RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 EIF4G3O43432 1585 aaKnown RBP7.38□□□□□ -1.23
TM4SF1-202ENST00000472441 ABCA10Q8WWZ4 1543 aa7.38□□□□□ -1.23
TM4SF1-202ENST00000472441 ARAP1Q96P48 1450 aa7.38□□□□□ -1.23
TM4SF1-202ENST00000472441 ATP1B4Q9UN42 357 aaPredicted RBP7.38□□□□□ -1.23
TM4SF1-202ENST00000472441 KANK4Q5T7N3 995 aaPredicted RBP7.37□□□□□ -1.23
TM4SF1-202ENST00000472441 ARHGAP35Q9NRY4 1499 aa7.36□□□□□ -1.23
TM4SF1-202ENST00000472441 CUL7Q14999 1698 aa7.34□□□□□ -1.23
TM4SF1-202ENST00000472441 PHF23Q9BUL5 403 aaPredicted RBP7.34□□□□□ -1.24
TM4SF1-202ENST00000472441 GAPVD1Q14C86 1478 aa7.32□□□□□ -1.24
TM4SF1-202ENST00000472441 ADAMTS12P58397 1594 aa7.31□□□□□ -1.24
TM4SF1-202ENST00000472441 ITGAEP38570 1179 aa7.31□□□□□ -1.24
TM4SF1-202ENST00000472441 MAGI1Q96QZ7 1491 aaPredicted RBP7.3□□□□□ -1.24
TM4SF1-202ENST00000472441 FHOD3Q2V2M9 1422 aa7.29□□□□□ -1.24
TM4SF1-202ENST00000472441 AQRO60306 1485 aaKnown RBP eCLIP7.29□□□□□ -1.246e-7■■■■□ 22.7
TM4SF1-202ENST00000472441 CHD1O14646 1710 aa7.29□□□□□ -1.24
TM4SF1-202ENST00000472441 ARID3CA6NKF2 412 aa7.28□□□□□ -1.24
TM4SF1-202ENST00000472441 GRIN2BQ13224 1484 aa7.27□□□□□ -1.25
TM4SF1-202ENST00000472441 FHAD1B1AJZ9 1412 aa7.26□□□□□ -1.25
TM4SF1-202ENST00000472441 SHROOM2Q13796 1616 aa7.25□□□□□ -1.25
TM4SF1-202ENST00000472441 CLASP1Q7Z460 1538 aa7.25□□□□□ -1.25
TM4SF1-202ENST00000472441 CTTNBP2Q8WZ74 1663 aa7.25□□□□□ -1.25
TM4SF1-202ENST00000472441 FAM50AQ14320 339 aaKnown RBP7.24□□□□□ -1.25
TM4SF1-202ENST00000472441 ZNF608Q9ULD9 1512 aaPredicted RBP7.24□□□□□ -1.25
TM4SF1-202ENST00000472441 CCNB3Q8WWL7 1395 aa7.24□□□□□ -1.25
TM4SF1-202ENST00000472441 TIAM1Q13009 1591 aa7.24□□□□□ -1.25
TM4SF1-202ENST00000472441 PCF11O94913 1555 aaKnown RBP7.23□□□□□ -1.25
TM4SF1-202ENST00000472441 FBLN2P98095 1184 aa7.23□□□□□ -1.25
TM4SF1-202ENST00000472441 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
TM4SF1-202ENST00000472441 LRRC9Q6ZRR7 1453 aa7.22□□□□□ -1.25
TM4SF1-202ENST00000472441 EFCAB5A4FU69 1503 aa7.22□□□□□ -1.25
TM4SF1-202ENST00000472441 RRBP1Q9P2E9 1410 aaKnown RBP7.22□□□□□ -1.25
TM4SF1-202ENST00000472441 FMN1Q68DA7 1419 aa7.21□□□□□ -1.25
TM4SF1-202ENST00000472441 PHLDB1Q86UU1 1377 aa7.21□□□□□ -1.26
TM4SF1-202ENST00000472441 CASKIN1Q8WXD9 1431 aa7.2□□□□□ -1.26
TM4SF1-202ENST00000472441 SNAPC4Q5SXM2 1469 aa7.2□□□□□ -1.26
TM4SF1-202ENST00000472441 MAP3K1Q13233 1512 aa7.2□□□□□ -1.26
TM4SF1-202ENST00000472441 CHMP7Q8WUX9 453 aaPredicted RBP7.19□□□□□ -1.26
TM4SF1-202ENST00000472441 MTUS2Q5JR59 1369 aa7.19□□□□□ -1.26
TM4SF1-202ENST00000472441 FYCO1Q9BQS8 1478 aa7.19□□□□□ -1.26
TM4SF1-202ENST00000472441 NUP160Q12769 1436 aa7.18□□□□□ -1.26
TM4SF1-202ENST00000472441 CEP170Q5SW79 1584 aa7.17□□□□□ -1.26
TM4SF1-202ENST00000472441 GRIN2AQ12879 1464 aa7.17□□□□□ -1.26
TM4SF1-202ENST00000472441 DHX57Q6P158 1386 aaKnown RBP7.17□□□□□ -1.26
TM4SF1-202ENST00000472441 CFAP43Q8NDM7 1665 aa7.16□□□□□ -1.26
TM4SF1-202ENST00000472441 DIEXFQ68CQ4 756 aaKnown RBP7.16□□□□□ -1.26
TM4SF1-202ENST00000472441 IQGAP2Q13576 1575 aa7.16□□□□□ -1.26
TM4SF1-202ENST00000472441 SAMD9Q5K651 1589 aa7.16□□□□□ -1.26
TM4SF1-202ENST00000472441 ZNF316A6NFI3 1004 aaPredicted RBP7.15□□□□□ -1.26
TM4SF1-202ENST00000472441 RAB3GAP2Q9H2M9 1393 aa7.15□□□□□ -1.27
TM4SF1-202ENST00000472441 LRRIQ1Q96JM4 1722 aa7.13□□□□□ -1.27
TM4SF1-202ENST00000472441 SETD5Q9C0A6 1442 aa7.13□□□□□ -1.27
TM4SF1-202ENST00000472441 KIAA0586Q9BVV6 1533 aa7.12□□□□□ -1.27
TM4SF1-202ENST00000472441 UGGT2Q9NYU1 1516 aa7.12□□□□□ -1.27
TM4SF1-202ENST00000472441 FGD6Q6ZV73 1430 aa7.11□□□□□ -1.27
TM4SF1-202ENST00000472441 CLSPNQ9HAW4 1339 aa7.11□□□□□ -1.27
TM4SF1-202ENST00000472441 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
TM4SF1-202ENST00000472441 JPH4Q96JJ6 628 aa7.11□□□□□ -1.27
TM4SF1-202ENST00000472441 NCOA2Q15596 1464 aa7.11□□□□□ -1.27
TM4SF1-202ENST00000472441 CHIC2Q9UKJ5 165 aa7.11□□□□□ -1.27
TM4SF1-202ENST00000472441 CDK13Q14004 1512 aaKnown RBP7.11□□□□□ -1.27
TM4SF1-202ENST00000472441 EPRSP07814 1512 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-202ENST00000472441 RIMBP3CA6NJZ7 1639 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 RIMBP3BA6NNM3 1639 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 RIMBP3Q9UFD9 1639 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 MAGI3Q5TCQ9 1506 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 DISP1Q96F81 1524 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 SIN3AQ96ST3 1273 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 HECW1Q76N89 1606 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 MYOM3Q5VTT5 1437 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 CCDC18Q5T9S5 1454 aa7.09□□□□□ -1.27
TM4SF1-202ENST00000472441 SUPT6HQ7KZ85 1726 aaKnown RBP7.08□□□□□ -1.28
TM4SF1-202ENST00000472441 EHBP1L1Q8N3D4 1523 aa7.08□□□□□ -1.28
TM4SF1-202ENST00000472441 RRP7BPQ9NSQ0 103 aa7.08□□□□□ -1.28
TM4SF1-202ENST00000472441 KIAA0556O60303 1618 aa7.08□□□□□ -1.28
TM4SF1-202ENST00000472441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.07□□□□□ -1.28
TM4SF1-202ENST00000472441 CDK11AQ9UQ88 783 aaPredicted RBP7.07□□□□□ -1.28
TM4SF1-202ENST00000472441 PTPRKQ15262 1439 aa7.07□□□□□ -1.28
TM4SF1-202ENST00000472441 CARMIL2Q6F5E8 1435 aa7.06□□□□□ -1.28
TM4SF1-202ENST00000472441 PLB1Q6P1J6 1458 aa7.05□□□□□ -1.28
TM4SF1-202ENST00000472441 PTPN23Q9H3S7 1636 aa7.05□□□□□ -1.28
TM4SF1-202ENST00000472441 NUP153P49790 1475 aaKnown RBP7.05□□□□□ -1.28
TM4SF1-202ENST00000472441 TRIM52Q96A61 297 aa7.05□□□□□ -1.28
TM4SF1-202ENST00000472441 ZNF777Q9ULD5 760 aaPredicted RBP7.05□□□□□ -1.28
TM4SF1-202ENST00000472441 ARHGEF11O15085 1522 aa7.04□□□□□ -1.28
TM4SF1-202ENST00000472441 MAPKBP1O60336 1514 aa7.04□□□□□ -1.28
TM4SF1-202ENST00000472441 RAPGEF6Q8TEU7 1601 aa7.04□□□□□ -1.28
TM4SF1-202ENST00000472441 ZNF644Q9H582 1327 aaPredicted RBP7.04□□□□□ -1.28
TM4SF1-202ENST00000472441 SENP3Q9H4L4 574 aaPredicted RBP7.04□□□□□ -1.28
TM4SF1-202ENST00000472441 PRG4Q92954 1404 aaPredicted RBP7.03□□□□□ -1.28
TM4SF1-202ENST00000472441 MIER1Q8N108 512 aa7.03□□□□□ -1.28
TM4SF1-202ENST00000472441 UHRF1BP1LA0JNW5 1464 aa7.02□□□□□ -1.29
TM4SF1-202ENST00000472441 PLEKHD1A6NEE1 506 aa7.02□□□□□ -1.29
TM4SF1-202ENST00000472441 YTHDC1Q96MU7 727 aaKnown RBP7.02□□□□□ -1.29
TM4SF1-202ENST00000472441 CFDP1Q9UEE9 299 aaPredicted RBP7.02□□□□□ -1.29
TM4SF1-202ENST00000472441 HFM1A2PYH4 1435 aa7.02□□□□□ -1.29
TM4SF1-202ENST00000472441 NAIPQ13075 1403 aa7.02□□□□□ -1.29
TM4SF1-202ENST00000472441 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
TM4SF1-202ENST00000472441 ABCA8O94911 1581 aa7□□□□□ -1.29
TM4SF1-202ENST00000472441 PTPRGP23470 1445 aa7□□□□□ -1.29
TM4SF1-202ENST00000472441 TROQ12816 1431 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms