RNA–Protein interactions for RNA: ENST00000476068.1

C1GALT1-207, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best)

Gene C1GALT1, Length 1,186 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-207ENST00000476068 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
C1GALT1-207ENST00000476068 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
C1GALT1-207ENST00000476068 KDM6BO15054 1643 aa23.37■■□□□ 1.33
C1GALT1-207ENST00000476068 ILDR1Q86SU0 546 aaPredicted RBP23.36■■□□□ 1.33
C1GALT1-207ENST00000476068 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
C1GALT1-207ENST00000476068 JPH4Q96JJ6 628 aa23.34■■□□□ 1.33
C1GALT1-207ENST00000476068 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
C1GALT1-207ENST00000476068 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.33
C1GALT1-207ENST00000476068 TSPOAP1O95153 1857 aa23.32■■□□□ 1.32
C1GALT1-207ENST00000476068 NPM1P06748 294 aaKnown RBP eCLIP23.29■■□□□ 1.32
C1GALT1-207ENST00000476068 ADGRL1O94910 1474 aa23.09■■□□□ 1.29
C1GALT1-207ENST00000476068 PPRC1Q5VV67 1664 aaKnown RBP23.08■■□□□ 1.29
C1GALT1-207ENST00000476068 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
C1GALT1-207ENST00000476068 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
C1GALT1-207ENST00000476068 HECW2Q9P2P5 1572 aa23.01■■□□□ 1.27
C1GALT1-207ENST00000476068 GLI2P10070 1586 aa22.98■■□□□ 1.27
C1GALT1-207ENST00000476068 PTPRGP23470 1445 aa22.98■■□□□ 1.27
C1GALT1-207ENST00000476068 ABCC2Q92887 1545 aa22.98■■□□□ 1.27
C1GALT1-207ENST00000476068 ASXL2Q76L83 1435 aa22.96■■□□□ 1.27
C1GALT1-207ENST00000476068 CUL7Q14999 1698 aa22.96■■□□□ 1.27
C1GALT1-207ENST00000476068 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.26
C1GALT1-207ENST00000476068 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
C1GALT1-207ENST00000476068 PLB1Q6P1J6 1458 aa22.92■■□□□ 1.26
C1GALT1-207ENST00000476068 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
C1GALT1-207ENST00000476068 IGF1RP08069 1367 aa22.91■■□□□ 1.26
C1GALT1-207ENST00000476068 TNIKQ9UKE5 1360 aa22.88■■□□□ 1.25
C1GALT1-207ENST00000476068 MAP3K4Q9Y6R4 1608 aa22.87■■□□□ 1.25
C1GALT1-207ENST00000476068 CARMIL2Q6F5E8 1435 aa22.84■■□□□ 1.25
C1GALT1-207ENST00000476068 UHRF1BP1LA0JNW5 1464 aa22.84■■□□□ 1.25
C1GALT1-207ENST00000476068 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
C1GALT1-207ENST00000476068 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
C1GALT1-207ENST00000476068 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
C1GALT1-207ENST00000476068 UACAQ9BZF9 1416 aa22.79■■□□□ 1.24
C1GALT1-207ENST00000476068 TEX14Q8IWB6 1497 aa22.79■■□□□ 1.24
C1GALT1-207ENST00000476068 ZCCHC11Q5TAX3 1644 aaKnown RBP22.76■■□□□ 1.23
C1GALT1-207ENST00000476068 KDM5BQ9UGL1 1544 aa22.76■■□□□ 1.23
C1GALT1-207ENST00000476068 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
C1GALT1-207ENST00000476068 DISP1Q96F81 1524 aa22.73■■□□□ 1.23
C1GALT1-207ENST00000476068 WDR7Q9Y4E6 1490 aa22.63■■□□□ 1.21
C1GALT1-207ENST00000476068 FBXO41Q8TF61 875 aa22.63■■□□□ 1.21
C1GALT1-207ENST00000476068 KIF21BO75037 1637 aa22.62■■□□□ 1.21
C1GALT1-207ENST00000476068 KIAA0556O60303 1618 aa22.61■■□□□ 1.21
C1GALT1-207ENST00000476068 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
C1GALT1-207ENST00000476068 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.21
C1GALT1-207ENST00000476068 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
C1GALT1-207ENST00000476068 CD109Q6YHK3 1445 aa22.54■■□□□ 1.2
C1GALT1-207ENST00000476068 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
C1GALT1-207ENST00000476068 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
C1GALT1-207ENST00000476068 ADAMTSL3P82987 1691 aa22.45■■□□□ 1.18
C1GALT1-207ENST00000476068 ABCA8O94911 1581 aa22.44■■□□□ 1.18
C1GALT1-207ENST00000476068 PTPRMP28827 1452 aa22.43■■□□□ 1.18
C1GALT1-207ENST00000476068 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
C1GALT1-207ENST00000476068 ARAP3Q8WWN8 1544 aa22.41■■□□□ 1.18
C1GALT1-207ENST00000476068 PCF11O94913 1555 aaKnown RBP22.36■■□□□ 1.17
C1GALT1-207ENST00000476068 MADDQ8WXG6 1647 aa22.33■■□□□ 1.17
C1GALT1-207ENST00000476068 BCORL1Q5H9F3 1711 aa22.33■■□□□ 1.17
C1GALT1-207ENST00000476068 GOLGA3Q08378 1498 aa22.33■■□□□ 1.16
C1GALT1-207ENST00000476068 LMTK3Q96Q04 1460 aa22.32■■□□□ 1.16
C1GALT1-207ENST00000476068 ABCA9Q8IUA7 1624 aa22.28■■□□□ 1.16
C1GALT1-207ENST00000476068 FRMPD1Q5SYB0 1578 aa22.26■■□□□ 1.15
C1GALT1-207ENST00000476068 ARID3CA6NKF2 412 aa22.26■■□□□ 1.15
C1GALT1-207ENST00000476068 RAPGEF3O95398 923 aa22.25■■□□□ 1.15
C1GALT1-207ENST00000476068 RIMS1Q86UR5 1692 aaKnown RBP22.23■■□□□ 1.15
C1GALT1-207ENST00000476068 ATP10BO94823 1461 aa22.22■■□□□ 1.15
C1GALT1-207ENST00000476068 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
C1GALT1-207ENST00000476068 ARID4BQ4LE39 1312 aaPredicted RBP22.2■■□□□ 1.14
C1GALT1-207ENST00000476068 NEO1Q92859 1461 aa22.19■■□□□ 1.14
C1GALT1-207ENST00000476068 ARHGEF40Q8TER5 1519 aa22.16■■□□□ 1.14
C1GALT1-207ENST00000476068 HSPA2P54652 639 aa22.16■■□□□ 1.14
C1GALT1-207ENST00000476068 RICTORQ6R327 1708 aa22.11■■□□□ 1.13
C1GALT1-207ENST00000476068 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
C1GALT1-207ENST00000476068 CERKQ8TCT0 537 aa22.1■■□□□ 1.13
C1GALT1-207ENST00000476068 SIGLEC1Q9BZZ2 1709 aa22.09■■□□□ 1.13
C1GALT1-207ENST00000476068 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
C1GALT1-207ENST00000476068 RAPGEF6Q8TEU7 1601 aa22.08■■□□□ 1.13
C1GALT1-207ENST00000476068 PRXQ9BXM0 1461 aa22.08■■□□□ 1.12
C1GALT1-207ENST00000476068 ILDR2Q71H61 639 aa22.05■■□□□ 1.12
C1GALT1-207ENST00000476068 DENND4BO75064 1496 aaPredicted RBP22.03■■□□□ 1.12
C1GALT1-207ENST00000476068 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
C1GALT1-207ENST00000476068 SAMD9Q5K651 1589 aa22.02■■□□□ 1.12
C1GALT1-207ENST00000476068 FANCAO15360 1455 aa22.02■■□□□ 1.12
C1GALT1-207ENST00000476068 DISP3Q9P2K9 1392 aa22.01■■□□□ 1.11
C1GALT1-207ENST00000476068 FER1L4A9Z1Z3 1794 aa22.01■■□□□ 1.11
C1GALT1-207ENST00000476068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
C1GALT1-207ENST00000476068 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
C1GALT1-207ENST00000476068 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
C1GALT1-207ENST00000476068 ZMYM4Q5VZL5 1548 aa21.99■■□□□ 1.11
C1GALT1-207ENST00000476068 POGZQ7Z3K3 1410 aa21.98■■□□□ 1.11
C1GALT1-207ENST00000476068 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
C1GALT1-207ENST00000476068 CFAP74Q9C0B2 1584 aa21.98■■□□□ 1.11
C1GALT1-207ENST00000476068 AKNAQ7Z591 1439 aa21.97■■□□□ 1.11
C1GALT1-207ENST00000476068 ZFYVE16Q7Z3T8 1539 aa21.97■■□□□ 1.11
C1GALT1-207ENST00000476068 TTC37Q6PGP7 1564 aa21.97■■□□□ 1.11
C1GALT1-207ENST00000476068 SOCS7O14512 581 aa21.97■■□□□ 1.11
C1GALT1-207ENST00000476068 YEATS2Q9ULM3 1422 aa21.97■■□□□ 1.11
C1GALT1-207ENST00000476068 EFCAB5A4FU69 1503 aa21.95■■□□□ 1.1
C1GALT1-207ENST00000476068 PREX1Q8TCU6 1659 aa21.92■■□□□ 1.1
C1GALT1-207ENST00000476068 MLECQ14165 292 aa21.92■■□□□ 1.1
C1GALT1-207ENST00000476068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.91■■□□□ 1.16e-6■■□□□ 13.3
C1GALT1-207ENST00000476068 HECW1Q76N89 1606 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms