RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 JPH4Q96JJ6 628 aa28.9■■■□□ 2.22
DDX56-210ENST00000479440 ABCC10Q5T3U5 1492 aa28.87■■■□□ 2.21
DDX56-210ENST00000479440 MAPKBP1O60336 1514 aa28.87■■■□□ 2.21
DDX56-210ENST00000479440 NPM1P06748 294 aaKnown RBP eCLIP28.82■■■□□ 2.2
DDX56-210ENST00000479440 DIP2BQ9P265 1576 aa28.81■■■□□ 2.2
DDX56-210ENST00000479440 FAM69CQ0P6D2 419 aa28.8■■■□□ 2.2
DDX56-210ENST00000479440 ADCY10Q96PN6 1610 aa28.77■■■□□ 2.2
DDX56-210ENST00000479440 KIAA0586Q9BVV6 1533 aa28.69■■■□□ 2.18
DDX56-210ENST00000479440 KDM6BO15054 1643 aa28.69■■■□□ 2.18
DDX56-210ENST00000479440 CUL7Q14999 1698 aa28.66■■■□□ 2.18
DDX56-210ENST00000479440 KIF27Q86VH2 1401 aa28.59■■■□□ 2.17
DDX56-210ENST00000479440 IGF1RP08069 1367 aa28.54■■■□□ 2.16
DDX56-210ENST00000479440 TSPOAP1O95153 1857 aa28.53■■■□□ 2.16
DDX56-210ENST00000479440 PTPRGP23470 1445 aa28.49■■■□□ 2.15
DDX56-210ENST00000479440 KDM4FA0A1W2PPD8 638 aa28.48■■■□□ 2.15
DDX56-210ENST00000479440 CARMIL2Q6F5E8 1435 aa28.45■■■□□ 2.15
DDX56-210ENST00000479440 ABCC2Q92887 1545 aa28.45■■■□□ 2.15
DDX56-210ENST00000479440 TNIKQ9UKE5 1360 aa28.43■■■□□ 2.14
DDX56-210ENST00000479440 PLB1Q6P1J6 1458 aa28.4■■■□□ 2.14
DDX56-210ENST00000479440 GLI2P10070 1586 aa28.39■■■□□ 2.14
DDX56-210ENST00000479440 IQGAP2Q13576 1575 aa28.39■■■□□ 2.14
DDX56-210ENST00000479440 CARMIL1Q5VZK9 1371 aa28.38■■■□□ 2.13
DDX56-210ENST00000479440 ASXL2Q76L83 1435 aa28.38■■■□□ 2.13
DDX56-210ENST00000479440 TTBK1Q5TCY1 1321 aaPredicted RBP28.36■■■□□ 2.13
DDX56-210ENST00000479440 UHRF1BP1LA0JNW5 1464 aa28.34■■■□□ 2.13
DDX56-210ENST00000479440 PPRC1Q5VV67 1664 aaKnown RBP28.33■■■□□ 2.13
DDX56-210ENST00000479440 UACAQ9BZF9 1416 aa28.29■■■□□ 2.12
DDX56-210ENST00000479440 ADGRL1O94910 1474 aa28.26■■■□□ 2.11
DDX56-210ENST00000479440 DISP1Q96F81 1524 aa28.23■■■□□ 2.11
DDX56-210ENST00000479440 MAP3K4Q9Y6R4 1608 aa28.21■■■□□ 2.11
DDX56-210ENST00000479440 TEX14Q8IWB6 1497 aa28.21■■■□□ 2.11
DDX56-210ENST00000479440 EPRSP07814 1512 aaKnown RBP28.21■■■□□ 2.11
DDX56-210ENST00000479440 KDM5BQ9UGL1 1544 aa28.21■■■□□ 2.11
DDX56-210ENST00000479440 UGGT2Q9NYU1 1516 aa28.17■■■□□ 2.1
DDX56-210ENST00000479440 ZCCHC11Q5TAX3 1644 aaKnown RBP28.16■■■□□ 2.1
DDX56-210ENST00000479440 KIAA0556O60303 1618 aa28.14■■■□□ 2.09
DDX56-210ENST00000479440 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
DDX56-210ENST00000479440 RAPGEF2Q9Y4G8 1499 aa28.12■■■□□ 2.09
DDX56-210ENST00000479440 ILDR1Q86SU0 546 aaPredicted RBP28.11■■■□□ 2.09
DDX56-210ENST00000479440 WDR7Q9Y4E6 1490 aa28.07■■■□□ 2.08
DDX56-210ENST00000479440 HECW2Q9P2P5 1572 aa28.03■■■□□ 2.08
DDX56-210ENST00000479440 CFAP43Q8NDM7 1665 aa27.95■■■□□ 2.07
DDX56-210ENST00000479440 CTTNBP2Q8WZ74 1663 aa27.94■■■□□ 2.06
DDX56-210ENST00000479440 MAGI3Q5TCQ9 1506 aa27.93■■■□□ 2.06
DDX56-210ENST00000479440 GOLGA3Q08378 1498 aa27.93■■■□□ 2.06
DDX56-210ENST00000479440 CD109Q6YHK3 1445 aa27.9■■■□□ 2.06
DDX56-210ENST00000479440 ABCA8O94911 1581 aa27.88■■■□□ 2.05
DDX56-210ENST00000479440 KCNH8Q96L42 1107 aa27.77■■■□□ 2.04
DDX56-210ENST00000479440 KIF21BO75037 1637 aa27.77■■■□□ 2.04
DDX56-210ENST00000479440 ARAP3Q8WWN8 1544 aa27.71■■■□□ 2.03
DDX56-210ENST00000479440 PRXQ9BXM0 1461 aa27.68■■■□□ 2.02
DDX56-210ENST00000479440 FAM9AQ8IZU1 332 aaPredicted RBP27.67■■■□□ 2.02
DDX56-210ENST00000479440 PHLDB1Q86UU1 1377 aa27.63■■■□□ 2.01
DDX56-210ENST00000479440 ABCA9Q8IUA7 1624 aa27.63■■■□□ 2.01
DDX56-210ENST00000479440 ATP10BO94823 1461 aa27.59■■■□□ 2.01
DDX56-210ENST00000479440 PTPRMP28827 1452 aa27.56■■■□□ 2
DDX56-210ENST00000479440 ADAMTSL3P82987 1691 aa27.56■■■□□ 2
DDX56-210ENST00000479440 ARID3CA6NKF2 412 aa27.55■■■□□ 2
DDX56-210ENST00000479440 NEO1Q92859 1461 aa27.55■■■□□ 2
DDX56-210ENST00000479440 FBXO41Q8TF61 875 aa27.51■■□□□ 1.99
DDX56-210ENST00000479440 SAMD9Q5K651 1589 aa27.51■■□□□ 1.99
DDX56-210ENST00000479440 RAPGEF6Q8TEU7 1601 aa27.5■■□□□ 1.99
DDX56-210ENST00000479440 P3H3Q8IVL6 736 aa27.48■■□□□ 1.99
DDX56-210ENST00000479440 FRMPD1Q5SYB0 1578 aa27.48■■□□□ 1.99
DDX56-210ENST00000479440 BCORL1Q5H9F3 1711 aa27.47■■□□□ 1.99
DDX56-210ENST00000479440 RAPGEF3O95398 923 aa27.44■■□□□ 1.98
DDX56-210ENST00000479440 PCF11O94913 1555 aaKnown RBP27.43■■□□□ 1.98
DDX56-210ENST00000479440 MADDQ8WXG6 1647 aa27.43■■□□□ 1.98
DDX56-210ENST00000479440 ARHGEF40Q8TER5 1519 aa27.41■■□□□ 1.98
DDX56-210ENST00000479440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.39■■□□□ 1.98
DDX56-210ENST00000479440 HNRNPUL2Q1KMD3 747 aaKnown RBP27.39■■□□□ 1.98
DDX56-210ENST00000479440 ARID4BQ4LE39 1312 aaPredicted RBP27.39■■□□□ 1.97
DDX56-210ENST00000479440 NUP153P49790 1475 aaKnown RBP27.37■■□□□ 1.97
DDX56-210ENST00000479440 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
DDX56-210ENST00000479440 LMTK3Q96Q04 1460 aa27.36■■□□□ 1.97
DDX56-210ENST00000479440 DENND4BO75064 1496 aaPredicted RBP27.33■■□□□ 1.97
DDX56-210ENST00000479440 RIMS1Q86UR5 1692 aaKnown RBP27.32■■□□□ 1.96
DDX56-210ENST00000479440 RICTORQ6R327 1708 aa27.3■■□□□ 1.96
DDX56-210ENST00000479440 CSRNP3Q8WYN3 585 aa27.28■■□□□ 1.96
DDX56-210ENST00000479440 FANCAO15360 1455 aa27.27■■□□□ 1.96
DDX56-210ENST00000479440 FHOD3Q2V2M9 1422 aa27.27■■□□□ 1.96
DDX56-210ENST00000479440 POGZQ7Z3K3 1410 aa27.26■■□□□ 1.95
DDX56-210ENST00000479440 AKNAQ7Z591 1439 aa27.26■■□□□ 1.95
DDX56-210ENST00000479440 ZMYM4Q5VZL5 1548 aa27.26■■□□□ 1.95
DDX56-210ENST00000479440 EFCAB5A4FU69 1503 aa27.24■■□□□ 1.95
DDX56-210ENST00000479440 PLEKHD1A6NEE1 506 aa27.23■■□□□ 1.95
DDX56-210ENST00000479440 ZFYVE16Q7Z3T8 1539 aa27.22■■□□□ 1.95
DDX56-210ENST00000479440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.22■■□□□ 1.95
DDX56-210ENST00000479440 EEA1Q15075 1411 aa27.21■■□□□ 1.95
DDX56-210ENST00000479440 TTC37Q6PGP7 1564 aa27.19■■□□□ 1.94
DDX56-210ENST00000479440 MAGI2Q86UL8 1455 aa27.18■■□□□ 1.94
DDX56-210ENST00000479440 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
DDX56-210ENST00000479440 YEATS2Q9ULM3 1422 aa27.13■■□□□ 1.93
DDX56-210ENST00000479440 SIGLEC1Q9BZZ2 1709 aa27.1■■□□□ 1.93
DDX56-210ENST00000479440 FER1L4A9Z1Z3 1794 aa27.1■■□□□ 1.93
DDX56-210ENST00000479440 HECW1Q76N89 1606 aa27.1■■□□□ 1.93
DDX56-210ENST00000479440 HSPA2P54652 639 aa27.09■■□□□ 1.93
DDX56-210ENST00000479440 PLPPR3Q6T4P5 718 aa27.08■■□□□ 1.93
DDX56-210ENST00000479440 CDK13Q14004 1512 aaKnown RBP27.06■■□□□ 1.92
DDX56-210ENST00000479440 PLCH2O75038 1416 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms