RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
PCCB-211ENST00000473073 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
PCCB-211ENST00000473073 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
PCCB-211ENST00000473073 CEP170Q5SW79 1584 aa19.98■□□□□ 0.79
PCCB-211ENST00000473073 CHD1O14646 1710 aa19.98■□□□□ 0.79
PCCB-211ENST00000473073 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
PCCB-211ENST00000473073 IQGAP2Q13576 1575 aa19.95■□□□□ 0.78
PCCB-211ENST00000473073 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
PCCB-211ENST00000473073 NUP160Q12769 1436 aa19.9■□□□□ 0.78
PCCB-211ENST00000473073 KIAA0586Q9BVV6 1533 aa19.9■□□□□ 0.78
PCCB-211ENST00000473073 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
PCCB-211ENST00000473073 FHOD3Q2V2M9 1422 aa19.88■□□□□ 0.77
PCCB-211ENST00000473073 EFCAB5A4FU69 1503 aa19.87■□□□□ 0.77
PCCB-211ENST00000473073 SAMD9Q5K651 1589 aa19.86■□□□□ 0.77
PCCB-211ENST00000473073 PPARGC1BQ86YN6 1023 aaKnown RBP19.85■□□□□ 0.77
PCCB-211ENST00000473073 UGGT2Q9NYU1 1516 aa19.81■□□□□ 0.76
PCCB-211ENST00000473073 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
PCCB-211ENST00000473073 KIAA0556O60303 1618 aa19.76■□□□□ 0.75
PCCB-211ENST00000473073 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
PCCB-211ENST00000473073 JPH4Q96JJ6 628 aa19.75■□□□□ 0.75
PCCB-211ENST00000473073 PCF11O94913 1555 aaKnown RBP19.74■□□□□ 0.75
PCCB-211ENST00000473073 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
PCCB-211ENST00000473073 FMN1Q68DA7 1419 aa19.69■□□□□ 0.74
PCCB-211ENST00000473073 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
PCCB-211ENST00000473073 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
PCCB-211ENST00000473073 APLP2Q06481 763 aa19.66■□□□□ 0.74
PCCB-211ENST00000473073 SHROOM2Q13796 1616 aa19.66■□□□□ 0.74
PCCB-211ENST00000473073 CARMIL2Q6F5E8 1435 aa19.65■□□□□ 0.74
PCCB-211ENST00000473073 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
PCCB-211ENST00000473073 ERCC6L2Q5T890 1561 aa19.63■□□□□ 0.73
PCCB-211ENST00000473073 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
PCCB-211ENST00000473073 LRRIQ1Q96JM4 1722 aa19.6■□□□□ 0.73
PCCB-211ENST00000473073 KANK4Q5T7N3 995 aaPredicted RBP19.59■□□□□ 0.73
PCCB-211ENST00000473073 TIAM1Q13009 1591 aa19.58■□□□□ 0.73
PCCB-211ENST00000473073 OSCARQ8IYS5 282 aa19.58■□□□□ 0.73
PCCB-211ENST00000473073 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
PCCB-211ENST00000473073 CFAP43Q8NDM7 1665 aa19.56■□□□□ 0.72
PCCB-211ENST00000473073 PLB1Q6P1J6 1458 aa19.55■□□□□ 0.72
PCCB-211ENST00000473073 HECW1Q76N89 1606 aa19.54■□□□□ 0.72
PCCB-211ENST00000473073 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
PCCB-211ENST00000473073 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
PCCB-211ENST00000473073 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
PCCB-211ENST00000473073 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
PCCB-211ENST00000473073 CDK13Q14004 1512 aaKnown RBP19.5■□□□□ 0.71
PCCB-211ENST00000473073 PTPRGP23470 1445 aa19.5■□□□□ 0.71
PCCB-211ENST00000473073 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
PCCB-211ENST00000473073 LRRC9Q6ZRR7 1453 aa19.49■□□□□ 0.71
PCCB-211ENST00000473073 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
PCCB-211ENST00000473073 ABCA8O94911 1581 aa19.47■□□□□ 0.71
PCCB-211ENST00000473073 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
PCCB-211ENST00000473073 MAGI3Q5TCQ9 1506 aa19.43■□□□□ 0.7
PCCB-211ENST00000473073 MTUS2Q5JR59 1369 aa19.41■□□□□ 0.7
PCCB-211ENST00000473073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
PCCB-211ENST00000473073 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
PCCB-211ENST00000473073 UACAQ9BZF9 1416 aa19.38■□□□□ 0.69
PCCB-211ENST00000473073 EHBP1L1Q8N3D4 1523 aa19.36■□□□□ 0.69
PCCB-211ENST00000473073 ABCC2Q92887 1545 aa19.34■□□□□ 0.69
PCCB-211ENST00000473073 ATP10BO94823 1461 aa19.34■□□□□ 0.69
PCCB-211ENST00000473073 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.68
PCCB-211ENST00000473073 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
PCCB-211ENST00000473073 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
PCCB-211ENST00000473073 NCOA2Q15596 1464 aa19.29■□□□□ 0.68
PCCB-211ENST00000473073 ADCY10Q96PN6 1610 aa19.28■□□□□ 0.68
PCCB-211ENST00000473073 UHRF1BP1LA0JNW5 1464 aa19.26■□□□□ 0.67
PCCB-211ENST00000473073 CDK11AQ9UQ88 783 aaPredicted RBP19.26■□□□□ 0.67
PCCB-211ENST00000473073 ZCCHC11Q5TAX3 1644 aaKnown RBP19.25■□□□□ 0.67
PCCB-211ENST00000473073 TROQ12816 1431 aaPredicted RBP19.25■□□□□ 0.67
PCCB-211ENST00000473073 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
PCCB-211ENST00000473073 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
PCCB-211ENST00000473073 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
PCCB-211ENST00000473073 RRBP1Q9P2E9 1410 aaKnown RBP19.24■□□□□ 0.67
PCCB-211ENST00000473073 KIF14Q15058 1648 aa19.24■□□□□ 0.67
PCCB-211ENST00000473073 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
PCCB-211ENST00000473073 PLEKHD1A6NEE1 506 aa19.21■□□□□ 0.67
PCCB-211ENST00000473073 KDM5BQ9UGL1 1544 aa19.21■□□□□ 0.67
PCCB-211ENST00000473073 MYOM3Q5VTT5 1437 aa19.18■□□□□ 0.66
PCCB-211ENST00000473073 FGD6Q6ZV73 1430 aa19.18■□□□□ 0.66
PCCB-211ENST00000473073 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
PCCB-211ENST00000473073 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
PCCB-211ENST00000473073 ITGAEP38570 1179 aa19.15■□□□□ 0.66
PCCB-211ENST00000473073 KCNH8Q96L42 1107 aa19.12■□□□□ 0.65
PCCB-211ENST00000473073 PTPN23Q9H3S7 1636 aa19.11■□□□□ 0.65
PCCB-211ENST00000473073 ABCC10Q5T3U5 1492 aa19.11■□□□□ 0.65
PCCB-211ENST00000473073 TTC37Q6PGP7 1564 aa19.08■□□□□ 0.64
PCCB-211ENST00000473073 GPATCH8Q9UKJ3 1502 aaKnown RBP19.08■□□□□ 0.64
PCCB-211ENST00000473073 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.64
PCCB-211ENST00000473073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCCB-211ENST00000473073 ITSN2Q9NZM3 1697 aa19.07■□□□□ 0.64
PCCB-211ENST00000473073 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
PCCB-211ENST00000473073 WDR7Q9Y4E6 1490 aa19.06■□□□□ 0.64
PCCB-211ENST00000473073 ASXL2Q76L83 1435 aa19.06■□□□□ 0.64
PCCB-211ENST00000473073 MIA2Q96PC5 1412 aa19.05■□□□□ 0.64
PCCB-211ENST00000473073 ZNF644Q9H582 1327 aaPredicted RBP19.05■□□□□ 0.64
PCCB-211ENST00000473073 TCOF1Q13428 1488 aaKnown RBP19.03■□□□□ 0.64
PCCB-211ENST00000473073 CFDP1Q9UEE9 299 aaPredicted RBP19.03■□□□□ 0.64
PCCB-211ENST00000473073 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
PCCB-211ENST00000473073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.02■□□□□ 0.64
PCCB-211ENST00000473073 PREX2Q70Z35 1606 aa19■□□□□ 0.63
PCCB-211ENST00000473073 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
PCCB-211ENST00000473073 CAMSAP2Q08AD1 1489 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms