RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
LINC00336-201ENST00000477984 CCDC180Q9P1Z9 1646 aa32.14■■■□□ 2.74
LINC00336-201ENST00000477984 ZCCHC6Q5VYS8 1495 aaKnown RBP31.44■■■□□ 2.62
LINC00336-201ENST00000477984 SHROOM4Q9ULL8 1493 aa30.86■■■□□ 2.53
LINC00336-201ENST00000477984 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
LINC00336-201ENST00000477984 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
LINC00336-201ENST00000477984 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
LINC00336-201ENST00000477984 ABCC9O60706 1549 aa30.13■■■□□ 2.41
LINC00336-201ENST00000477984 SUPT5HO00267 1087 aaKnown RBP29.99■■■□□ 2.39
LINC00336-201ENST00000477984 NACADO15069 1562 aa29.82■■■□□ 2.36
LINC00336-201ENST00000477984 SCRIBQ14160 1630 aa29.7■■■□□ 2.34
LINC00336-201ENST00000477984 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
LINC00336-201ENST00000477984 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
LINC00336-201ENST00000477984 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
LINC00336-201ENST00000477984 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
LINC00336-201ENST00000477984 MROH2BQ7Z745 1585 aa28.83■■■□□ 2.21
LINC00336-201ENST00000477984 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
LINC00336-201ENST00000477984 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
LINC00336-201ENST00000477984 WIZO95785 1651 aa28.6■■■□□ 2.17
LINC00336-201ENST00000477984 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
LINC00336-201ENST00000477984 SMARCA4P51532 1647 aa28.5■■■□□ 2.15
LINC00336-201ENST00000477984 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
LINC00336-201ENST00000477984 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
LINC00336-201ENST00000477984 HRCP23327 699 aa28.2■■■□□ 2.1
LINC00336-201ENST00000477984 TRIM41Q8WV44 630 aa28.15■■■□□ 2.1
LINC00336-201ENST00000477984 PEG3Q9GZU2 1588 aa28.13■■■□□ 2.09
LINC00336-201ENST00000477984 EIF4G1Q04637 1599 aaKnown RBP28.12■■■□□ 2.09
LINC00336-201ENST00000477984 SMARCA2P51531 1590 aa28.08■■■□□ 2.09
LINC00336-201ENST00000477984 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
LINC00336-201ENST00000477984 LOC105371045A0A1W2PR82 267 aa27.97■■■□□ 2.07
LINC00336-201ENST00000477984 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
LINC00336-201ENST00000477984 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
LINC00336-201ENST00000477984 PCGF6Q9BYE7 350 aa27.75■■■□□ 2.03
LINC00336-201ENST00000477984 ABCC8Q09428 1581 aa27.67■■■□□ 2.02
LINC00336-201ENST00000477984 FAM9AQ8IZU1 332 aaPredicted RBP27.66■■■□□ 2.02
LINC00336-201ENST00000477984 NCAPD3P42695 1498 aa27.55■■■□□ 2
LINC00336-201ENST00000477984 HMGXB3Q12766 1538 aa27.55■■■□□ 2
LINC00336-201ENST00000477984 WRNQ14191 1432 aaPredicted RBP eCLIP27.42■■□□□ 1.98
LINC00336-201ENST00000477984 TRIM26Q12899 539 aaPredicted RBP27.41■■□□□ 1.98
LINC00336-201ENST00000477984 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
LINC00336-201ENST00000477984 EEA1Q15075 1411 aa27.35■■□□□ 1.97
LINC00336-201ENST00000477984 SOGA1O94964 1423 aa27.3■■□□□ 1.96
LINC00336-201ENST00000477984 SYNJ1O43426 1573 aa27.28■■□□□ 1.96
LINC00336-201ENST00000477984 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
LINC00336-201ENST00000477984 PPARGC1BQ86YN6 1023 aaKnown RBP27.23■■□□□ 1.95
LINC00336-201ENST00000477984 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
LINC00336-201ENST00000477984 RUSC2Q8N2Y8 1516 aa27.16■■□□□ 1.94
LINC00336-201ENST00000477984 CSRNP3Q8WYN3 585 aa27.16■■□□□ 1.94
LINC00336-201ENST00000477984 TOP2BQ02880 1626 aa27.11■■□□□ 1.93
LINC00336-201ENST00000477984 CFTRP13569 1480 aa27.11■■□□□ 1.93
LINC00336-201ENST00000477984 ZEB1P37275 1124 aaPredicted RBP27.09■■□□□ 1.93
LINC00336-201ENST00000477984 BIVM-ERCC5R4GMW8 1640 aa27.06■■□□□ 1.92
LINC00336-201ENST00000477984 TNIKQ9UKE5 1360 aa27.06■■□□□ 1.92
LINC00336-201ENST00000477984 GOLGA3Q08378 1498 aa27.01■■□□□ 1.91
LINC00336-201ENST00000477984 KIF21BO75037 1637 aa26.95■■□□□ 1.91
LINC00336-201ENST00000477984 CEP162Q5TB80 1403 aa26.95■■□□□ 1.9
LINC00336-201ENST00000477984 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
LINC00336-201ENST00000477984 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
LINC00336-201ENST00000477984 CUX1P39880 1505 aa26.91■■□□□ 1.9
LINC00336-201ENST00000477984 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.9
LINC00336-201ENST00000477984 UBTFP17480 764 aaKnown RBP26.85■■□□□ 1.89
LINC00336-201ENST00000477984 RAPGEF2Q9Y4G8 1499 aa26.71■■□□□ 1.87
LINC00336-201ENST00000477984 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
LINC00336-201ENST00000477984 PRXQ9BXM0 1461 aa26.66■■□□□ 1.86
LINC00336-201ENST00000477984 ERICH3Q5RHP9 1530 aa26.66■■□□□ 1.86
LINC00336-201ENST00000477984 CLIP1P30622 1438 aa26.6■■□□□ 1.85
LINC00336-201ENST00000477984 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
LINC00336-201ENST00000477984 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
LINC00336-201ENST00000477984 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
LINC00336-201ENST00000477984 CUX2O14529 1486 aa26.46■■□□□ 1.83
LINC00336-201ENST00000477984 VPS8Q8N3P4 1428 aa26.46■■□□□ 1.83
LINC00336-201ENST00000477984 NESP48681 1621 aa26.46■■□□□ 1.83
LINC00336-201ENST00000477984 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
LINC00336-201ENST00000477984 IGF1RP08069 1367 aa26.38■■□□□ 1.81
LINC00336-201ENST00000477984 TOPBP1Q92547 1522 aa26.37■■□□□ 1.81
LINC00336-201ENST00000477984 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
LINC00336-201ENST00000477984 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
LINC00336-201ENST00000477984 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
LINC00336-201ENST00000477984 PDS5BQ9NTI5 1447 aa26.27■■□□□ 1.8
LINC00336-201ENST00000477984 CARMIL1Q5VZK9 1371 aa26.25■■□□□ 1.79
LINC00336-201ENST00000477984 TTBK1Q5TCY1 1321 aaPredicted RBP26.25■■□□□ 1.79
LINC00336-201ENST00000477984 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
LINC00336-201ENST00000477984 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
LINC00336-201ENST00000477984 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
LINC00336-201ENST00000477984 APLP2Q06481 763 aa26.18■■□□□ 1.78
LINC00336-201ENST00000477984 PELP1Q8IZL8 1130 aaKnown RBP26.18■■□□□ 1.78
LINC00336-201ENST00000477984 ARHGAP35Q9NRY4 1499 aa26.15■■□□□ 1.78
LINC00336-201ENST00000477984 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
LINC00336-201ENST00000477984 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
LINC00336-201ENST00000477984 CUL7Q14999 1698 aa26.08■■□□□ 1.77
LINC00336-201ENST00000477984 CCER1Q8TC90 406 aaPredicted RBP26.04■■□□□ 1.76
LINC00336-201ENST00000477984 SCAF1Q9H7N4 1312 aaKnown RBP26.03■■□□□ 1.76
LINC00336-201ENST00000477984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
LINC00336-201ENST00000477984 ABCA5Q8WWZ7 1642 aa26.01■■□□□ 1.76
LINC00336-201ENST00000477984 GAPVD1Q14C86 1478 aa25.94■■□□□ 1.74
LINC00336-201ENST00000477984 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
LINC00336-201ENST00000477984 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
LINC00336-201ENST00000477984 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
LINC00336-201ENST00000477984 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
LINC00336-201ENST00000477984 KANK4Q5T7N3 995 aaPredicted RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms