RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
LINC00336-201ENST00000477984 EFCAB5A4FU69 1503 aa25.86■■□□□ 1.73
LINC00336-201ENST00000477984 CTTNBP2Q8WZ74 1663 aa25.86■■□□□ 1.73
LINC00336-201ENST00000477984 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
LINC00336-201ENST00000477984 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
LINC00336-201ENST00000477984 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
LINC00336-201ENST00000477984 TIAM1Q13009 1591 aa25.8■■□□□ 1.72
LINC00336-201ENST00000477984 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
LINC00336-201ENST00000477984 DIEXFQ68CQ4 756 aaKnown RBP25.75■■□□□ 1.71
LINC00336-201ENST00000477984 WDR62O43379 1518 aa25.74■■□□□ 1.71
LINC00336-201ENST00000477984 FHOD3Q2V2M9 1422 aa25.72■■□□□ 1.71
LINC00336-201ENST00000477984 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
LINC00336-201ENST00000477984 PCF11O94913 1555 aaKnown RBP25.72■■□□□ 1.71
LINC00336-201ENST00000477984 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
LINC00336-201ENST00000477984 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
LINC00336-201ENST00000477984 FYCO1Q9BQS8 1478 aa25.69■■□□□ 1.7
LINC00336-201ENST00000477984 CFAP43Q8NDM7 1665 aa25.69■■□□□ 1.7
LINC00336-201ENST00000477984 LRRC9Q6ZRR7 1453 aa25.68■■□□□ 1.7
LINC00336-201ENST00000477984 P3H3Q8IVL6 736 aa25.67■■□□□ 1.7
LINC00336-201ENST00000477984 CASKIN1Q8WXD9 1431 aa25.67■■□□□ 1.7
LINC00336-201ENST00000477984 SAMD9Q5K651 1589 aa25.67■■□□□ 1.7
LINC00336-201ENST00000477984 CENPBP07199 599 aaPredicted RBP25.66■■□□□ 1.7
LINC00336-201ENST00000477984 CCNB3Q8WWL7 1395 aa25.64■■□□□ 1.7
LINC00336-201ENST00000477984 FMN1Q68DA7 1419 aa25.64■■□□□ 1.7
LINC00336-201ENST00000477984 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
LINC00336-201ENST00000477984 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
LINC00336-201ENST00000477984 NEUROD1Q13562 356 aa25.61■■□□□ 1.69
LINC00336-201ENST00000477984 THOC2Q8NI27 1593 aaKnown RBP25.59■■□□□ 1.69
LINC00336-201ENST00000477984 ZNF316A6NFI3 1004 aaPredicted RBP25.57■■□□□ 1.68
LINC00336-201ENST00000477984 SNAPC4Q5SXM2 1469 aa25.56■■□□□ 1.68
LINC00336-201ENST00000477984 ZNF608Q9ULD9 1512 aaPredicted RBP25.54■■□□□ 1.68
LINC00336-201ENST00000477984 PHLDB1Q86UU1 1377 aa25.49■■□□□ 1.67
LINC00336-201ENST00000477984 ATP1B4Q9UN42 357 aaPredicted RBP25.48■■□□□ 1.67
LINC00336-201ENST00000477984 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
LINC00336-201ENST00000477984 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
LINC00336-201ENST00000477984 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
LINC00336-201ENST00000477984 DHX57Q6P158 1386 aaKnown RBP25.41■■□□□ 1.66
LINC00336-201ENST00000477984 UGGT2Q9NYU1 1516 aa25.39■■□□□ 1.65
LINC00336-201ENST00000477984 GTF3C3Q9Y5Q9 886 aa25.38■■□□□ 1.65
LINC00336-201ENST00000477984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.36■■□□□ 1.65
LINC00336-201ENST00000477984 LRRIQ1Q96JM4 1722 aa25.35■■□□□ 1.65
LINC00336-201ENST00000477984 KIAA0586Q9BVV6 1533 aa25.35■■□□□ 1.65
LINC00336-201ENST00000477984 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
LINC00336-201ENST00000477984 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
LINC00336-201ENST00000477984 MTUS2Q5JR59 1369 aa25.33■■□□□ 1.64
LINC00336-201ENST00000477984 CCDC18Q5T9S5 1454 aa25.32■■□□□ 1.64
LINC00336-201ENST00000477984 ITGAEP38570 1179 aa25.3■■□□□ 1.64
LINC00336-201ENST00000477984 HECW1Q76N89 1606 aa25.29■■□□□ 1.64
LINC00336-201ENST00000477984 EHBP1L1Q8N3D4 1523 aa25.29■■□□□ 1.64
LINC00336-201ENST00000477984 FAM50AQ14320 339 aaKnown RBP25.27■■□□□ 1.64
LINC00336-201ENST00000477984 RAB3GAP2Q9H2M9 1393 aa25.26■■□□□ 1.63
LINC00336-201ENST00000477984 FGD6Q6ZV73 1430 aa25.26■■□□□ 1.63
LINC00336-201ENST00000477984 SETD5Q9C0A6 1442 aa25.25■■□□□ 1.63
LINC00336-201ENST00000477984 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
LINC00336-201ENST00000477984 NCOA2Q15596 1464 aa25.23■■□□□ 1.63
LINC00336-201ENST00000477984 SUPT6HQ7KZ85 1726 aaKnown RBP25.23■■□□□ 1.63
LINC00336-201ENST00000477984 KIAA0556O60303 1618 aa25.22■■□□□ 1.63
LINC00336-201ENST00000477984 DISP1Q96F81 1524 aa25.22■■□□□ 1.63
LINC00336-201ENST00000477984 ARHGEF11O15085 1522 aa25.2■■□□□ 1.62
LINC00336-201ENST00000477984 EPRSP07814 1512 aaKnown RBP25.2■■□□□ 1.62
LINC00336-201ENST00000477984 MYOM3Q5VTT5 1437 aa25.18■■□□□ 1.62
LINC00336-201ENST00000477984 MAGI3Q5TCQ9 1506 aa25.18■■□□□ 1.62
LINC00336-201ENST00000477984 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
LINC00336-201ENST00000477984 CEP170Q5SW79 1584 aa25.16■■□□□ 1.62
LINC00336-201ENST00000477984 NUP160Q12769 1436 aa25.13■■□□□ 1.61
LINC00336-201ENST00000477984 MIER1Q8N108 512 aa25.1■■□□□ 1.61
LINC00336-201ENST00000477984 CDK13Q14004 1512 aaKnown RBP25.09■■□□□ 1.61
LINC00336-201ENST00000477984 MAPKBP1O60336 1514 aa25.08■■□□□ 1.61
LINC00336-201ENST00000477984 TCOF1Q13428 1488 aaKnown RBP25.05■■□□□ 1.6
LINC00336-201ENST00000477984 RAPGEF6Q8TEU7 1601 aa25.05■■□□□ 1.6
LINC00336-201ENST00000477984 PTPN23Q9H3S7 1636 aa25.05■■□□□ 1.6
LINC00336-201ENST00000477984 NUP153P49790 1475 aaKnown RBP25.03■■□□□ 1.6
LINC00336-201ENST00000477984 MYT1Q01538 1121 aa25.02■■□□□ 1.6
LINC00336-201ENST00000477984 PTPRKQ15262 1439 aa25.02■■□□□ 1.6
LINC00336-201ENST00000477984 FBLN2P98095 1184 aa25.01■■□□□ 1.59
LINC00336-201ENST00000477984 HFM1A2PYH4 1435 aa25.01■■□□□ 1.59
LINC00336-201ENST00000477984 CARMIL2Q6F5E8 1435 aa25■■□□□ 1.59
LINC00336-201ENST00000477984 MIA2Q96PC5 1412 aa25■■□□□ 1.59
LINC00336-201ENST00000477984 JPH4Q96JJ6 628 aa24.97■■□□□ 1.59
LINC00336-201ENST00000477984 NAIPQ13075 1403 aa24.91■■□□□ 1.58
LINC00336-201ENST00000477984 CDK11AQ9UQ88 783 aaPredicted RBP24.91■■□□□ 1.58
LINC00336-201ENST00000477984 ARID3CA6NKF2 412 aa24.91■■□□□ 1.58
LINC00336-201ENST00000477984 YTHDC1Q96MU7 727 aaKnown RBP24.9■■□□□ 1.58
LINC00336-201ENST00000477984 PLB1Q6P1J6 1458 aa24.88■■□□□ 1.57
LINC00336-201ENST00000477984 AKNAQ7Z591 1439 aa24.88■■□□□ 1.57
LINC00336-201ENST00000477984 UACAQ9BZF9 1416 aa24.86■■□□□ 1.57
LINC00336-201ENST00000477984 TROQ12816 1431 aaPredicted RBP24.85■■□□□ 1.57
LINC00336-201ENST00000477984 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
LINC00336-201ENST00000477984 ABCA8O94911 1581 aa24.82■■□□□ 1.56
LINC00336-201ENST00000477984 GCC2Q8IWJ2 1684 aa24.81■■□□□ 1.56
LINC00336-201ENST00000477984 PRG4Q92954 1404 aaPredicted RBP24.79■■□□□ 1.56
LINC00336-201ENST00000477984 ADCY10Q96PN6 1610 aa24.79■■□□□ 1.56
LINC00336-201ENST00000477984 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
LINC00336-201ENST00000477984 CHD1O14646 1710 aa24.75■■□□□ 1.55
LINC00336-201ENST00000477984 DNMT1P26358 1616 aaKnown RBP24.73■■□□□ 1.55
LINC00336-201ENST00000477984 DAPK1P53355 1430 aa24.73■■□□□ 1.55
LINC00336-201ENST00000477984 ROCK1Q13464 1354 aa24.72■■□□□ 1.55
LINC00336-201ENST00000477984 ITSN2Q9NZM3 1697 aa24.72■■□□□ 1.55
LINC00336-201ENST00000477984 RRP7BPQ9NSQ0 103 aa24.71■■□□□ 1.55
LINC00336-201ENST00000477984 CHIC2Q9UKJ5 165 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms