-216ENST00000483731 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
PKD1-216ENST00000483731 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
PKD1-216ENST00000483731 WIZO95785 1651 aa18.11■□□□□ 0.49
PKD1-216ENST00000483731 ERICH6Q7L0X2 663 aa18.04■□□□□ 0.48
PKD1-216ENST00000483731 GOLGA3Q08378 1498 aa18.04■□□□□ 0.48
PKD1-216ENST00000483731 CLIP1P30622 1438 aa18.03■□□□□ 0.48
PKD1-216ENST00000483731 CEP162Q5TB80 1403 aa18.02■□□□□ 0.47
PKD1-216ENST00000483731 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
PKD1-216ENST00000483731 SMARCA2P51531 1590 aa18■□□□□ 0.47
PKD1-216ENST00000483731 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
PKD1-216ENST00000483731 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
PKD1-216ENST00000483731 NEFLP07196 543 aa17.97■□□□□ 0.47
PKD1-216ENST00000483731 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
PKD1-216ENST00000483731 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
PKD1-216ENST00000483731 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
PKD1-216ENST00000483731 SOGA1O94964 1423 aa17.95■□□□□ 0.46
PKD1-216ENST00000483731 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
PKD1-216ENST00000483731 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
PKD1-216ENST00000483731 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
PKD1-216ENST00000483731 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
PKD1-216ENST00000483731 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.45
PKD1-216ENST00000483731 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
PKD1-216ENST00000483731 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
PKD1-216ENST00000483731 RUSC2Q8N2Y8 1516 aa17.73■□□□□ 0.43
PKD1-216ENST00000483731 ZNF777Q9ULD5 760 aaPredicted RBP17.71■□□□□ 0.43
PKD1-216ENST00000483731 CUX2O14529 1486 aa17.71■□□□□ 0.43
PKD1-216ENST00000483731 MTUS2Q5JR59 1369 aa17.68■□□□□ 0.42
PKD1-216ENST00000483731 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
PKD1-216ENST00000483731 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
PKD1-216ENST00000483731 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
PKD1-216ENST00000483731 CLSPNQ9HAW4 1339 aa17.62■□□□□ 0.41
PKD1-216ENST00000483731 BCANQ96GW7 911 aa17.62■□□□□ 0.41
PKD1-216ENST00000483731 MIER1Q8N108 512 aa17.6■□□□□ 0.41
PKD1-216ENST00000483731 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
PKD1-216ENST00000483731 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.4
PKD1-216ENST00000483731 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
PKD1-216ENST00000483731 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
PKD1-216ENST00000483731 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
PKD1-216ENST00000483731 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
PKD1-216ENST00000483731 ANP32CO43423 234 aa17.51■□□□□ 0.39
PKD1-216ENST00000483731 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
PKD1-216ENST00000483731 TDRD9Q8NDG6 1382 aaKnown RBP17.5■□□□□ 0.39
PKD1-216ENST00000483731 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
PKD1-216ENST00000483731 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
PKD1-216ENST00000483731 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
PKD1-216ENST00000483731 ANP32EQ9BTT0 268 aa17.42■□□□□ 0.38
PKD1-216ENST00000483731 CCNB3Q8WWL7 1395 aa17.42■□□□□ 0.38
PKD1-216ENST00000483731 KANK4Q5T7N3 995 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms