RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 EEA1Q15075 1411 aa33.87■■■■□ 3.01
CTSA-206ENST00000480961 PRXQ9BXM0 1461 aa33.86■■■■□ 3.01
CTSA-206ENST00000480961 JPH4Q96JJ6 628 aa33.84■■■■□ 3.01
CTSA-206ENST00000480961 KIAA0586Q9BVV6 1533 aa33.8■■■■□ 3
CTSA-206ENST00000480961 CYB5RLQ6IPT4 315 aa33.79■■■■□ 3
CTSA-206ENST00000480961 ERCC6L2Q5T890 1561 aa33.73■■■□□ 2.99
CTSA-206ENST00000480961 PRG4Q92954 1404 aaPredicted RBP33.73■■■□□ 2.99
CTSA-206ENST00000480961 ARAP1Q96P48 1450 aa33.72■■■□□ 2.99
CTSA-206ENST00000480961 EHMT2Q96KQ7 1210 aa33.71■■■□□ 2.99
CTSA-206ENST00000480961 SHROOM2Q13796 1616 aa33.69■■■□□ 2.98
CTSA-206ENST00000480961 IQGAP2Q13576 1575 aa33.6■■■□□ 2.97
CTSA-206ENST00000480961 TTBK1Q5TCY1 1321 aaPredicted RBP33.52■■■□□ 2.96
CTSA-206ENST00000480961 KIF21BO75037 1637 aa33.49■■■□□ 2.95
CTSA-206ENST00000480961 UBTFP17480 764 aaKnown RBP33.45■■■□□ 2.95
CTSA-206ENST00000480961 RANGAP1P46060 587 aaPredicted RBP33.45■■■□□ 2.95
CTSA-206ENST00000480961 CARMIL2Q6F5E8 1435 aa33.45■■■□□ 2.94
CTSA-206ENST00000480961 UGGT2Q9NYU1 1516 aa33.43■■■□□ 2.94
CTSA-206ENST00000480961 CTTNBP2Q8WZ74 1663 aa33.42■■■□□ 2.94
CTSA-206ENST00000480961 DISP1Q96F81 1524 aa33.42■■■□□ 2.94
CTSA-206ENST00000480961 GOLGA3Q08378 1498 aa33.39■■■□□ 2.94
CTSA-206ENST00000480961 PTPRGP23470 1445 aa33.36■■■□□ 2.93
CTSA-206ENST00000480961 TNIKQ9UKE5 1360 aa33.35■■■□□ 2.93
CTSA-206ENST00000480961 P3H3Q8IVL6 736 aa33.34■■■□□ 2.93
CTSA-206ENST00000480961 KIAA0556O60303 1618 aa33.28■■■□□ 2.92
CTSA-206ENST00000480961 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
CTSA-206ENST00000480961 NPM1P06748 294 aaKnown RBP eCLIP33.1■■■□□ 2.89
CTSA-206ENST00000480961 UACAQ9BZF9 1416 aa33.1■■■□□ 2.89
CTSA-206ENST00000480961 ADCY10Q96PN6 1610 aa33.1■■■□□ 2.89
CTSA-206ENST00000480961 SAMD9Q5K651 1589 aa33.09■■■□□ 2.89
CTSA-206ENST00000480961 FHOD3Q2V2M9 1422 aa33.08■■■□□ 2.89
CTSA-206ENST00000480961 TRHP20396 242 aaPredicted RBP33.06■■■□□ 2.88
CTSA-206ENST00000480961 PLB1Q6P1J6 1458 aa33.05■■■□□ 2.88
CTSA-206ENST00000480961 UHRF1BP1LA0JNW5 1464 aa32.99■■■□□ 2.87
CTSA-206ENST00000480961 EFCAB5A4FU69 1503 aa32.97■■■□□ 2.87
CTSA-206ENST00000480961 ABCC2Q92887 1545 aa32.97■■■□□ 2.87
CTSA-206ENST00000480961 ARHGAP35Q9NRY4 1499 aa32.96■■■□□ 2.87
CTSA-206ENST00000480961 ARID3CA6NKF2 412 aa32.95■■■□□ 2.87
CTSA-206ENST00000480961 ABCA8O94911 1581 aa32.92■■■□□ 2.86
CTSA-206ENST00000480961 CLIP1P30622 1438 aa32.85■■■□□ 2.85
CTSA-206ENST00000480961 KDM5BQ9UGL1 1544 aa32.84■■■□□ 2.85
CTSA-206ENST00000480961 MAPKBP1O60336 1514 aa32.8■■■□□ 2.84
CTSA-206ENST00000480961 ATP1B4Q9UN42 357 aaPredicted RBP32.79■■■□□ 2.84
CTSA-206ENST00000480961 ASXL2Q76L83 1435 aa32.78■■■□□ 2.84
CTSA-206ENST00000480961 FAM69CQ0P6D2 419 aa32.76■■■□□ 2.83
CTSA-206ENST00000480961 CEP162Q5TB80 1403 aa32.76■■■□□ 2.83
CTSA-206ENST00000480961 ZCCHC11Q5TAX3 1644 aaKnown RBP32.75■■■□□ 2.83
CTSA-206ENST00000480961 RAPGEF6Q8TEU7 1601 aa32.75■■■□□ 2.83
CTSA-206ENST00000480961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.74■■■□□ 2.83
CTSA-206ENST00000480961 HNRNPUL2Q1KMD3 747 aaKnown RBP32.74■■■□□ 2.83
CTSA-206ENST00000480961 FMN1Q68DA7 1419 aa32.74■■■□□ 2.83
CTSA-206ENST00000480961 ATP10BO94823 1461 aa32.74■■■□□ 2.83
CTSA-206ENST00000480961 NUP153P49790 1475 aaKnown RBP32.72■■■□□ 2.83
CTSA-206ENST00000480961 ABCC10Q5T3U5 1492 aa32.69■■■□□ 2.82
CTSA-206ENST00000480961 KCNH8Q96L42 1107 aa32.65■■■□□ 2.82
CTSA-206ENST00000480961 DIP2BQ9P265 1576 aa32.6■■■□□ 2.81
CTSA-206ENST00000480961 WDR7Q9Y4E6 1490 aa32.6■■■□□ 2.81
CTSA-206ENST00000480961 EPRSP07814 1512 aaKnown RBP32.56■■■□□ 2.8
CTSA-206ENST00000480961 CDK13Q14004 1512 aaKnown RBP32.54■■■□□ 2.8
CTSA-206ENST00000480961 CASKIN1Q8WXD9 1431 aa32.53■■■□□ 2.8
CTSA-206ENST00000480961 KIF13AQ9H1H9 1805 aa32.53■■■□□ 2.8
CTSA-206ENST00000480961 PLEKHD1A6NEE1 506 aa32.51■■■□□ 2.79
CTSA-206ENST00000480961 HECW1Q76N89 1606 aa32.5■■■□□ 2.79
CTSA-206ENST00000480961 PCF11O94913 1555 aaKnown RBP32.49■■■□□ 2.79
CTSA-206ENST00000480961 GLI2P10070 1586 aa32.43■■■□□ 2.78
CTSA-206ENST00000480961 FYCO1Q9BQS8 1478 aa32.42■■■□□ 2.78
CTSA-206ENST00000480961 CDK11AQ9UQ88 783 aaPredicted RBP32.38■■■□□ 2.77
CTSA-206ENST00000480961 CD109Q6YHK3 1445 aa32.34■■■□□ 2.77
CTSA-206ENST00000480961 LRRIQ1Q96JM4 1722 aa32.32■■■□□ 2.76
CTSA-206ENST00000480961 TSPOAP1O95153 1857 aa32.31■■■□□ 2.76
CTSA-206ENST00000480961 CCDC18Q5T9S5 1454 aa32.31■■■□□ 2.76
CTSA-206ENST00000480961 VPS8Q8N3P4 1428 aa32.31■■■□□ 2.76
CTSA-206ENST00000480961 MAP3K4Q9Y6R4 1608 aa32.28■■■□□ 2.76
CTSA-206ENST00000480961 TROQ12816 1431 aaPredicted RBP32.25■■■□□ 2.75
CTSA-206ENST00000480961 MAGI3Q5TCQ9 1506 aa32.21■■■□□ 2.75
CTSA-206ENST00000480961 PPRC1Q5VV67 1664 aaKnown RBP32.21■■■□□ 2.75
CTSA-206ENST00000480961 ABCA9Q8IUA7 1624 aa32.19■■■□□ 2.74
CTSA-206ENST00000480961 CFAP43Q8NDM7 1665 aa32.18■■■□□ 2.74
CTSA-206ENST00000480961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.18■■■□□ 2.74
CTSA-206ENST00000480961 TEX14Q8IWB6 1497 aa32.16■■■□□ 2.74
CTSA-206ENST00000480961 KIF14Q15058 1648 aa32.13■■■□□ 2.73
CTSA-206ENST00000480961 TTC37Q6PGP7 1564 aa32.13■■■□□ 2.73
CTSA-206ENST00000480961 MTUS2Q5JR59 1369 aa32.12■■■□□ 2.73
CTSA-206ENST00000480961 COL17A1Q9UMD9 1497 aaPredicted RBP32.07■■■□□ 2.72
CTSA-206ENST00000480961 PLCH2O75038 1416 aa32.03■■■□□ 2.72
CTSA-206ENST00000480961 KANK4Q5T7N3 995 aaPredicted RBP32.03■■■□□ 2.72
CTSA-206ENST00000480961 KDM6BO15054 1643 aa32.03■■■□□ 2.72
CTSA-206ENST00000480961 TIAM1Q13009 1591 aa32.02■■■□□ 2.72
CTSA-206ENST00000480961 APLP2Q06481 763 aa32.01■■■□□ 2.71
CTSA-206ENST00000480961 FANCAO15360 1455 aa31.97■■■□□ 2.71
CTSA-206ENST00000480961 EFCAB2Q5VUJ9 269 aa31.96■■■□□ 2.71
CTSA-206ENST00000480961 NEO1Q92859 1461 aa31.96■■■□□ 2.71
CTSA-206ENST00000480961 EHBP1L1Q8N3D4 1523 aa31.95■■■□□ 2.7
CTSA-206ENST00000480961 AKNAQ7Z591 1439 aa31.94■■■□□ 2.7
CTSA-206ENST00000480961 LRRC9Q6ZRR7 1453 aa31.93■■■□□ 2.7
CTSA-206ENST00000480961 RAPGEF3O95398 923 aa31.93■■■□□ 2.7
CTSA-206ENST00000480961 PHLDB1Q86UU1 1377 aa31.93■■■□□ 2.7
CTSA-206ENST00000480961 CCNB3Q8WWL7 1395 aa31.91■■■□□ 2.7
CTSA-206ENST00000480961 MAP3K1Q13233 1512 aa31.9■■■□□ 2.7
CTSA-206ENST00000480961 ARHGAP5Q13017 1502 aa31.9■■■□□ 2.7
CTSA-206ENST00000480961 ARAP3Q8WWN8 1544 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms