RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
TPR-205ENST00000474852 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
TPR-205ENST00000474852 SUPT5HO00267 1087 aaKnown RBP28.05■■■□□ 2.08
TPR-205ENST00000474852 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
TPR-205ENST00000474852 MYO15BQ96JP2 1530 aa27.34■■□□□ 1.97
TPR-205ENST00000474852 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
TPR-205ENST00000474852 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
TPR-205ENST00000474852 HRCP23327 699 aa27.23■■□□□ 1.95
TPR-205ENST00000474852 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
TPR-205ENST00000474852 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
TPR-205ENST00000474852 PPARGC1BQ86YN6 1023 aaKnown RBP26.85■■□□□ 1.89
TPR-205ENST00000474852 LOC105371045A0A1W2PR82 267 aa26.69■■□□□ 1.86
TPR-205ENST00000474852 DCAF1Q9Y4B6 1507 aa26.48■■□□□ 1.83
TPR-205ENST00000474852 TRIM26Q12899 539 aaPredicted RBP26.25■■□□□ 1.79
TPR-205ENST00000474852 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
TPR-205ENST00000474852 ABCC9O60706 1549 aa25.96■■□□□ 1.75
TPR-205ENST00000474852 EHMT2Q96KQ7 1210 aa25.95■■□□□ 1.74
TPR-205ENST00000474852 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
TPR-205ENST00000474852 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
TPR-205ENST00000474852 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
TPR-205ENST00000474852 ZEB1P37275 1124 aaPredicted RBP25.77■■□□□ 1.72
TPR-205ENST00000474852 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
TPR-205ENST00000474852 PELP1Q8IZL8 1130 aaKnown RBP25.68■■□□□ 1.7
TPR-205ENST00000474852 SCAF1Q9H7N4 1312 aaKnown RBP25.48■■□□□ 1.67
TPR-205ENST00000474852 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
TPR-205ENST00000474852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.33■■□□□ 1.65
TPR-205ENST00000474852 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
TPR-205ENST00000474852 CCER1Q8TC90 406 aaPredicted RBP25.24■■□□□ 1.63
TPR-205ENST00000474852 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.62
TPR-205ENST00000474852 WIZO95785 1651 aa25.2■■□□□ 1.62
TPR-205ENST00000474852 NEUROD1Q13562 356 aa25.02■■□□□ 1.6
TPR-205ENST00000474852 NACADO15069 1562 aa25.01■■□□□ 1.59
TPR-205ENST00000474852 ACIN1Q9UKV3 1341 aaKnown RBP25■■□□□ 1.59
TPR-205ENST00000474852 DIEXFQ68CQ4 756 aaKnown RBP24.95■■□□□ 1.58
TPR-205ENST00000474852 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
TPR-205ENST00000474852 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
TPR-205ENST00000474852 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
TPR-205ENST00000474852 GTF3C3Q9Y5Q9 886 aa24.84■■□□□ 1.57
TPR-205ENST00000474852 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
TPR-205ENST00000474852 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
TPR-205ENST00000474852 CENPBP07199 599 aaPredicted RBP24.77■■□□□ 1.56
TPR-205ENST00000474852 SOGA1O94964 1423 aa24.74■■□□□ 1.55
TPR-205ENST00000474852 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
TPR-205ENST00000474852 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
TPR-205ENST00000474852 TOP2AP11388 1531 aaKnown RBP24.64■■□□□ 1.54
TPR-205ENST00000474852 RUSC2Q8N2Y8 1516 aa24.62■■□□□ 1.53
TPR-205ENST00000474852 YTHDC1Q96MU7 727 aaKnown RBP24.61■■□□□ 1.53
TPR-205ENST00000474852 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
TPR-205ENST00000474852 MYT1Q01538 1121 aa24.59■■□□□ 1.53
TPR-205ENST00000474852 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
TPR-205ENST00000474852 SMARCA2P51531 1590 aa24.58■■□□□ 1.53
TPR-205ENST00000474852 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
TPR-205ENST00000474852 SMARCA4P51532 1647 aa24.54■■□□□ 1.52
TPR-205ENST00000474852 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
TPR-205ENST00000474852 EEA1Q15075 1411 aa24.41■■□□□ 1.5
TPR-205ENST00000474852 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
TPR-205ENST00000474852 MIER1Q8N108 512 aa24.38■■□□□ 1.49
TPR-205ENST00000474852 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
TPR-205ENST00000474852 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
TPR-205ENST00000474852 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
TPR-205ENST00000474852 CLIP1P30622 1438 aa24.23■■□□□ 1.47
TPR-205ENST00000474852 APLP2Q06481 763 aa24.2■■□□□ 1.47
TPR-205ENST00000474852 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.46
TPR-205ENST00000474852 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
TPR-205ENST00000474852 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
TPR-205ENST00000474852 KIF21BO75037 1637 aa24.08■■□□□ 1.45
TPR-205ENST00000474852 RAPGEF2Q9Y4G8 1499 aa24.08■■□□□ 1.44
TPR-205ENST00000474852 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
TPR-205ENST00000474852 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
TPR-205ENST00000474852 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
TPR-205ENST00000474852 DHX57Q6P158 1386 aaKnown RBP23.86■■□□□ 1.41
TPR-205ENST00000474852 KANK4Q5T7N3 995 aaPredicted RBP23.85■■□□□ 1.41
TPR-205ENST00000474852 ATAD2BQ9ULI0 1458 aa23.83■■□□□ 1.41
TPR-205ENST00000474852 ITGAEP38570 1179 aa23.77■■□□□ 1.4
TPR-205ENST00000474852 SUPT16HQ9Y5B9 1047 aaKnown RBP23.74■■□□□ 1.39
TPR-205ENST00000474852 CLSPNQ9HAW4 1339 aa23.74■■□□□ 1.39
TPR-205ENST00000474852 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
TPR-205ENST00000474852 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
TPR-205ENST00000474852 PRXQ9BXM0 1461 aa23.64■■□□□ 1.37
TPR-205ENST00000474852 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
TPR-205ENST00000474852 KCNH8Q96L42 1107 aa23.6■■□□□ 1.37
TPR-205ENST00000474852 RRBP1Q9P2E9 1410 aaKnown RBP23.57■■□□□ 1.36
TPR-205ENST00000474852 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
TPR-205ENST00000474852 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
TPR-205ENST00000474852 KIF27Q86VH2 1401 aa23.48■■□□□ 1.35
TPR-205ENST00000474852 CUX1P39880 1505 aa23.47■■□□□ 1.35
TPR-205ENST00000474852 BCANQ96GW7 911 aa23.47■■□□□ 1.35
TPR-205ENST00000474852 TSHZ2Q9NRE2 1034 aa23.47■■□□□ 1.35
TPR-205ENST00000474852 ARHGAP35Q9NRY4 1499 aa23.46■■□□□ 1.35
TPR-205ENST00000474852 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.35
TPR-205ENST00000474852 CUX2O14529 1486 aa23.42■■□□□ 1.34
TPR-205ENST00000474852 DDX10Q13206 875 aaKnown RBP23.4■■□□□ 1.34
TPR-205ENST00000474852 SIN3AQ96ST3 1273 aa23.37■■□□□ 1.33
TPR-205ENST00000474852 MAPKBP1O60336 1514 aa23.36■■□□□ 1.33
TPR-205ENST00000474852 FAM50AQ14320 339 aaKnown RBP23.35■■□□□ 1.33
TPR-205ENST00000474852 HIRIP3Q9BW71 556 aaPredicted RBP23.34■■□□□ 1.33
TPR-205ENST00000474852 ANP32EQ9BTT0 268 aa23.31■■□□□ 1.32
TPR-205ENST00000474852 FKBP8Q14318 412 aa23.3■■□□□ 1.32
TPR-205ENST00000474852 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
TPR-205ENST00000474852 BCL11AQ9H165 835 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms