RNA–Protein interactions for RNA: ENST00000479680.1

ATXN1-205, Transcript of ataxin 1, humanhuman

TSL 4

Gene ATXN1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-205ENST00000479680 KIF21BO75037 1637 aa11.32□□□□□ -0.6
ATXN1-205ENST00000479680 CEP162Q5TB80 1403 aa11.31□□□□□ -0.6
ATXN1-205ENST00000479680 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
ATXN1-205ENST00000479680 OSCARQ8IYS5 282 aa11.3□□□□□ -0.6
ATXN1-205ENST00000479680 BIVM-ERCC5R4GMW8 1640 aa11.3□□□□□ -0.6
ATXN1-205ENST00000479680 CEP164Q9UPV0 1460 aa11.3□□□□□ -0.6
ATXN1-205ENST00000479680 TOP2BQ02880 1626 aa11.29□□□□□ -0.6
ATXN1-205ENST00000479680 UBTFP17480 764 aaKnown RBP11.28□□□□□ -0.6
ATXN1-205ENST00000479680 RUSC2Q8N2Y8 1516 aa11.27□□□□□ -0.61
ATXN1-205ENST00000479680 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
ATXN1-205ENST00000479680 PPARGC1BQ86YN6 1023 aaKnown RBP11.23□□□□□ -0.61
ATXN1-205ENST00000479680 SSUH2Q9Y2M2 353 aa11.21□□□□□ -0.61
ATXN1-205ENST00000479680 CFTRP13569 1480 aa11.19□□□□□ -0.62
ATXN1-205ENST00000479680 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
ATXN1-205ENST00000479680 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
ATXN1-205ENST00000479680 ERICH3Q5RHP9 1530 aa11.17□□□□□ -0.62
ATXN1-205ENST00000479680 CLIP1P30622 1438 aa11.16□□□□□ -0.62
ATXN1-205ENST00000479680 CUX1P39880 1505 aa11.14□□□□□ -0.63
ATXN1-205ENST00000479680 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
ATXN1-205ENST00000479680 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
ATXN1-205ENST00000479680 CC2D2AQ9P2K1 1620 aa11.11□□□□□ -0.63
ATXN1-205ENST00000479680 VPS8Q8N3P4 1428 aa11.1□□□□□ -0.63
ATXN1-205ENST00000479680 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
ATXN1-205ENST00000479680 PRXQ9BXM0 1461 aa11.08□□□□□ -0.64
ATXN1-205ENST00000479680 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
ATXN1-205ENST00000479680 SPDYE1Q8NFV5 336 aaPredicted RBP11.08□□□□□ -0.64
ATXN1-205ENST00000479680 CCER1Q8TC90 406 aaPredicted RBP11.08□□□□□ -0.64
ATXN1-205ENST00000479680 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
ATXN1-205ENST00000479680 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
ATXN1-205ENST00000479680 FXR2P51116 673 aaKnown RBP eCLIP11□□□□□ -0.65
ATXN1-205ENST00000479680 CUX2O14529 1486 aa11□□□□□ -0.65
ATXN1-205ENST00000479680 FGD5Q6ZNL6 1462 aa10.98□□□□□ -0.65
ATXN1-205ENST00000479680 FANCD2Q9BXW9 1451 aa10.98□□□□□ -0.65
ATXN1-205ENST00000479680 DNMBPQ6XZF7 1577 aa10.98□□□□□ -0.65
ATXN1-205ENST00000479680 ARAP1Q96P48 1450 aa10.96□□□□□ -0.65
ATXN1-205ENST00000479680 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
ATXN1-205ENST00000479680 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
ATXN1-205ENST00000479680 IGF1RP08069 1367 aa10.91□□□□□ -0.66
ATXN1-205ENST00000479680 CARMIL1Q5VZK9 1371 aa10.91□□□□□ -0.66
ATXN1-205ENST00000479680 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
ATXN1-205ENST00000479680 STAG3Q9UJ98 1225 aa10.91□□□□□ -0.66
ATXN1-205ENST00000479680 CUL7Q14999 1698 aa10.91□□□□□ -0.66
ATXN1-205ENST00000479680 TOPBP1Q92547 1522 aa10.9□□□□□ -0.66
ATXN1-205ENST00000479680 ABCA10Q8WWZ4 1543 aa10.89□□□□□ -0.67
ATXN1-205ENST00000479680 ARHGAP35Q9NRY4 1499 aa10.89□□□□□ -0.67
ATXN1-205ENST00000479680 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
ATXN1-205ENST00000479680 CTTNBP2Q8WZ74 1663 aa10.87□□□□□ -0.67
ATXN1-205ENST00000479680 MAP3K1Q13233 1512 aa10.87□□□□□ -0.67
ATXN1-205ENST00000479680 WDR97A6NE52 1622 aa10.86□□□□□ -0.67
ATXN1-205ENST00000479680 POLA1P09884 1462 aaPredicted RBP10.85□□□□□ -0.67
ATXN1-205ENST00000479680 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
ATXN1-205ENST00000479680 PROM2Q8N271 834 aa10.84□□□□□ -0.67
ATXN1-205ENST00000479680 NESP48681 1621 aa10.84□□□□□ -0.67
ATXN1-205ENST00000479680 PDS5BQ9NTI5 1447 aa10.84□□□□□ -0.67
ATXN1-205ENST00000479680 EFCAB5A4FU69 1503 aa10.83□□□□□ -0.68
ATXN1-205ENST00000479680 RRBP1Q9P2E9 1410 aaKnown RBP10.83□□□□□ -0.68
ATXN1-205ENST00000479680 TIAM1Q13009 1591 aa10.82□□□□□ -0.68
ATXN1-205ENST00000479680 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
ATXN1-205ENST00000479680 CLSPNQ9HAW4 1339 aa10.82□□□□□ -0.68
ATXN1-205ENST00000479680 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
ATXN1-205ENST00000479680 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
ATXN1-205ENST00000479680 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
ATXN1-205ENST00000479680 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
ATXN1-205ENST00000479680 ABCA5Q8WWZ7 1642 aa10.78□□□□□ -0.68
ATXN1-205ENST00000479680 ZNF316A6NFI3 1004 aaPredicted RBP10.78□□□□□ -0.68
ATXN1-205ENST00000479680 PRR29P0C7W0 189 aa10.78□□□□□ -0.68
ATXN1-205ENST00000479680 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
ATXN1-205ENST00000479680 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.68
ATXN1-205ENST00000479680 DIEXFQ68CQ4 756 aaKnown RBP10.77□□□□□ -0.69
ATXN1-205ENST00000479680 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.69
ATXN1-205ENST00000479680 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
ATXN1-205ENST00000479680 PCF11O94913 1555 aaKnown RBP10.75□□□□□ -0.69
ATXN1-205ENST00000479680 GAPVD1Q14C86 1478 aa10.74□□□□□ -0.69
ATXN1-205ENST00000479680 LRRC9Q6ZRR7 1453 aa10.74□□□□□ -0.69
ATXN1-205ENST00000479680 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
ATXN1-205ENST00000479680 FMN1Q68DA7 1419 aa10.72□□□□□ -0.69
ATXN1-205ENST00000479680 CASKIN1Q8WXD9 1431 aa10.72□□□□□ -0.69
ATXN1-205ENST00000479680 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
ATXN1-205ENST00000479680 DHX57Q6P158 1386 aaKnown RBP10.71□□□□□ -0.69
ATXN1-205ENST00000479680 TARBP1Q13395 1621 aaKnown RBP10.69□□□□□ -0.7
ATXN1-205ENST00000479680 FHOD3Q2V2M9 1422 aa10.69□□□□□ -0.7
ATXN1-205ENST00000479680 SAMD9Q5K651 1589 aa10.69□□□□□ -0.7
ATXN1-205ENST00000479680 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
ATXN1-205ENST00000479680 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
ATXN1-205ENST00000479680 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
ATXN1-205ENST00000479680 CLCN6P51797 869 aa10.67□□□□□ -0.7
ATXN1-205ENST00000479680 P3H3Q8IVL6 736 aa10.67□□□□□ -0.7
ATXN1-205ENST00000479680 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
ATXN1-205ENST00000479680 ATP1B4Q9UN42 357 aaPredicted RBP10.67□□□□□ -0.7
ATXN1-205ENST00000479680 TDRD9Q8NDG6 1382 aaKnown RBP10.66□□□□□ -0.7
ATXN1-205ENST00000479680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.65□□□□□ -0.73e-8■■□□□ 14
ATXN1-205ENST00000479680 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.7
ATXN1-205ENST00000479680 C19orf67A6NJJ6 358 aa10.63□□□□□ -0.71
ATXN1-205ENST00000479680 ITGAEP38570 1179 aa10.63□□□□□ -0.71
ATXN1-205ENST00000479680 ADAMTS12P58397 1594 aa10.63□□□□□ -0.71
ATXN1-205ENST00000479680 SUPT6HQ7KZ85 1726 aaKnown RBP10.63□□□□□ -0.71
ATXN1-205ENST00000479680 SNAPC4Q5SXM2 1469 aa10.62□□□□□ -0.71
ATXN1-205ENST00000479680 FAM50AQ14320 339 aaKnown RBP10.62□□□□□ -0.71
ATXN1-205ENST00000479680 PHLDB1Q86UU1 1377 aa10.62□□□□□ -0.71
ATXN1-205ENST00000479680 RAB3GAP2Q9H2M9 1393 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms