RNA–Protein interactions for RNA: ENST00000478843.5

PRKCD-205, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-205ENST00000478843 MAPKBP1O60336 1514 aa17.28■□□□□ 0.36
PRKCD-205ENST00000478843 ADCY10Q96PN6 1610 aa17.28■□□□□ 0.36
PRKCD-205ENST00000478843 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
PRKCD-205ENST00000478843 ABCC10Q5T3U5 1492 aa17.25■□□□□ 0.35
PRKCD-205ENST00000478843 JPH4Q96JJ6 628 aa17.2■□□□□ 0.34
PRKCD-205ENST00000478843 CUL7Q14999 1698 aa17.19■□□□□ 0.34
PRKCD-205ENST00000478843 KDM6BO15054 1643 aa17.16■□□□□ 0.34
PRKCD-205ENST00000478843 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
PRKCD-205ENST00000478843 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
PRKCD-205ENST00000478843 FAM69CQ0P6D2 419 aa17.12■□□□□ 0.33
PRKCD-205ENST00000478843 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
PRKCD-205ENST00000478843 IGF1RP08069 1367 aa17.06■□□□□ 0.32
PRKCD-205ENST00000478843 NPM1P06748 294 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRKCD-205ENST00000478843 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
PRKCD-205ENST00000478843 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
PRKCD-205ENST00000478843 IQGAP2Q13576 1575 aa17.01■□□□□ 0.31
PRKCD-205ENST00000478843 GLI2P10070 1586 aa17■□□□□ 0.31
PRKCD-205ENST00000478843 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
PRKCD-205ENST00000478843 PTPRGP23470 1445 aa16.97■□□□□ 0.31
PRKCD-205ENST00000478843 UHRF1BP1LA0JNW5 1464 aa16.95■□□□□ 0.3
PRKCD-205ENST00000478843 TNIKQ9UKE5 1360 aa16.95■□□□□ 0.3
PRKCD-205ENST00000478843 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
PRKCD-205ENST00000478843 MAP3K4Q9Y6R4 1608 aa16.94■□□□□ 0.3
PRKCD-205ENST00000478843 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
PRKCD-205ENST00000478843 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
PRKCD-205ENST00000478843 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
PRKCD-205ENST00000478843 DISP1Q96F81 1524 aa16.93■□□□□ 0.3
PRKCD-205ENST00000478843 ZCCHC11Q5TAX3 1644 aaKnown RBP16.9■□□□□ 0.3
PRKCD-205ENST00000478843 KDM5BQ9UGL1 1544 aa16.89■□□□□ 0.29
PRKCD-205ENST00000478843 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
PRKCD-205ENST00000478843 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
PRKCD-205ENST00000478843 UGGT2Q9NYU1 1516 aa16.88■□□□□ 0.29
PRKCD-205ENST00000478843 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
PRKCD-205ENST00000478843 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
PRKCD-205ENST00000478843 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
PRKCD-205ENST00000478843 COL17A1Q9UMD9 1497 aaPredicted RBP16.85■□□□□ 0.29
PRKCD-205ENST00000478843 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
PRKCD-205ENST00000478843 TEX14Q8IWB6 1497 aa16.81■□□□□ 0.28
PRKCD-205ENST00000478843 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
PRKCD-205ENST00000478843 HECW2Q9P2P5 1572 aa16.77■□□□□ 0.28
PRKCD-205ENST00000478843 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
PRKCD-205ENST00000478843 CFAP43Q8NDM7 1665 aa16.76■□□□□ 0.27
PRKCD-205ENST00000478843 ABCA8O94911 1581 aa16.73■□□□□ 0.27
PRKCD-205ENST00000478843 ILDR1Q86SU0 546 aaPredicted RBP16.71■□□□□ 0.27
PRKCD-205ENST00000478843 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
PRKCD-205ENST00000478843 KIF21BO75037 1637 aa16.67■□□□□ 0.26
PRKCD-205ENST00000478843 GOLGA3Q08378 1498 aa16.66■□□□□ 0.26
PRKCD-205ENST00000478843 CD109Q6YHK3 1445 aa16.63■□□□□ 0.25
PRKCD-205ENST00000478843 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
PRKCD-205ENST00000478843 ABCA9Q8IUA7 1624 aa16.57■□□□□ 0.24
PRKCD-205ENST00000478843 ARAP3Q8WWN8 1544 aa16.57■□□□□ 0.24
PRKCD-205ENST00000478843 ADAMTSL3P82987 1691 aa16.54■□□□□ 0.24
PRKCD-205ENST00000478843 SAMD9Q5K651 1589 aa16.54■□□□□ 0.24
PRKCD-205ENST00000478843 FRMPD1Q5SYB0 1578 aa16.52■□□□□ 0.24
PRKCD-205ENST00000478843 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
PRKCD-205ENST00000478843 ATP10BO94823 1461 aa16.5■□□□□ 0.23
PRKCD-205ENST00000478843 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
PRKCD-205ENST00000478843 BCORL1Q5H9F3 1711 aa16.48■□□□□ 0.23
PRKCD-205ENST00000478843 PTPRMP28827 1452 aa16.46■□□□□ 0.23
PRKCD-205ENST00000478843 MADDQ8WXG6 1647 aa16.45■□□□□ 0.22
PRKCD-205ENST00000478843 NEO1Q92859 1461 aa16.45■□□□□ 0.22
PRKCD-205ENST00000478843 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
PRKCD-205ENST00000478843 PHLDB1Q86UU1 1377 aa16.43■□□□□ 0.22
PRKCD-205ENST00000478843 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
PRKCD-205ENST00000478843 ARID3CA6NKF2 412 aa16.41■□□□□ 0.22
PRKCD-205ENST00000478843 NUP153P49790 1475 aaKnown RBP16.41■□□□□ 0.22
PRKCD-205ENST00000478843 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
PRKCD-205ENST00000478843 RIMS1Q86UR5 1692 aaKnown RBP16.38■□□□□ 0.21
PRKCD-205ENST00000478843 LMTK3Q96Q04 1460 aa16.37■□□□□ 0.21
PRKCD-205ENST00000478843 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
PRKCD-205ENST00000478843 CFAP74Q9C0B2 1584 aa16.37■□□□□ 0.21
PRKCD-205ENST00000478843 SIGLEC1Q9BZZ2 1709 aa16.36■□□□□ 0.21
PRKCD-205ENST00000478843 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
PRKCD-205ENST00000478843 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
PRKCD-205ENST00000478843 TTC37Q6PGP7 1564 aa16.34■□□□□ 0.21
PRKCD-205ENST00000478843 FBXO41Q8TF61 875 aa16.33■□□□□ 0.2
PRKCD-205ENST00000478843 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
PRKCD-205ENST00000478843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRKCD-205ENST00000478843 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
PRKCD-205ENST00000478843 FAM9AQ8IZU1 332 aaPredicted RBP16.29■□□□□ 0.2
PRKCD-205ENST00000478843 FANCAO15360 1455 aa16.29■□□□□ 0.2
PRKCD-205ENST00000478843 EFCAB5A4FU69 1503 aa16.28■□□□□ 0.2
PRKCD-205ENST00000478843 ZFYVE16Q7Z3T8 1539 aa16.28■□□□□ 0.2
PRKCD-205ENST00000478843 FER1L4A9Z1Z3 1794 aa16.28■□□□□ 0.2
PRKCD-205ENST00000478843 AKNAQ7Z591 1439 aa16.27■□□□□ 0.19
PRKCD-205ENST00000478843 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
PRKCD-205ENST00000478843 HECW1Q76N89 1606 aa16.24■□□□□ 0.19
PRKCD-205ENST00000478843 EEA1Q15075 1411 aa16.24■□□□□ 0.19
PRKCD-205ENST00000478843 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
PRKCD-205ENST00000478843 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
PRKCD-205ENST00000478843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
PRKCD-205ENST00000478843 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
PRKCD-205ENST00000478843 CDK13Q14004 1512 aaKnown RBP16.23■□□□□ 0.19
PRKCD-205ENST00000478843 MAGI2Q86UL8 1455 aa16.21■□□□□ 0.19
PRKCD-205ENST00000478843 POGZQ7Z3K3 1410 aa16.2■□□□□ 0.18
PRKCD-205ENST00000478843 MYO5CQ9NQX4 1742 aa16.2■□□□□ 0.18
PRKCD-205ENST00000478843 PREX1Q8TCU6 1659 aa16.18■□□□□ 0.18
PRKCD-205ENST00000478843 ARHGEF12Q9NZN5 1544 aa16.18■□□□□ 0.18
PRKCD-205ENST00000478843 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
PRKCD-205ENST00000478843 KIF14Q15058 1648 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms