RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 RIMBP3Q9UFD9 1639 aa21.28■■□□□ 1
APTX-220ENST00000476858 CEP170Q5SW79 1584 aa21.27■■□□□ 1
APTX-220ENST00000476858 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
APTX-220ENST00000476858 ADRA2BP18089 450 aa21.26■□□□□ 0.99
APTX-220ENST00000476858 NUP160Q12769 1436 aa21.22■□□□□ 0.99
APTX-220ENST00000476858 CUL7Q14999 1698 aa21.16■□□□□ 0.98
APTX-220ENST00000476858 ERCC6L2Q5T890 1561 aa21.15■□□□□ 0.98
APTX-220ENST00000476858 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
APTX-220ENST00000476858 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
APTX-220ENST00000476858 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
APTX-220ENST00000476858 CYB5RLQ6IPT4 315 aa21.06■□□□□ 0.96
APTX-220ENST00000476858 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
APTX-220ENST00000476858 FAM9AQ8IZU1 332 aaPredicted RBP21■□□□□ 0.95
APTX-220ENST00000476858 KIAA0586Q9BVV6 1533 aa20.99■□□□□ 0.95
APTX-220ENST00000476858 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
APTX-220ENST00000476858 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
APTX-220ENST00000476858 PRG4Q92954 1404 aaPredicted RBP20.97■□□□□ 0.95
APTX-220ENST00000476858 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
APTX-220ENST00000476858 IQGAP2Q13576 1575 aa20.89■□□□□ 0.93
APTX-220ENST00000476858 EEA1Q15075 1411 aa20.84■□□□□ 0.93
APTX-220ENST00000476858 CTTNBP2Q8WZ74 1663 aa20.82■□□□□ 0.92
APTX-220ENST00000476858 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
APTX-220ENST00000476858 DISP1Q96F81 1524 aa20.81■□□□□ 0.92
APTX-220ENST00000476858 UGGT2Q9NYU1 1516 aa20.78■□□□□ 0.92
APTX-220ENST00000476858 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
APTX-220ENST00000476858 KIF21BO75037 1637 aa20.74■□□□□ 0.91
APTX-220ENST00000476858 KIAA0556O60303 1618 aa20.72■□□□□ 0.91
APTX-220ENST00000476858 ADCY10Q96PN6 1610 aa20.7■□□□□ 0.9
APTX-220ENST00000476858 CARMIL2Q6F5E8 1435 aa20.69■□□□□ 0.9
APTX-220ENST00000476858 TNIKQ9UKE5 1360 aa20.68■□□□□ 0.9
APTX-220ENST00000476858 PTPRGP23470 1445 aa20.68■□□□□ 0.9
APTX-220ENST00000476858 RANGAP1P46060 587 aaPredicted RBP20.65■□□□□ 0.9
APTX-220ENST00000476858 P3H3Q8IVL6 736 aa20.64■□□□□ 0.89
APTX-220ENST00000476858 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
APTX-220ENST00000476858 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
APTX-220ENST00000476858 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
APTX-220ENST00000476858 PLB1Q6P1J6 1458 aa20.56■□□□□ 0.88
APTX-220ENST00000476858 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
APTX-220ENST00000476858 UACAQ9BZF9 1416 aa20.54■□□□□ 0.88
APTX-220ENST00000476858 ABCC2Q92887 1545 aa20.53■□□□□ 0.88
APTX-220ENST00000476858 FHOD3Q2V2M9 1422 aa20.52■□□□□ 0.87
APTX-220ENST00000476858 UHRF1BP1LA0JNW5 1464 aa20.51■□□□□ 0.87
APTX-220ENST00000476858 ABCA8O94911 1581 aa20.51■□□□□ 0.87
APTX-220ENST00000476858 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
APTX-220ENST00000476858 KIF13AQ9H1H9 1805 aa20.45■□□□□ 0.86
APTX-220ENST00000476858 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.86
APTX-220ENST00000476858 KDM5BQ9UGL1 1544 aa20.44■□□□□ 0.86
APTX-220ENST00000476858 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
APTX-220ENST00000476858 NPM1P06748 294 aaKnown RBP eCLIP20.44■□□□□ 0.86
APTX-220ENST00000476858 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
APTX-220ENST00000476858 ASXL2Q76L83 1435 aa20.41■□□□□ 0.86
APTX-220ENST00000476858 DIP2BQ9P265 1576 aa20.41■□□□□ 0.86
APTX-220ENST00000476858 EFCAB5A4FU69 1503 aa20.4■□□□□ 0.86
APTX-220ENST00000476858 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
APTX-220ENST00000476858 LOC105371045A0A1W2PR82 267 aa20.37■□□□□ 0.85
APTX-220ENST00000476858 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
APTX-220ENST00000476858 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
APTX-220ENST00000476858 ATP10BO94823 1461 aa20.35■□□□□ 0.85
APTX-220ENST00000476858 NUP153P49790 1475 aaKnown RBP20.35■□□□□ 0.85
APTX-220ENST00000476858 EPRSP07814 1512 aaKnown RBP20.28■□□□□ 0.84
APTX-220ENST00000476858 WDR7Q9Y4E6 1490 aa20.27■□□□□ 0.84
APTX-220ENST00000476858 CLIP1P30622 1438 aa20.26■□□□□ 0.83
APTX-220ENST00000476858 TSPOAP1O95153 1857 aa20.25■□□□□ 0.83
APTX-220ENST00000476858 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
APTX-220ENST00000476858 PPRC1Q5VV67 1664 aaKnown RBP20.23■□□□□ 0.83
APTX-220ENST00000476858 GLI2P10070 1586 aa20.23■□□□□ 0.83
APTX-220ENST00000476858 KCNH8Q96L42 1107 aa20.23■□□□□ 0.83
APTX-220ENST00000476858 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
APTX-220ENST00000476858 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
APTX-220ENST00000476858 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
APTX-220ENST00000476858 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
APTX-220ENST00000476858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
APTX-220ENST00000476858 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
APTX-220ENST00000476858 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
APTX-220ENST00000476858 MAP3K4Q9Y6R4 1608 aa20.19■□□□□ 0.82
APTX-220ENST00000476858 HECW1Q76N89 1606 aa20.15■□□□□ 0.82
APTX-220ENST00000476858 CASKIN1Q8WXD9 1431 aa20.11■□□□□ 0.81
APTX-220ENST00000476858 COL17A1Q9UMD9 1497 aaPredicted RBP20.09■□□□□ 0.81
APTX-220ENST00000476858 CD109Q6YHK3 1445 aa20.08■□□□□ 0.8
APTX-220ENST00000476858 CFAP43Q8NDM7 1665 aa20.07■□□□□ 0.8
APTX-220ENST00000476858 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
APTX-220ENST00000476858 MAGI3Q5TCQ9 1506 aa20.07■□□□□ 0.8
APTX-220ENST00000476858 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
APTX-220ENST00000476858 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
APTX-220ENST00000476858 TTC37Q6PGP7 1564 aa20.04■□□□□ 0.8
APTX-220ENST00000476858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.8
APTX-220ENST00000476858 KDM6BO15054 1643 aa20.03■□□□□ 0.8
APTX-220ENST00000476858 KIF14Q15058 1648 aa20.03■□□□□ 0.8
APTX-220ENST00000476858 TROQ12816 1431 aaPredicted RBP19.97■□□□□ 0.79
APTX-220ENST00000476858 TEX14Q8IWB6 1497 aa19.97■□□□□ 0.79
APTX-220ENST00000476858 CCDC18Q5T9S5 1454 aa19.96■□□□□ 0.79
APTX-220ENST00000476858 VPS8Q8N3P4 1428 aa19.91■□□□□ 0.78
APTX-220ENST00000476858 CDK11AQ9UQ88 783 aaPredicted RBP19.89■□□□□ 0.77
APTX-220ENST00000476858 PLCH2O75038 1416 aa19.86■□□□□ 0.77
APTX-220ENST00000476858 FRMPD1Q5SYB0 1578 aa19.86■□□□□ 0.77
APTX-220ENST00000476858 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
APTX-220ENST00000476858 FANCAO15360 1455 aa19.86■□□□□ 0.77
APTX-220ENST00000476858 RAPGEF3O95398 923 aa19.85■□□□□ 0.77
APTX-220ENST00000476858 NEO1Q92859 1461 aa19.85■□□□□ 0.77
APTX-220ENST00000476858 MYO5CQ9NQX4 1742 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms