RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 RIMBP3CA6NJZ7 1639 aa27.79■■■□□ 2.04
SF1-215ENST00000482693 RIMBP3BA6NNM3 1639 aa27.79■■■□□ 2.04
SF1-215ENST00000482693 RIMBP3Q9UFD9 1639 aa27.79■■■□□ 2.04
SF1-215ENST00000482693 JPH4Q96JJ6 628 aa27.78■■■□□ 2.04
SF1-215ENST00000482693 SHROOM2Q13796 1616 aa27.73■■■□□ 2.03
SF1-215ENST00000482693 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
SF1-215ENST00000482693 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
SF1-215ENST00000482693 IQGAP2Q13576 1575 aa27.64■■■□□ 2.01
SF1-215ENST00000482693 ARAP1Q96P48 1450 aa27.63■■■□□ 2.01
SF1-215ENST00000482693 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
SF1-215ENST00000482693 KIF21BO75037 1637 aa27.59■■■□□ 2.01
SF1-215ENST00000482693 CARMIL2Q6F5E8 1435 aa27.53■■■□□ 2
SF1-215ENST00000482693 CTTNBP2Q8WZ74 1663 aa27.52■■■□□ 2
SF1-215ENST00000482693 UGGT2Q9NYU1 1516 aa27.51■■■□□ 2
SF1-215ENST00000482693 GOLGA3Q08378 1498 aa27.48■■□□□ 1.99
SF1-215ENST00000482693 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.98
SF1-215ENST00000482693 DISP1Q96F81 1524 aa27.45■■□□□ 1.98
SF1-215ENST00000482693 EHMT2Q96KQ7 1210 aa27.43■■□□□ 1.98
SF1-215ENST00000482693 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
SF1-215ENST00000482693 PTPRGP23470 1445 aa27.4■■□□□ 1.98
SF1-215ENST00000482693 KIAA0556O60303 1618 aa27.35■■□□□ 1.97
SF1-215ENST00000482693 TTBK1Q5TCY1 1321 aaPredicted RBP27.31■■□□□ 1.96
SF1-215ENST00000482693 RANGAP1P46060 587 aaPredicted RBP27.28■■□□□ 1.96
SF1-215ENST00000482693 P3H3Q8IVL6 736 aa27.25■■□□□ 1.95
SF1-215ENST00000482693 SAMD9Q5K651 1589 aa27.24■■□□□ 1.95
SF1-215ENST00000482693 NPM1P06748 294 aaKnown RBP eCLIP27.2■■□□□ 1.94
SF1-215ENST00000482693 UACAQ9BZF9 1416 aa27.2■■□□□ 1.94
SF1-215ENST00000482693 EFCAB5A4FU69 1503 aa27.2■■□□□ 1.94
SF1-215ENST00000482693 UHRF1BP1LA0JNW5 1464 aa27.17■■□□□ 1.94
SF1-215ENST00000482693 ADCY10Q96PN6 1610 aa27.16■■□□□ 1.94
SF1-215ENST00000482693 ABCC2Q92887 1545 aa27.11■■□□□ 1.93
SF1-215ENST00000482693 FHOD3Q2V2M9 1422 aa27.11■■□□□ 1.93
SF1-215ENST00000482693 PLB1Q6P1J6 1458 aa27.09■■□□□ 1.93
SF1-215ENST00000482693 LOC105371045A0A1W2PR82 267 aa27.08■■□□□ 1.93
SF1-215ENST00000482693 ARHGAP35Q9NRY4 1499 aa27.07■■□□□ 1.92
SF1-215ENST00000482693 ABCA8O94911 1581 aa27.06■■□□□ 1.92
SF1-215ENST00000482693 KDM5BQ9UGL1 1544 aa27.02■■□□□ 1.92
SF1-215ENST00000482693 TRHP20396 242 aaPredicted RBP27.02■■□□□ 1.92
SF1-215ENST00000482693 CLIP1P30622 1438 aa27.01■■□□□ 1.91
SF1-215ENST00000482693 MAPKBP1O60336 1514 aa27■■□□□ 1.91
SF1-215ENST00000482693 FMN1Q68DA7 1419 aa26.98■■□□□ 1.91
SF1-215ENST00000482693 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
SF1-215ENST00000482693 CEP162Q5TB80 1403 aa26.91■■□□□ 1.9
SF1-215ENST00000482693 ASXL2Q76L83 1435 aa26.9■■□□□ 1.9
SF1-215ENST00000482693 ZCCHC11Q5TAX3 1644 aaKnown RBP26.9■■□□□ 1.9
SF1-215ENST00000482693 ATP10BO94823 1461 aa26.87■■□□□ 1.89
SF1-215ENST00000482693 NUP153P49790 1475 aaKnown RBP26.87■■□□□ 1.89
SF1-215ENST00000482693 ABCC10Q5T3U5 1492 aa26.87■■□□□ 1.89
SF1-215ENST00000482693 ARID3CA6NKF2 412 aa26.86■■□□□ 1.89
SF1-215ENST00000482693 FAM69CQ0P6D2 419 aa26.84■■□□□ 1.89
SF1-215ENST00000482693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.82■■□□□ 1.88
SF1-215ENST00000482693 HNRNPUL2Q1KMD3 747 aaKnown RBP26.82■■□□□ 1.88
SF1-215ENST00000482693 ATP1B4Q9UN42 357 aaPredicted RBP26.81■■□□□ 1.88
SF1-215ENST00000482693 WDR7Q9Y4E6 1490 aa26.79■■□□□ 1.88
SF1-215ENST00000482693 CASKIN1Q8WXD9 1431 aa26.78■■□□□ 1.88
SF1-215ENST00000482693 HECW1Q76N89 1606 aa26.76■■□□□ 1.87
SF1-215ENST00000482693 DIP2BQ9P265 1576 aa26.76■■□□□ 1.87
SF1-215ENST00000482693 EPRSP07814 1512 aaKnown RBP26.74■■□□□ 1.87
SF1-215ENST00000482693 PLEKHD1A6NEE1 506 aa26.73■■□□□ 1.87
SF1-215ENST00000482693 KCNH8Q96L42 1107 aa26.72■■□□□ 1.87
SF1-215ENST00000482693 KIF13AQ9H1H9 1805 aa26.72■■□□□ 1.87
SF1-215ENST00000482693 GLI2P10070 1586 aa26.71■■□□□ 1.87
SF1-215ENST00000482693 FYCO1Q9BQS8 1478 aa26.7■■□□□ 1.87
SF1-215ENST00000482693 PCF11O94913 1555 aaKnown RBP26.68■■□□□ 1.86
SF1-215ENST00000482693 CDK11AQ9UQ88 783 aaPredicted RBP26.68■■□□□ 1.86
SF1-215ENST00000482693 CDK13Q14004 1512 aaKnown RBP26.67■■□□□ 1.86
SF1-215ENST00000482693 CCDC18Q5T9S5 1454 aa26.64■■□□□ 1.86
SF1-215ENST00000482693 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
SF1-215ENST00000482693 CD109Q6YHK3 1445 aa26.55■■□□□ 1.84
SF1-215ENST00000482693 MAP3K4Q9Y6R4 1608 aa26.54■■□□□ 1.84
SF1-215ENST00000482693 LRRIQ1Q96JM4 1722 aa26.54■■□□□ 1.84
SF1-215ENST00000482693 TROQ12816 1431 aaPredicted RBP26.52■■□□□ 1.84
SF1-215ENST00000482693 CFAP43Q8NDM7 1665 aa26.5■■□□□ 1.83
SF1-215ENST00000482693 ABCA9Q8IUA7 1624 aa26.5■■□□□ 1.83
SF1-215ENST00000482693 TEX14Q8IWB6 1497 aa26.49■■□□□ 1.83
SF1-215ENST00000482693 MAGI3Q5TCQ9 1506 aa26.48■■□□□ 1.83
SF1-215ENST00000482693 TSPOAP1O95153 1857 aa26.47■■□□□ 1.83
SF1-215ENST00000482693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.44■■□□□ 1.821e-8■■■■□ 19.9
SF1-215ENST00000482693 PPRC1Q5VV67 1664 aaKnown RBP26.43■■□□□ 1.82
SF1-215ENST00000482693 KIF14Q15058 1648 aa26.4■■□□□ 1.82
SF1-215ENST00000482693 MTUS2Q5JR59 1369 aa26.4■■□□□ 1.82
SF1-215ENST00000482693 PHLDB1Q86UU1 1377 aa26.36■■□□□ 1.81
SF1-215ENST00000482693 MAP3K1Q13233 1512 aa26.36■■□□□ 1.81
SF1-215ENST00000482693 APLP2Q06481 763 aa26.36■■□□□ 1.81
SF1-215ENST00000482693 TTC37Q6PGP7 1564 aa26.36■■□□□ 1.81
SF1-215ENST00000482693 TIAM1Q13009 1591 aa26.34■■□□□ 1.81
SF1-215ENST00000482693 PLCH2O75038 1416 aa26.34■■□□□ 1.81
SF1-215ENST00000482693 NEO1Q92859 1461 aa26.32■■□□□ 1.8
SF1-215ENST00000482693 EHBP1L1Q8N3D4 1523 aa26.3■■□□□ 1.8
SF1-215ENST00000482693 KDM6BO15054 1643 aa26.28■■□□□ 1.8
SF1-215ENST00000482693 EFCAB2Q5VUJ9 269 aa26.28■■□□□ 1.8
SF1-215ENST00000482693 FANCAO15360 1455 aa26.28■■□□□ 1.8
SF1-215ENST00000482693 ARAP3Q8WWN8 1544 aa26.28■■□□□ 1.8
SF1-215ENST00000482693 LRRC9Q6ZRR7 1453 aa26.27■■□□□ 1.8
SF1-215ENST00000482693 COL17A1Q9UMD9 1497 aaPredicted RBP26.25■■□□□ 1.79
SF1-215ENST00000482693 KANK4Q5T7N3 995 aaPredicted RBP26.24■■□□□ 1.79
SF1-215ENST00000482693 AKNAQ7Z591 1439 aa26.23■■□□□ 1.79
SF1-215ENST00000482693 MYO5CQ9NQX4 1742 aa26.23■■□□□ 1.79
SF1-215ENST00000482693 CFAP74Q9C0B2 1584 aa26.23■■□□□ 1.79
SF1-215ENST00000482693 CCNB3Q8WWL7 1395 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms