RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
HDAC6-219ENST00000476625 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
HDAC6-219ENST00000476625 DIP2BQ9P265 1576 aa21.42■■□□□ 1.02
HDAC6-219ENST00000476625 TSPOAP1O95153 1857 aa21.4■■□□□ 1.02
HDAC6-219ENST00000476625 ABCC10Q5T3U5 1492 aa21.37■■□□□ 1.01
HDAC6-219ENST00000476625 MAPKBP1O60336 1514 aa21.35■■□□□ 1.01
HDAC6-219ENST00000476625 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
HDAC6-219ENST00000476625 CUL7Q14999 1698 aa21.33■■□□□ 1
HDAC6-219ENST00000476625 IGF1RP08069 1367 aa21.3■■□□□ 1
HDAC6-219ENST00000476625 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
HDAC6-219ENST00000476625 KDM6BO15054 1643 aa21.28■■□□□ 1
HDAC6-219ENST00000476625 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
HDAC6-219ENST00000476625 NPM1P06748 294 aaKnown RBP eCLIP21.25■□□□□ 0.99
HDAC6-219ENST00000476625 KIF27Q86VH2 1401 aa21.24■□□□□ 0.99
HDAC6-219ENST00000476625 PPRC1Q5VV67 1664 aaKnown RBP21.19■□□□□ 0.98
HDAC6-219ENST00000476625 KDM4FA0A1W2PPD8 638 aa21.16■□□□□ 0.98
HDAC6-219ENST00000476625 IQGAP2Q13576 1575 aa21.14■□□□□ 0.98
HDAC6-219ENST00000476625 PTPRGP23470 1445 aa21.14■□□□□ 0.98
HDAC6-219ENST00000476625 CARMIL1Q5VZK9 1371 aa21.14■□□□□ 0.98
HDAC6-219ENST00000476625 ABCC2Q92887 1545 aa21.11■□□□□ 0.97
HDAC6-219ENST00000476625 ASXL2Q76L83 1435 aa21.08■□□□□ 0.97
HDAC6-219ENST00000476625 DISP1Q96F81 1524 aa21.08■□□□□ 0.96
HDAC6-219ENST00000476625 TNIKQ9UKE5 1360 aa21.08■□□□□ 0.96
HDAC6-219ENST00000476625 CARMIL2Q6F5E8 1435 aa21.04■□□□□ 0.96
HDAC6-219ENST00000476625 ZCCHC11Q5TAX3 1644 aaKnown RBP21.04■□□□□ 0.96
HDAC6-219ENST00000476625 GLI2P10070 1586 aa21.03■□□□□ 0.96
HDAC6-219ENST00000476625 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
HDAC6-219ENST00000476625 UHRF1BP1LA0JNW5 1464 aa21■□□□□ 0.95
HDAC6-219ENST00000476625 COL17A1Q9UMD9 1497 aaPredicted RBP21■□□□□ 0.95
HDAC6-219ENST00000476625 KIAA0556O60303 1618 aa21■□□□□ 0.95
HDAC6-219ENST00000476625 UACAQ9BZF9 1416 aa20.99■□□□□ 0.95
HDAC6-219ENST00000476625 PLB1Q6P1J6 1458 aa20.98■□□□□ 0.95
HDAC6-219ENST00000476625 EPRSP07814 1512 aaKnown RBP20.96■□□□□ 0.95
HDAC6-219ENST00000476625 UGGT2Q9NYU1 1516 aa20.96■□□□□ 0.95
HDAC6-219ENST00000476625 ADGRL1O94910 1474 aa20.95■□□□□ 0.94
HDAC6-219ENST00000476625 CTTNBP2Q8WZ74 1663 aa20.95■□□□□ 0.94
HDAC6-219ENST00000476625 KDM5BQ9UGL1 1544 aa20.94■□□□□ 0.94
HDAC6-219ENST00000476625 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
HDAC6-219ENST00000476625 WDR7Q9Y4E6 1490 aa20.81■□□□□ 0.92
HDAC6-219ENST00000476625 TEX14Q8IWB6 1497 aa20.8■□□□□ 0.92
HDAC6-219ENST00000476625 ABCA8O94911 1581 aa20.8■□□□□ 0.92
HDAC6-219ENST00000476625 HECW2Q9P2P5 1572 aa20.79■□□□□ 0.92
HDAC6-219ENST00000476625 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
HDAC6-219ENST00000476625 ILDR1Q86SU0 546 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-219ENST00000476625 KIF21BO75037 1637 aa20.75■□□□□ 0.91
HDAC6-219ENST00000476625 KCNH8Q96L42 1107 aa20.73■□□□□ 0.91
HDAC6-219ENST00000476625 ARID3CA6NKF2 412 aa20.72■□□□□ 0.91
HDAC6-219ENST00000476625 CD109Q6YHK3 1445 aa20.7■□□□□ 0.9
HDAC6-219ENST00000476625 GOLGA3Q08378 1498 aa20.68■□□□□ 0.9
HDAC6-219ENST00000476625 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
HDAC6-219ENST00000476625 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
HDAC6-219ENST00000476625 P3H3Q8IVL6 736 aa20.66■□□□□ 0.9
HDAC6-219ENST00000476625 ATP10BO94823 1461 aa20.59■□□□□ 0.89
HDAC6-219ENST00000476625 SAMD9Q5K651 1589 aa20.57■□□□□ 0.88
HDAC6-219ENST00000476625 ABCA9Q8IUA7 1624 aa20.56■□□□□ 0.88
HDAC6-219ENST00000476625 RAPGEF6Q8TEU7 1601 aa20.55■□□□□ 0.88
HDAC6-219ENST00000476625 ARAP3Q8WWN8 1544 aa20.53■□□□□ 0.88
HDAC6-219ENST00000476625 FRMPD1Q5SYB0 1578 aa20.52■□□□□ 0.88
HDAC6-219ENST00000476625 ADAMTSL3P82987 1691 aa20.5■□□□□ 0.87
HDAC6-219ENST00000476625 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
HDAC6-219ENST00000476625 RAPGEF3O95398 923 aa20.46■□□□□ 0.87
HDAC6-219ENST00000476625 MADDQ8WXG6 1647 aa20.45■□□□□ 0.86
HDAC6-219ENST00000476625 BCORL1Q5H9F3 1711 aa20.44■□□□□ 0.86
HDAC6-219ENST00000476625 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
HDAC6-219ENST00000476625 FHOD3Q2V2M9 1422 aa20.44■□□□□ 0.86
HDAC6-219ENST00000476625 PTPRMP28827 1452 aa20.43■□□□□ 0.86
HDAC6-219ENST00000476625 SIGLEC1Q9BZZ2 1709 aa20.41■□□□□ 0.86
HDAC6-219ENST00000476625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.4■□□□□ 0.86
HDAC6-219ENST00000476625 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
HDAC6-219ENST00000476625 RICTORQ6R327 1708 aa20.4■□□□□ 0.86
HDAC6-219ENST00000476625 RIMS1Q86UR5 1692 aaKnown RBP20.39■□□□□ 0.86
HDAC6-219ENST00000476625 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
HDAC6-219ENST00000476625 NEO1Q92859 1461 aa20.37■□□□□ 0.85
HDAC6-219ENST00000476625 TTC37Q6PGP7 1564 aa20.37■□□□□ 0.85
HDAC6-219ENST00000476625 ARHGEF40Q8TER5 1519 aa20.35■□□□□ 0.85
HDAC6-219ENST00000476625 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-219ENST00000476625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.33■□□□□ 0.85
HDAC6-219ENST00000476625 CDK13Q14004 1512 aaKnown RBP20.31■□□□□ 0.84
HDAC6-219ENST00000476625 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
HDAC6-219ENST00000476625 ARID4BQ4LE39 1312 aaPredicted RBP20.29■□□□□ 0.84
HDAC6-219ENST00000476625 PHLDB1Q86UU1 1377 aa20.29■□□□□ 0.84
HDAC6-219ENST00000476625 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
HDAC6-219ENST00000476625 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
HDAC6-219ENST00000476625 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
HDAC6-219ENST00000476625 FANCAO15360 1455 aa20.26■□□□□ 0.83
HDAC6-219ENST00000476625 AKNAQ7Z591 1439 aa20.26■□□□□ 0.83
HDAC6-219ENST00000476625 CFAP74Q9C0B2 1584 aa20.25■□□□□ 0.83
HDAC6-219ENST00000476625 DENND4BO75064 1496 aaPredicted RBP20.25■□□□□ 0.83
HDAC6-219ENST00000476625 YEATS2Q9ULM3 1422 aa20.25■□□□□ 0.83
HDAC6-219ENST00000476625 HECW1Q76N89 1606 aa20.22■□□□□ 0.83
HDAC6-219ENST00000476625 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
HDAC6-219ENST00000476625 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
HDAC6-219ENST00000476625 FER1L4A9Z1Z3 1794 aa20.21■□□□□ 0.83
HDAC6-219ENST00000476625 EFCAB5A4FU69 1503 aa20.21■□□□□ 0.83
HDAC6-219ENST00000476625 PLEKHD1A6NEE1 506 aa20.2■□□□□ 0.82
HDAC6-219ENST00000476625 HSPA2P54652 639 aa20.2■□□□□ 0.82
HDAC6-219ENST00000476625 FBXO41Q8TF61 875 aa20.19■□□□□ 0.82
HDAC6-219ENST00000476625 LRRIQ1Q96JM4 1722 aa20.19■□□□□ 0.82
HDAC6-219ENST00000476625 EEA1Q15075 1411 aa20.19■□□□□ 0.82
HDAC6-219ENST00000476625 KIF14Q15058 1648 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms