RNA–Protein interactions for RNA: ENST00000482446.5

RNFT1-204, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 1 (best)

Gene RNFT1, Length 1,893 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-204ENST00000482446 EFCAB5A4FU69 1503 aa24.42■■□□□ 1.5
RNFT1-204ENST00000482446 ZNF608Q9ULD9 1512 aaPredicted RBP24.41■■□□□ 1.5
RNFT1-204ENST00000482446 APLP2Q06481 763 aa24.41■■□□□ 1.5
RNFT1-204ENST00000482446 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
RNFT1-204ENST00000482446 TTBK1Q5TCY1 1321 aaPredicted RBP24.37■■□□□ 1.49
RNFT1-204ENST00000482446 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
RNFT1-204ENST00000482446 SAMD9Q5K651 1589 aa24.28■■□□□ 1.48
RNFT1-204ENST00000482446 MAP3K1Q13233 1512 aa24.25■■□□□ 1.47
RNFT1-204ENST00000482446 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
RNFT1-204ENST00000482446 FHOD3Q2V2M9 1422 aa24.25■■□□□ 1.47
RNFT1-204ENST00000482446 PCF11O94913 1555 aaKnown RBP24.23■■□□□ 1.47
RNFT1-204ENST00000482446 MAGI1Q96QZ7 1491 aaPredicted RBP24.21■■□□□ 1.47
RNFT1-204ENST00000482446 TIAM1Q13009 1591 aa24.2■■□□□ 1.47
RNFT1-204ENST00000482446 IQGAP2Q13576 1575 aa24.2■■□□□ 1.46
RNFT1-204ENST00000482446 FYCO1Q9BQS8 1478 aa24.18■■□□□ 1.46
RNFT1-204ENST00000482446 CFAP43Q8NDM7 1665 aa24.17■■□□□ 1.46
RNFT1-204ENST00000482446 FMN1Q68DA7 1419 aa24.17■■□□□ 1.46
RNFT1-204ENST00000482446 KANK4Q5T7N3 995 aaPredicted RBP24.15■■□□□ 1.46
RNFT1-204ENST00000482446 P3H3Q8IVL6 736 aa24.15■■□□□ 1.46
RNFT1-204ENST00000482446 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
RNFT1-204ENST00000482446 CASKIN1Q8WXD9 1431 aa24.15■■□□□ 1.46
RNFT1-204ENST00000482446 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
RNFT1-204ENST00000482446 KIAA0586Q9BVV6 1533 aa24.08■■□□□ 1.45
RNFT1-204ENST00000482446 UGGT2Q9NYU1 1516 aa24.08■■□□□ 1.45
RNFT1-204ENST00000482446 LRRC9Q6ZRR7 1453 aa24.07■■□□□ 1.44
RNFT1-204ENST00000482446 ZEB1P37275 1124 aaPredicted RBP24.05■■□□□ 1.44
RNFT1-204ENST00000482446 RRBP1Q9P2E9 1410 aaKnown RBP24.03■■□□□ 1.44
RNFT1-204ENST00000482446 CEP170Q5SW79 1584 aa24■■□□□ 1.43
RNFT1-204ENST00000482446 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
RNFT1-204ENST00000482446 KIAA0556O60303 1618 aa23.96■■□□□ 1.43
RNFT1-204ENST00000482446 NUP160Q12769 1436 aa23.96■■□□□ 1.43
RNFT1-204ENST00000482446 LRRIQ1Q96JM4 1722 aa23.95■■□□□ 1.43
RNFT1-204ENST00000482446 DISP1Q96F81 1524 aa23.93■■□□□ 1.42
RNFT1-204ENST00000482446 ATP1B4Q9UN42 357 aaPredicted RBP23.93■■□□□ 1.42
RNFT1-204ENST00000482446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
RNFT1-204ENST00000482446 HECW1Q76N89 1606 aa23.91■■□□□ 1.42
RNFT1-204ENST00000482446 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
RNFT1-204ENST00000482446 HNRNPUL2Q1KMD3 747 aaKnown RBP23.9■■□□□ 1.42
RNFT1-204ENST00000482446 CCDC18Q5T9S5 1454 aa23.88■■□□□ 1.41
RNFT1-204ENST00000482446 CCER1Q8TC90 406 aaPredicted RBP23.87■■□□□ 1.41
RNFT1-204ENST00000482446 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
RNFT1-204ENST00000482446 FBLN2P98095 1184 aa23.85■■□□□ 1.41
RNFT1-204ENST00000482446 EHBP1L1Q8N3D4 1523 aa23.82■■□□□ 1.4
RNFT1-204ENST00000482446 MTUS2Q5JR59 1369 aa23.8■■□□□ 1.4
RNFT1-204ENST00000482446 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
RNFT1-204ENST00000482446 CHD1O14646 1710 aa23.78■■□□□ 1.4
RNFT1-204ENST00000482446 SUPT6HQ7KZ85 1726 aaKnown RBP23.76■■□□□ 1.39
RNFT1-204ENST00000482446 CARMIL2Q6F5E8 1435 aa23.75■■□□□ 1.39
RNFT1-204ENST00000482446 RAPGEF6Q8TEU7 1601 aa23.75■■□□□ 1.39
RNFT1-204ENST00000482446 MAGI3Q5TCQ9 1506 aa23.74■■□□□ 1.39
RNFT1-204ENST00000482446 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
RNFT1-204ENST00000482446 NCOA2Q15596 1464 aa23.72■■□□□ 1.39
RNFT1-204ENST00000482446 CDK13Q14004 1512 aaKnown RBP23.71■■□□□ 1.39
RNFT1-204ENST00000482446 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
RNFT1-204ENST00000482446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.38
RNFT1-204ENST00000482446 NUP153P49790 1475 aaKnown RBP23.69■■□□□ 1.38
RNFT1-204ENST00000482446 FGD6Q6ZV73 1430 aa23.68■■□□□ 1.38
RNFT1-204ENST00000482446 MYOM3Q5VTT5 1437 aa23.65■■□□□ 1.38
RNFT1-204ENST00000482446 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
RNFT1-204ENST00000482446 PLB1Q6P1J6 1458 aa23.61■■□□□ 1.37
RNFT1-204ENST00000482446 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
RNFT1-204ENST00000482446 ABCA8O94911 1581 aa23.58■■□□□ 1.36
RNFT1-204ENST00000482446 PRG4Q92954 1404 aaPredicted RBP23.58■■□□□ 1.36
RNFT1-204ENST00000482446 ITGAEP38570 1179 aa23.58■■□□□ 1.36
RNFT1-204ENST00000482446 PTPN23Q9H3S7 1636 aa23.54■■□□□ 1.36
RNFT1-204ENST00000482446 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
RNFT1-204ENST00000482446 ARID3CA6NKF2 412 aa23.52■■□□□ 1.36
RNFT1-204ENST00000482446 TCOF1Q13428 1488 aaKnown RBP23.51■■□□□ 1.35
RNFT1-204ENST00000482446 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
RNFT1-204ENST00000482446 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
RNFT1-204ENST00000482446 CDK11AQ9UQ88 783 aaPredicted RBP23.5■■□□□ 1.35
RNFT1-204ENST00000482446 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
RNFT1-204ENST00000482446 RAB3GAP2Q9H2M9 1393 aa23.49■■□□□ 1.35
RNFT1-204ENST00000482446 MIA2Q96PC5 1412 aa23.49■■□□□ 1.35
RNFT1-204ENST00000482446 TROQ12816 1431 aaPredicted RBP23.48■■□□□ 1.35
RNFT1-204ENST00000482446 ADCY10Q96PN6 1610 aa23.47■■□□□ 1.35
RNFT1-204ENST00000482446 PTPRGP23470 1445 aa23.46■■□□□ 1.35
RNFT1-204ENST00000482446 PTPRKQ15262 1439 aa23.41■■□□□ 1.34
RNFT1-204ENST00000482446 ATP10BO94823 1461 aa23.4■■□□□ 1.34
RNFT1-204ENST00000482446 ERCC6L2Q5T890 1561 aa23.39■■□□□ 1.33
RNFT1-204ENST00000482446 HFM1A2PYH4 1435 aa23.38■■□□□ 1.33
RNFT1-204ENST00000482446 ITSN2Q9NZM3 1697 aa23.38■■□□□ 1.33
RNFT1-204ENST00000482446 KIF14Q15058 1648 aa23.37■■□□□ 1.33
RNFT1-204ENST00000482446 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
RNFT1-204ENST00000482446 AKNAQ7Z591 1439 aa23.31■■□□□ 1.32
RNFT1-204ENST00000482446 ABCC2Q92887 1545 aa23.31■■□□□ 1.32
RNFT1-204ENST00000482446 MAPKBP1O60336 1514 aa23.3■■□□□ 1.32
RNFT1-204ENST00000482446 NAIPQ13075 1403 aa23.3■■□□□ 1.32
RNFT1-204ENST00000482446 GCC2Q8IWJ2 1684 aa23.29■■□□□ 1.32
RNFT1-204ENST00000482446 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
RNFT1-204ENST00000482446 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
RNFT1-204ENST00000482446 DNMT1P26358 1616 aaKnown RBP23.29■■□□□ 1.32
RNFT1-204ENST00000482446 ABCC10Q5T3U5 1492 aa23.27■■□□□ 1.32
RNFT1-204ENST00000482446 DAPK1P53355 1430 aa23.24■■□□□ 1.31
RNFT1-204ENST00000482446 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
RNFT1-204ENST00000482446 CDC42BPAQ5VT25 1732 aa23.24■■□□□ 1.31
RNFT1-204ENST00000482446 UHRF1BP1LA0JNW5 1464 aa23.22■■□□□ 1.31
RNFT1-204ENST00000482446 CFDP1Q9UEE9 299 aaPredicted RBP23.2■■□□□ 1.3
RNFT1-204ENST00000482446 ABCC5O15440 1437 aa23.2■■□□□ 1.3
RNFT1-204ENST00000482446 ROCK1Q13464 1354 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms