RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
PCCB-211ENST00000473073 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
PCCB-211ENST00000473073 ZCCHC6Q5VYS8 1495 aaKnown RBP24.36■■□□□ 1.49
PCCB-211ENST00000473073 ABCC9O60706 1549 aa24.32■■□□□ 1.48
PCCB-211ENST00000473073 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
PCCB-211ENST00000473073 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
PCCB-211ENST00000473073 MYO15BQ96JP2 1530 aa23.72■■□□□ 1.39
PCCB-211ENST00000473073 NACADO15069 1562 aa23.69■■□□□ 1.38
PCCB-211ENST00000473073 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
PCCB-211ENST00000473073 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
PCCB-211ENST00000473073 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
PCCB-211ENST00000473073 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
PCCB-211ENST00000473073 BICRAQ9NZM4 1560 aa22.9■■□□□ 1.26
PCCB-211ENST00000473073 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
PCCB-211ENST00000473073 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
PCCB-211ENST00000473073 SUPT5HO00267 1087 aaKnown RBP22.64■■□□□ 1.21
PCCB-211ENST00000473073 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
PCCB-211ENST00000473073 RSF1Q96T23 1441 aaPredicted RBP22.46■■□□□ 1.19
PCCB-211ENST00000473073 BAZ1AQ9NRL2 1556 aaPredicted RBP22.44■■□□□ 1.18
PCCB-211ENST00000473073 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
PCCB-211ENST00000473073 WIZO95785 1651 aa22.3■■□□□ 1.16
PCCB-211ENST00000473073 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
PCCB-211ENST00000473073 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
PCCB-211ENST00000473073 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
PCCB-211ENST00000473073 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
PCCB-211ENST00000473073 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
PCCB-211ENST00000473073 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
PCCB-211ENST00000473073 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
PCCB-211ENST00000473073 NCAPD3P42695 1498 aa21.87■■□□□ 1.09
PCCB-211ENST00000473073 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
PCCB-211ENST00000473073 CCDC88BA6NC98 1476 aa21.8■■□□□ 1.08
PCCB-211ENST00000473073 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
PCCB-211ENST00000473073 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
PCCB-211ENST00000473073 CFTRP13569 1480 aa21.34■■□□□ 1.01
PCCB-211ENST00000473073 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
PCCB-211ENST00000473073 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
PCCB-211ENST00000473073 NESP48681 1621 aa21.29■■□□□ 1
PCCB-211ENST00000473073 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
PCCB-211ENST00000473073 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
PCCB-211ENST00000473073 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
PCCB-211ENST00000473073 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
PCCB-211ENST00000473073 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
PCCB-211ENST00000473073 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
PCCB-211ENST00000473073 CUX1P39880 1505 aa21.03■□□□□ 0.96
PCCB-211ENST00000473073 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.96
PCCB-211ENST00000473073 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
PCCB-211ENST00000473073 TOP2BQ02880 1626 aa21■□□□□ 0.95
PCCB-211ENST00000473073 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
PCCB-211ENST00000473073 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
PCCB-211ENST00000473073 FAM9AQ8IZU1 332 aaPredicted RBP20.94■□□□□ 0.94
PCCB-211ENST00000473073 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
PCCB-211ENST00000473073 SOGA1O94964 1423 aa20.87■□□□□ 0.93
PCCB-211ENST00000473073 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
PCCB-211ENST00000473073 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
PCCB-211ENST00000473073 ERCC6Q03468 1493 aa20.84■□□□□ 0.93
PCCB-211ENST00000473073 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.92
PCCB-211ENST00000473073 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
PCCB-211ENST00000473073 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
PCCB-211ENST00000473073 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
PCCB-211ENST00000473073 LOC105371045A0A1W2PR82 267 aa20.74■□□□□ 0.91
PCCB-211ENST00000473073 EHMT2Q96KQ7 1210 aa20.73■□□□□ 0.91
PCCB-211ENST00000473073 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
PCCB-211ENST00000473073 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
PCCB-211ENST00000473073 WDR62O43379 1518 aa20.68■□□□□ 0.9
PCCB-211ENST00000473073 EEA1Q15075 1411 aa20.66■□□□□ 0.9
PCCB-211ENST00000473073 CUX2O14529 1486 aa20.65■□□□□ 0.9
PCCB-211ENST00000473073 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
PCCB-211ENST00000473073 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
PCCB-211ENST00000473073 ABCA10Q8WWZ4 1543 aa20.6■□□□□ 0.89
PCCB-211ENST00000473073 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
PCCB-211ENST00000473073 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
PCCB-211ENST00000473073 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
PCCB-211ENST00000473073 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
PCCB-211ENST00000473073 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
PCCB-211ENST00000473073 KIF21BO75037 1637 aa20.46■□□□□ 0.87
PCCB-211ENST00000473073 IGF1RP08069 1367 aa20.46■□□□□ 0.87
PCCB-211ENST00000473073 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
PCCB-211ENST00000473073 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
PCCB-211ENST00000473073 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.862e-6■■■■□ 20.7
PCCB-211ENST00000473073 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
PCCB-211ENST00000473073 GOLGA3Q08378 1498 aa20.42■□□□□ 0.86
PCCB-211ENST00000473073 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
PCCB-211ENST00000473073 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
PCCB-211ENST00000473073 EIF4G3O43432 1585 aaKnown RBP20.37■□□□□ 0.85
PCCB-211ENST00000473073 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
PCCB-211ENST00000473073 CARMIL1Q5VZK9 1371 aa20.36■□□□□ 0.85
PCCB-211ENST00000473073 ERICH3Q5RHP9 1530 aa20.34■□□□□ 0.85
PCCB-211ENST00000473073 CUL7Q14999 1698 aa20.31■□□□□ 0.84
PCCB-211ENST00000473073 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
PCCB-211ENST00000473073 GRIN2BQ13224 1484 aa20.29■□□□□ 0.84
PCCB-211ENST00000473073 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
PCCB-211ENST00000473073 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
PCCB-211ENST00000473073 ADAMTS12P58397 1594 aa20.23■□□□□ 0.83
PCCB-211ENST00000473073 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
PCCB-211ENST00000473073 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
PCCB-211ENST00000473073 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
PCCB-211ENST00000473073 CLIP1P30622 1438 aa20.11■□□□□ 0.81
PCCB-211ENST00000473073 CTTNBP2Q8WZ74 1663 aa20.1■□□□□ 0.81
PCCB-211ENST00000473073 FBLN2P98095 1184 aa20.08■□□□□ 0.81
PCCB-211ENST00000473073 SYNJ2O15056 1496 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms