RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 WDR97A6NE52 1622 aa23.27■■□□□ 1.32
TPR-205ENST00000474852 SETD5Q9C0A6 1442 aa23.27■■□□□ 1.32
TPR-205ENST00000474852 P3H3Q8IVL6 736 aa23.27■■□□□ 1.32
TPR-205ENST00000474852 PHLDB1Q86UU1 1377 aa23.25■■□□□ 1.31
TPR-205ENST00000474852 TIAM1Q13009 1591 aa23.24■■□□□ 1.31
TPR-205ENST00000474852 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
TPR-205ENST00000474852 IGF1RP08069 1367 aa23.21■■□□□ 1.31
TPR-205ENST00000474852 NCAPD3P42695 1498 aa23.2■■□□□ 1.3
TPR-205ENST00000474852 CFTRP13569 1480 aa23.19■■□□□ 1.3
TPR-205ENST00000474852 LRRC9Q6ZRR7 1453 aa23.18■■□□□ 1.3
TPR-205ENST00000474852 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
TPR-205ENST00000474852 PPP1R15AO75807 674 aaPredicted RBP23.14■■□□□ 1.3
TPR-205ENST00000474852 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
TPR-205ENST00000474852 NEFLP07196 543 aa23.11■■□□□ 1.29
TPR-205ENST00000474852 ANP32CO43423 234 aa23.08■■□□□ 1.29
TPR-205ENST00000474852 MAP3K1Q13233 1512 aa23.07■■□□□ 1.28
TPR-205ENST00000474852 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
TPR-205ENST00000474852 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
TPR-205ENST00000474852 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
TPR-205ENST00000474852 FHOD3Q2V2M9 1422 aa23.02■■□□□ 1.28
TPR-205ENST00000474852 RBM19Q9Y4C8 960 aaKnown RBP22.99■■□□□ 1.27
TPR-205ENST00000474852 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
TPR-205ENST00000474852 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
TPR-205ENST00000474852 TONSLQ96HA7 1378 aa22.96■■□□□ 1.27
TPR-205ENST00000474852 CFAP43Q8NDM7 1665 aa22.95■■□□□ 1.26
TPR-205ENST00000474852 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
TPR-205ENST00000474852 IRX6P78412 446 aaPredicted RBP22.89■■□□□ 1.25
TPR-205ENST00000474852 PRDM2Q13029 1718 aa22.89■■□□□ 1.25
TPR-205ENST00000474852 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
TPR-205ENST00000474852 CCDC18Q5T9S5 1454 aa22.85■■□□□ 1.25
TPR-205ENST00000474852 FYCO1Q9BQS8 1478 aa22.83■■□□□ 1.25
TPR-205ENST00000474852 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
TPR-205ENST00000474852 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
TPR-205ENST00000474852 CASKIN1Q8WXD9 1431 aa22.8■■□□□ 1.24
TPR-205ENST00000474852 PTPRKQ15262 1439 aa22.8■■□□□ 1.24
TPR-205ENST00000474852 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
TPR-205ENST00000474852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.75■■□□□ 1.235e-6■■■□□ 14.8
TPR-205ENST00000474852 UACAQ9BZF9 1416 aa22.75■■□□□ 1.23
TPR-205ENST00000474852 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
TPR-205ENST00000474852 MSH5O43196 834 aa22.72■■□□□ 1.23
TPR-205ENST00000474852 HFM1A2PYH4 1435 aa22.72■■□□□ 1.23
TPR-205ENST00000474852 EFCAB5A4FU69 1503 aa22.71■■□□□ 1.23
TPR-205ENST00000474852 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.231e-6■■■□□ 17.1
TPR-205ENST00000474852 PTPN23Q9H3S7 1636 aa22.7■■□□□ 1.23
TPR-205ENST00000474852 CHIC2Q9UKJ5 165 aa22.7■■□□□ 1.22
TPR-205ENST00000474852 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
TPR-205ENST00000474852 FMN1Q68DA7 1419 aa22.69■■□□□ 1.22
TPR-205ENST00000474852 NAIPQ13075 1403 aa22.68■■□□□ 1.22
TPR-205ENST00000474852 HSPA5P11021 654 aaKnown RBP22.67■■□□□ 1.22
TPR-205ENST00000474852 WASHC2AQ641Q2 1341 aa22.67■■□□□ 1.22
TPR-205ENST00000474852 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
TPR-205ENST00000474852 SNAPC4Q5SXM2 1469 aa22.65■■□□□ 1.22
TPR-205ENST00000474852 CDK11AQ9UQ88 783 aaPredicted RBP22.65■■□□□ 1.22
TPR-205ENST00000474852 NCOA2Q15596 1464 aa22.64■■□□□ 1.21
TPR-205ENST00000474852 CCDC184Q52MB2 194 aa22.64■■□□□ 1.21
TPR-205ENST00000474852 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
TPR-205ENST00000474852 CTTNBP2Q8WZ74 1663 aa22.63■■□□□ 1.21
TPR-205ENST00000474852 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
TPR-205ENST00000474852 MYOM3Q5VTT5 1437 aa22.61■■□□□ 1.21
TPR-205ENST00000474852 TOPBP1Q92547 1522 aa22.6■■□□□ 1.21
TPR-205ENST00000474852 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
TPR-205ENST00000474852 FAM9BQ8IZU0 186 aa22.58■■□□□ 1.21
TPR-205ENST00000474852 LRRIQ1Q96JM4 1722 aa22.57■■□□□ 1.2
TPR-205ENST00000474852 FOXD1Q16676 465 aa22.57■■□□□ 1.2
TPR-205ENST00000474852 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
TPR-205ENST00000474852 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
TPR-205ENST00000474852 NESP48681 1621 aa22.56■■□□□ 1.2
TPR-205ENST00000474852 CUL7Q14999 1698 aa22.55■■□□□ 1.2
TPR-205ENST00000474852 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
TPR-205ENST00000474852 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
TPR-205ENST00000474852 ARID3CA6NKF2 412 aa22.54■■□□□ 1.2
TPR-205ENST00000474852 C11orf95C9JLR9 678 aaPredicted RBP22.51■■□□□ 1.19
TPR-205ENST00000474852 CNGB1Q14028 1251 aaPredicted RBP22.5■■□□□ 1.19
TPR-205ENST00000474852 SUPT6HQ7KZ85 1726 aaKnown RBP22.5■■□□□ 1.19
TPR-205ENST00000474852 FANCIQ9NVI1 1328 aa22.5■■□□□ 1.19
TPR-205ENST00000474852 L3MBTL2Q969R5 705 aa22.5■■□□□ 1.19
TPR-205ENST00000474852 B4GALNT3Q6L9W6 998 aa22.49■■□□□ 1.19
TPR-205ENST00000474852 MRS2Q9HD23 443 aa22.49■■□□□ 1.19
TPR-205ENST00000474852 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
TPR-205ENST00000474852 DENND4BO75064 1496 aaPredicted RBP22.48■■□□□ 1.19
TPR-205ENST00000474852 CNTLNQ9NXG0 1405 aa22.47■■□□□ 1.19
TPR-205ENST00000474852 PPP4R2Q9NY27 417 aa22.47■■□□□ 1.19
TPR-205ENST00000474852 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
TPR-205ENST00000474852 MPHOSPH9Q99550 1183 aa22.45■■□□□ 1.19
TPR-205ENST00000474852 KDM6BO15054 1643 aa22.45■■□□□ 1.18
TPR-205ENST00000474852 MAGI3Q5TCQ9 1506 aa22.45■■□□□ 1.18
TPR-205ENST00000474852 EHBP1L1Q8N3D4 1523 aa22.45■■□□□ 1.18
TPR-205ENST00000474852 SAMD9Q5K651 1589 aa22.44■■□□□ 1.18
TPR-205ENST00000474852 UGGT2Q9NYU1 1516 aa22.42■■□□□ 1.18
TPR-205ENST00000474852 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
TPR-205ENST00000474852 SENP3-EIF4A1A0A087X0R7 540 aa22.38■■□□□ 1.17
TPR-205ENST00000474852 NBPF8Q3BBV2 869 aa22.38■■□□□ 1.17
TPR-205ENST00000474852 HECW1Q76N89 1606 aa22.37■■□□□ 1.17
TPR-205ENST00000474852 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
TPR-205ENST00000474852 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
TPR-205ENST00000474852 ERICH6BQ5W0A0 696 aa22.35■■□□□ 1.17
TPR-205ENST00000474852 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
TPR-205ENST00000474852 NCOA1Q15788 1441 aa22.35■■□□□ 1.17
TPR-205ENST00000474852 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
TPR-205ENST00000474852 GCC2Q8IWJ2 1684 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms