RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 CTTNBP2Q8WZ74 1663 aa30.27■■■□□ 2.44
CHKB-209ENST00000481673 MAP3K1Q13233 1512 aa30.26■■■□□ 2.44
CHKB-209ENST00000481673 AQRO60306 1485 aaKnown RBP eCLIP30.24■■■□□ 2.433e-8■■■■■ 28.1
CHKB-209ENST00000481673 PBRM1Q86U86 1689 aa30.21■■■□□ 2.43
CHKB-209ENST00000481673 THOC2Q8NI27 1593 aaKnown RBP30.19■■■□□ 2.42
CHKB-209ENST00000481673 ADAMTS12P58397 1594 aa30.14■■■□□ 2.42
CHKB-209ENST00000481673 FMN1Q68DA7 1419 aa30.12■■■□□ 2.41
CHKB-209ENST00000481673 KANK4Q5T7N3 995 aaPredicted RBP30.11■■■□□ 2.41
CHKB-209ENST00000481673 ZNF608Q9ULD9 1512 aaPredicted RBP30.1■■■□□ 2.41
CHKB-209ENST00000481673 FHOD3Q2V2M9 1422 aa30.07■■■□□ 2.4
CHKB-209ENST00000481673 FYCO1Q9BQS8 1478 aa30.07■■■□□ 2.4
CHKB-209ENST00000481673 CASKIN1Q8WXD9 1431 aa30.06■■■□□ 2.4
CHKB-209ENST00000481673 TIAM1Q13009 1591 aa30.06■■■□□ 2.4
CHKB-209ENST00000481673 SAMD9Q5K651 1589 aa30.05■■■□□ 2.4
CHKB-209ENST00000481673 P3H3Q8IVL6 736 aa30.04■■■□□ 2.4
CHKB-209ENST00000481673 CCER1Q8TC90 406 aaPredicted RBP30.02■■■□□ 2.4
CHKB-209ENST00000481673 EIF4G3O43432 1585 aaKnown RBP30■■■□□ 2.39
CHKB-209ENST00000481673 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
CHKB-209ENST00000481673 RRBP1Q9P2E9 1410 aaKnown RBP29.98■■■□□ 2.39
CHKB-209ENST00000481673 LRRC9Q6ZRR7 1453 aa29.97■■■□□ 2.39
CHKB-209ENST00000481673 PCF11O94913 1555 aaKnown RBP29.96■■■□□ 2.39
CHKB-209ENST00000481673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.96■■■□□ 2.39
CHKB-209ENST00000481673 IQGAP2Q13576 1575 aa29.96■■■□□ 2.39
CHKB-209ENST00000481673 SNAPC4Q5SXM2 1469 aa29.95■■■□□ 2.38
CHKB-209ENST00000481673 KIAA0586Q9BVV6 1533 aa29.9■■■□□ 2.38
CHKB-209ENST00000481673 CFAP43Q8NDM7 1665 aa29.9■■■□□ 2.38
CHKB-209ENST00000481673 HNRNPUL2Q1KMD3 747 aaKnown RBP29.89■■■□□ 2.38
CHKB-209ENST00000481673 GRIN2AQ12879 1464 aa29.89■■■□□ 2.38
CHKB-209ENST00000481673 CCNB3Q8WWL7 1395 aa29.86■■■□□ 2.37
CHKB-209ENST00000481673 UGGT2Q9NYU1 1516 aa29.86■■■□□ 2.37
CHKB-209ENST00000481673 SYNJ2O15056 1496 aa29.85■■■□□ 2.37
CHKB-209ENST00000481673 ATP1B4Q9UN42 357 aaPredicted RBP29.85■■■□□ 2.37
CHKB-209ENST00000481673 CHMP7Q8WUX9 453 aaPredicted RBP29.82■■■□□ 2.36
CHKB-209ENST00000481673 CCDC18Q5T9S5 1454 aa29.71■■■□□ 2.35
CHKB-209ENST00000481673 PHLDB1Q86UU1 1377 aa29.68■■■□□ 2.34
CHKB-209ENST00000481673 MTUS2Q5JR59 1369 aa29.67■■■□□ 2.34
CHKB-209ENST00000481673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.67■■■□□ 2.34
CHKB-209ENST00000481673 NUP160Q12769 1436 aa29.67■■■□□ 2.34
CHKB-209ENST00000481673 HECW1Q76N89 1606 aa29.64■■■□□ 2.34
CHKB-209ENST00000481673 DISP1Q96F81 1524 aa29.63■■■□□ 2.33
CHKB-209ENST00000481673 KIAA0556O60303 1618 aa29.61■■■□□ 2.33
CHKB-209ENST00000481673 FBLN2P98095 1184 aa29.61■■■□□ 2.33
CHKB-209ENST00000481673 CLSPNQ9HAW4 1339 aa29.6■■■□□ 2.33
CHKB-209ENST00000481673 CEP170Q5SW79 1584 aa29.59■■■□□ 2.33
CHKB-209ENST00000481673 EHBP1L1Q8N3D4 1523 aa29.58■■■□□ 2.33
CHKB-209ENST00000481673 CARMIL2Q6F5E8 1435 aa29.56■■■□□ 2.32
CHKB-209ENST00000481673 EPRSP07814 1512 aaKnown RBP29.53■■■□□ 2.32
CHKB-209ENST00000481673 JPH4Q96JJ6 628 aa29.53■■■□□ 2.32
CHKB-209ENST00000481673 LRRIQ1Q96JM4 1722 aa29.5■■■□□ 2.31
CHKB-209ENST00000481673 FGD6Q6ZV73 1430 aa29.48■■■□□ 2.31
CHKB-209ENST00000481673 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
CHKB-209ENST00000481673 SUPT6HQ7KZ85 1726 aaKnown RBP29.48■■■□□ 2.31
CHKB-209ENST00000481673 NCOA2Q15596 1464 aa29.47■■■□□ 2.31
CHKB-209ENST00000481673 MYOM3Q5VTT5 1437 aa29.44■■■□□ 2.3
CHKB-209ENST00000481673 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
CHKB-209ENST00000481673 ITGAEP38570 1179 aa29.42■■■□□ 2.3
CHKB-209ENST00000481673 CDK11AQ9UQ88 783 aaPredicted RBP29.42■■■□□ 2.3
CHKB-209ENST00000481673 DHX57Q6P158 1386 aaKnown RBP29.4■■■□□ 2.3
CHKB-209ENST00000481673 RAPGEF6Q8TEU7 1601 aa29.39■■■□□ 2.29
CHKB-209ENST00000481673 SETD5Q9C0A6 1442 aa29.39■■■□□ 2.29
CHKB-209ENST00000481673 NUP153P49790 1475 aaKnown RBP29.36■■■□□ 2.29
CHKB-209ENST00000481673 MAGI3Q5TCQ9 1506 aa29.35■■■□□ 2.29
CHKB-209ENST00000481673 CDK13Q14004 1512 aaKnown RBP29.33■■■□□ 2.29
CHKB-209ENST00000481673 RAB3GAP2Q9H2M9 1393 aa29.33■■■□□ 2.29
CHKB-209ENST00000481673 MIA2Q96PC5 1412 aa29.31■■■□□ 2.28
CHKB-209ENST00000481673 TCOF1Q13428 1488 aaKnown RBP29.25■■■□□ 2.27
CHKB-209ENST00000481673 PLB1Q6P1J6 1458 aa29.23■■■□□ 2.27
CHKB-209ENST00000481673 PRG4Q92954 1404 aaPredicted RBP29.22■■■□□ 2.27
CHKB-209ENST00000481673 PTPN23Q9H3S7 1636 aa29.21■■■□□ 2.27
CHKB-209ENST00000481673 CHD1O14646 1710 aa29.19■■■□□ 2.26
CHKB-209ENST00000481673 TROQ12816 1431 aaPredicted RBP29.19■■■□□ 2.26
CHKB-209ENST00000481673 ABCA8O94911 1581 aa29.18■■■□□ 2.26
CHKB-209ENST00000481673 HFM1A2PYH4 1435 aa29.16■■■□□ 2.26
CHKB-209ENST00000481673 PTPRGP23470 1445 aa29.16■■■□□ 2.26
CHKB-209ENST00000481673 ARID3CA6NKF2 412 aa29.15■■■□□ 2.26
CHKB-209ENST00000481673 SHROOM2Q13796 1616 aa29.13■■■□□ 2.25
CHKB-209ENST00000481673 ACIN1Q9UKV3 1341 aaKnown RBP29.09■■■□□ 2.25
CHKB-209ENST00000481673 PTPRKQ15262 1439 aa29.09■■■□□ 2.25
CHKB-209ENST00000481673 PLEKHD1A6NEE1 506 aa29.08■■■□□ 2.25
CHKB-209ENST00000481673 AKNAQ7Z591 1439 aa29.08■■■□□ 2.25
CHKB-209ENST00000481673 ATP10BO94823 1461 aa29.04■■■□□ 2.24
CHKB-209ENST00000481673 ZNF316A6NFI3 1004 aaPredicted RBP29.04■■■□□ 2.24
CHKB-209ENST00000481673 ADCY10Q96PN6 1610 aa29.04■■■□□ 2.24
CHKB-209ENST00000481673 NAIPQ13075 1403 aa29.03■■■□□ 2.24
CHKB-209ENST00000481673 TIMELESSQ9UNS1 1208 aa29■■■□□ 2.23
CHKB-209ENST00000481673 UACAQ9BZF9 1416 aa28.99■■■□□ 2.23
CHKB-209ENST00000481673 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
CHKB-209ENST00000481673 CLASP1Q7Z460 1538 aa28.97■■■□□ 2.23
CHKB-209ENST00000481673 ROCK1Q13464 1354 aa28.95■■■□□ 2.23
CHKB-209ENST00000481673 CFDP1Q9UEE9 299 aaPredicted RBP28.95■■■□□ 2.23
CHKB-209ENST00000481673 ITSN2Q9NZM3 1697 aa28.95■■■□□ 2.22
CHKB-209ENST00000481673 GPATCH8Q9UKJ3 1502 aaKnown RBP28.94■■■□□ 2.22
CHKB-209ENST00000481673 DAPK1P53355 1430 aa28.91■■■□□ 2.22
CHKB-209ENST00000481673 KIF14Q15058 1648 aa28.9■■■□□ 2.22
CHKB-209ENST00000481673 DNMT1P26358 1616 aaKnown RBP28.88■■■□□ 2.21
CHKB-209ENST00000481673 ABCC5O15440 1437 aa28.86■■■□□ 2.21
CHKB-209ENST00000481673 ABCC10Q5T3U5 1492 aa28.85■■■□□ 2.21
CHKB-209ENST00000481673 DIEXFQ68CQ4 756 aaKnown RBP28.85■■■□□ 2.21
CHKB-209ENST00000481673 GCC2Q8IWJ2 1684 aa28.85■■■□□ 2.21
CHKB-209ENST00000481673 CHIC2Q9UKJ5 165 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms