RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
CCM2-213ENST00000480658 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
CCM2-213ENST00000480658 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
CCM2-213ENST00000480658 ERCC6L2Q5T890 1561 aa19.6■□□□□ 0.73
CCM2-213ENST00000480658 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
CCM2-213ENST00000480658 IQGAP2Q13576 1575 aa19.5■□□□□ 0.71
CCM2-213ENST00000480658 RAPGEF2Q9Y4G8 1499 aa19.5■□□□□ 0.71
CCM2-213ENST00000480658 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
CCM2-213ENST00000480658 MAPKBP1O60336 1514 aa19.43■□□□□ 0.7
CCM2-213ENST00000480658 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
CCM2-213ENST00000480658 PTPRGP23470 1445 aa19.38■□□□□ 0.69
CCM2-213ENST00000480658 ADCY10Q96PN6 1610 aa19.37■□□□□ 0.69
CCM2-213ENST00000480658 UGGT2Q9NYU1 1516 aa19.37■□□□□ 0.69
CCM2-213ENST00000480658 CTTNBP2Q8WZ74 1663 aa19.34■□□□□ 0.69
CCM2-213ENST00000480658 EEA1Q15075 1411 aa19.34■□□□□ 0.69
CCM2-213ENST00000480658 GOLGA3Q08378 1498 aa19.33■□□□□ 0.68
CCM2-213ENST00000480658 ABCC10Q5T3U5 1492 aa19.32■□□□□ 0.68
CCM2-213ENST00000480658 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
CCM2-213ENST00000480658 UHRF1BP1LA0JNW5 1464 aa19.31■□□□□ 0.68
CCM2-213ENST00000480658 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
CCM2-213ENST00000480658 DISP1Q96F81 1524 aa19.3■□□□□ 0.68
CCM2-213ENST00000480658 KIAA0556O60303 1618 aa19.29■□□□□ 0.68
CCM2-213ENST00000480658 KIF13AQ9H1H9 1805 aa19.28■□□□□ 0.68
CCM2-213ENST00000480658 DIP2BQ9P265 1576 aa19.27■□□□□ 0.67
CCM2-213ENST00000480658 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
CCM2-213ENST00000480658 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
CCM2-213ENST00000480658 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
CCM2-213ENST00000480658 FAM69CQ0P6D2 419 aa19.21■□□□□ 0.67
CCM2-213ENST00000480658 CSRNP3Q8WYN3 585 aa19.18■□□□□ 0.66
CCM2-213ENST00000480658 KDM5BQ9UGL1 1544 aa19.18■□□□□ 0.66
CCM2-213ENST00000480658 GLI2P10070 1586 aa19.15■□□□□ 0.66
CCM2-213ENST00000480658 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
CCM2-213ENST00000480658 ASXL2Q76L83 1435 aa19.15■□□□□ 0.66
CCM2-213ENST00000480658 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
CCM2-213ENST00000480658 ABCA8O94911 1581 aa19.08■□□□□ 0.65
CCM2-213ENST00000480658 KDM6BO15054 1643 aa19.07■□□□□ 0.64
CCM2-213ENST00000480658 KIF21BO75037 1637 aa19.07■□□□□ 0.64
CCM2-213ENST00000480658 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
CCM2-213ENST00000480658 TEX14Q8IWB6 1497 aa19.06■□□□□ 0.64
CCM2-213ENST00000480658 WDR7Q9Y4E6 1490 aa19.05■□□□□ 0.64
CCM2-213ENST00000480658 EPRSP07814 1512 aaKnown RBP19.05■□□□□ 0.64
CCM2-213ENST00000480658 MAP3K4Q9Y6R4 1608 aa19.02■□□□□ 0.64
CCM2-213ENST00000480658 EFCAB5A4FU69 1503 aa19.01■□□□□ 0.63
CCM2-213ENST00000480658 TSPOAP1O95153 1857 aa18.99■□□□□ 0.63
CCM2-213ENST00000480658 CFAP43Q8NDM7 1665 aa18.96■□□□□ 0.63
CCM2-213ENST00000480658 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
CCM2-213ENST00000480658 RAPGEF6Q8TEU7 1601 aa18.94■□□□□ 0.62
CCM2-213ENST00000480658 PPRC1Q5VV67 1664 aaKnown RBP18.94■□□□□ 0.62
CCM2-213ENST00000480658 MAGI3Q5TCQ9 1506 aa18.91■□□□□ 0.62
CCM2-213ENST00000480658 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
CCM2-213ENST00000480658 CD109Q6YHK3 1445 aa18.88■□□□□ 0.61
CCM2-213ENST00000480658 ATP10BO94823 1461 aa18.87■□□□□ 0.61
CCM2-213ENST00000480658 P3H3Q8IVL6 736 aa18.87■□□□□ 0.61
CCM2-213ENST00000480658 FHOD3Q2V2M9 1422 aa18.84■□□□□ 0.61
CCM2-213ENST00000480658 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
CCM2-213ENST00000480658 FMN1Q68DA7 1419 aa18.83■□□□□ 0.61
CCM2-213ENST00000480658 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.6
CCM2-213ENST00000480658 NUP153P49790 1475 aaKnown RBP18.83■□□□□ 0.6
CCM2-213ENST00000480658 ABCA9Q8IUA7 1624 aa18.82■□□□□ 0.6
CCM2-213ENST00000480658 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
CCM2-213ENST00000480658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
CCM2-213ENST00000480658 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
CCM2-213ENST00000480658 RANGAP1P46060 587 aaPredicted RBP18.77■□□□□ 0.6
CCM2-213ENST00000480658 HECW1Q76N89 1606 aa18.76■□□□□ 0.59
CCM2-213ENST00000480658 ARAP3Q8WWN8 1544 aa18.75■□□□□ 0.59
CCM2-213ENST00000480658 PLEKHD1A6NEE1 506 aa18.75■□□□□ 0.59
CCM2-213ENST00000480658 NEO1Q92859 1461 aa18.75■□□□□ 0.59
CCM2-213ENST00000480658 CFAP74Q9C0B2 1584 aa18.73■□□□□ 0.59
CCM2-213ENST00000480658 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
CCM2-213ENST00000480658 COL17A1Q9UMD9 1497 aaPredicted RBP18.71■□□□□ 0.59
CCM2-213ENST00000480658 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
CCM2-213ENST00000480658 CDK11AQ9UQ88 783 aaPredicted RBP18.7■□□□□ 0.58
CCM2-213ENST00000480658 CLIP1P30622 1438 aa18.63■□□□□ 0.57
CCM2-213ENST00000480658 ADGRL1O94910 1474 aa18.63■□□□□ 0.57
CCM2-213ENST00000480658 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
CCM2-213ENST00000480658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.62■□□□□ 0.57
CCM2-213ENST00000480658 CDK13Q14004 1512 aaKnown RBP18.61■□□□□ 0.57
CCM2-213ENST00000480658 KIF14Q15058 1648 aa18.6■□□□□ 0.57
CCM2-213ENST00000480658 FANCAO15360 1455 aa18.6■□□□□ 0.57
CCM2-213ENST00000480658 KDM4FA0A1W2PPD8 638 aa18.6■□□□□ 0.57
CCM2-213ENST00000480658 EHMT2Q96KQ7 1210 aa18.59■□□□□ 0.57
CCM2-213ENST00000480658 TTC37Q6PGP7 1564 aa18.58■□□□□ 0.56
CCM2-213ENST00000480658 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
CCM2-213ENST00000480658 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
CCM2-213ENST00000480658 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
CCM2-213ENST00000480658 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
CCM2-213ENST00000480658 AKNAQ7Z591 1439 aa18.56■□□□□ 0.56
CCM2-213ENST00000480658 TROQ12816 1431 aaPredicted RBP18.55■□□□□ 0.56
CCM2-213ENST00000480658 PLCH2O75038 1416 aa18.54■□□□□ 0.56
CCM2-213ENST00000480658 MYO5CQ9NQX4 1742 aa18.54■□□□□ 0.56
CCM2-213ENST00000480658 MAGI2Q86UL8 1455 aa18.53■□□□□ 0.56
CCM2-213ENST00000480658 PCF11O94913 1555 aaKnown RBP18.52■□□□□ 0.56
CCM2-213ENST00000480658 ZMYM4Q5VZL5 1548 aa18.52■□□□□ 0.56
CCM2-213ENST00000480658 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.56
CCM2-213ENST00000480658 FRMPD1Q5SYB0 1578 aa18.51■□□□□ 0.55
CCM2-213ENST00000480658 RICTORQ6R327 1708 aa18.5■□□□□ 0.55
CCM2-213ENST00000480658 RAPGEF3O95398 923 aa18.48■□□□□ 0.55
CCM2-213ENST00000480658 EFCAB2Q5VUJ9 269 aa18.48■□□□□ 0.55
CCM2-213ENST00000480658 POGZQ7Z3K3 1410 aa18.46■□□□□ 0.55
CCM2-213ENST00000480658 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms