RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
RRP1-202ENST00000471909 CTTNBP2Q8WZ74 1663 aa26.11■■□□□ 1.77
RRP1-202ENST00000471909 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
RRP1-202ENST00000471909 MAP3K1Q13233 1512 aa26.09■■□□□ 1.77
RRP1-202ENST00000471909 EFCAB5A4FU69 1503 aa26.09■■□□□ 1.77
RRP1-202ENST00000471909 FHOD3Q2V2M9 1422 aa26.08■■□□□ 1.77
RRP1-202ENST00000471909 TIAM1Q13009 1591 aa26.07■■□□□ 1.76
RRP1-202ENST00000471909 RRBP1Q9P2E9 1410 aaKnown RBP26.06■■□□□ 1.76
RRP1-202ENST00000471909 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
RRP1-202ENST00000471909 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.766e-7■■■■■ 34.6
RRP1-202ENST00000471909 WDR62O43379 1518 aa25.99■■□□□ 1.75
RRP1-202ENST00000471909 LRRC9Q6ZRR7 1453 aa25.98■■□□□ 1.75
RRP1-202ENST00000471909 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
RRP1-202ENST00000471909 CCNB3Q8WWL7 1395 aa25.96■■□□□ 1.75
RRP1-202ENST00000471909 FYCO1Q9BQS8 1478 aa25.94■■□□□ 1.74
RRP1-202ENST00000471909 CASKIN1Q8WXD9 1431 aa25.94■■□□□ 1.74
RRP1-202ENST00000471909 IFT140Q96RY7 1462 aa25.94■■□□□ 1.74
RRP1-202ENST00000471909 ATP1B4Q9UN42 357 aaPredicted RBP25.92■■□□□ 1.74
RRP1-202ENST00000471909 CFAP43Q8NDM7 1665 aa25.92■■□□□ 1.74
RRP1-202ENST00000471909 SAMD9Q5K651 1589 aa25.92■■□□□ 1.74
RRP1-202ENST00000471909 ACIN1Q9UKV3 1341 aaKnown RBP25.91■■□□□ 1.74
RRP1-202ENST00000471909 FMN1Q68DA7 1419 aa25.91■■□□□ 1.74
RRP1-202ENST00000471909 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
RRP1-202ENST00000471909 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
RRP1-202ENST00000471909 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
RRP1-202ENST00000471909 ERCC6Q03468 1493 aa25.88■■□□□ 1.73
RRP1-202ENST00000471909 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
RRP1-202ENST00000471909 PHLDB1Q86UU1 1377 aa25.85■■□□□ 1.73
RRP1-202ENST00000471909 NEUROD1Q13562 356 aa25.8■■□□□ 1.72
RRP1-202ENST00000471909 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
RRP1-202ENST00000471909 DIEXFQ68CQ4 756 aaKnown RBP25.77■■□□□ 1.72
RRP1-202ENST00000471909 ITGAEP38570 1179 aa25.76■■□□□ 1.71
RRP1-202ENST00000471909 IQGAP2Q13576 1575 aa25.75■■□□□ 1.71
RRP1-202ENST00000471909 DHX57Q6P158 1386 aaKnown RBP25.74■■□□□ 1.71
RRP1-202ENST00000471909 CENPBP07199 599 aaPredicted RBP25.73■■□□□ 1.71
RRP1-202ENST00000471909 EIF4G3O43432 1585 aaKnown RBP25.72■■□□□ 1.71
RRP1-202ENST00000471909 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
RRP1-202ENST00000471909 LRRIQ1Q96JM4 1722 aa25.67■■□□□ 1.7
RRP1-202ENST00000471909 FAM50AQ14320 339 aaKnown RBP25.66■■□□□ 1.7
RRP1-202ENST00000471909 MTUS2Q5JR59 1369 aa25.65■■□□□ 1.7
RRP1-202ENST00000471909 UGGT2Q9NYU1 1516 aa25.63■■□□□ 1.69
RRP1-202ENST00000471909 GRIN2AQ12879 1464 aa25.62■■□□□ 1.69
RRP1-202ENST00000471909 GTF3C3Q9Y5Q9 886 aa25.62■■□□□ 1.69
RRP1-202ENST00000471909 KIAA0586Q9BVV6 1533 aa25.61■■□□□ 1.69
RRP1-202ENST00000471909 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
RRP1-202ENST00000471909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.58■■□□□ 1.695e-6■□□□□ 10.9
RRP1-202ENST00000471909 MAGI1Q96QZ7 1491 aaPredicted RBP25.58■■□□□ 1.69
RRP1-202ENST00000471909 FGD6Q6ZV73 1430 aa25.56■■□□□ 1.68
RRP1-202ENST00000471909 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
RRP1-202ENST00000471909 ZNF316A6NFI3 1004 aaPredicted RBP25.55■■□□□ 1.68
RRP1-202ENST00000471909 CCDC18Q5T9S5 1454 aa25.54■■□□□ 1.68
RRP1-202ENST00000471909 NCOA2Q15596 1464 aa25.53■■□□□ 1.68
RRP1-202ENST00000471909 HECW1Q76N89 1606 aa25.53■■□□□ 1.68
RRP1-202ENST00000471909 EHBP1L1Q8N3D4 1523 aa25.52■■□□□ 1.68
RRP1-202ENST00000471909 DISP1Q96F81 1524 aa25.52■■□□□ 1.68
RRP1-202ENST00000471909 SYNJ2O15056 1496 aa25.52■■□□□ 1.68
RRP1-202ENST00000471909 MAGI3Q5TCQ9 1506 aa25.51■■□□□ 1.67
RRP1-202ENST00000471909 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
RRP1-202ENST00000471909 EPRSP07814 1512 aaKnown RBP25.49■■□□□ 1.67
RRP1-202ENST00000471909 KIAA0556O60303 1618 aa25.49■■□□□ 1.67
RRP1-202ENST00000471909 SUPT6HQ7KZ85 1726 aaKnown RBP25.47■■□□□ 1.67
RRP1-202ENST00000471909 MYOM3Q5VTT5 1437 aa25.47■■□□□ 1.67
RRP1-202ENST00000471909 CEP170Q5SW79 1584 aa25.45■■□□□ 1.67
RRP1-202ENST00000471909 ARHGEF11O15085 1522 aa25.45■■□□□ 1.66
RRP1-202ENST00000471909 FBLN2P98095 1184 aa25.44■■□□□ 1.66
RRP1-202ENST00000471909 CDK13Q14004 1512 aaKnown RBP25.44■■□□□ 1.66
RRP1-202ENST00000471909 MAPKBP1O60336 1514 aa25.4■■□□□ 1.66
RRP1-202ENST00000471909 ARID3CA6NKF2 412 aa25.39■■□□□ 1.66
RRP1-202ENST00000471909 NUP160Q12769 1436 aa25.39■■□□□ 1.65
RRP1-202ENST00000471909 PTPRKQ15262 1439 aa25.38■■□□□ 1.65
RRP1-202ENST00000471909 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
RRP1-202ENST00000471909 PTPN23Q9H3S7 1636 aa25.32■■□□□ 1.64
RRP1-202ENST00000471909 MYT1Q01538 1121 aa25.31■■□□□ 1.64
RRP1-202ENST00000471909 RAPGEF6Q8TEU7 1601 aa25.31■■□□□ 1.64
RRP1-202ENST00000471909 JPH4Q96JJ6 628 aa25.31■■□□□ 1.64
RRP1-202ENST00000471909 HFM1A2PYH4 1435 aa25.29■■□□□ 1.64
RRP1-202ENST00000471909 TCOF1Q13428 1488 aaKnown RBP25.28■■□□□ 1.64
RRP1-202ENST00000471909 CARMIL2Q6F5E8 1435 aa25.26■■□□□ 1.63
RRP1-202ENST00000471909 MIA2Q96PC5 1412 aa25.24■■□□□ 1.63
RRP1-202ENST00000471909 PLB1Q6P1J6 1458 aa25.23■■□□□ 1.63
RRP1-202ENST00000471909 NAIPQ13075 1403 aa25.23■■□□□ 1.63
RRP1-202ENST00000471909 YTHDC1Q96MU7 727 aaKnown RBP25.21■■□□□ 1.63
RRP1-202ENST00000471909 CDK11AQ9UQ88 783 aaPredicted RBP25.19■■□□□ 1.62
RRP1-202ENST00000471909 SIN3AQ96ST3 1273 aa25.19■■□□□ 1.62
RRP1-202ENST00000471909 UACAQ9BZF9 1416 aa25.14■■□□□ 1.62
RRP1-202ENST00000471909 CHIC2Q9UKJ5 165 aa25.14■■□□□ 1.61
RRP1-202ENST00000471909 PRG4Q92954 1404 aaPredicted RBP25.13■■□□□ 1.61
RRP1-202ENST00000471909 MIER1Q8N108 512 aa25.12■■□□□ 1.61
RRP1-202ENST00000471909 TROQ12816 1431 aaPredicted RBP25.12■■□□□ 1.61
RRP1-202ENST00000471909 RRP7BPQ9NSQ0 103 aa25.11■■□□□ 1.61
RRP1-202ENST00000471909 AKNAQ7Z591 1439 aa25.08■■□□□ 1.61
RRP1-202ENST00000471909 ABCA8O94911 1581 aa25.07■■□□□ 1.6
RRP1-202ENST00000471909 TIMELESSQ9UNS1 1208 aa25.07■■□□□ 1.6
RRP1-202ENST00000471909 ZNF644Q9H582 1327 aaPredicted RBP25.05■■□□□ 1.6
RRP1-202ENST00000471909 GCC2Q8IWJ2 1684 aa25.04■■□□□ 1.6
RRP1-202ENST00000471909 CHD1O14646 1710 aa25.03■■□□□ 1.6
RRP1-202ENST00000471909 DAPK1P53355 1430 aa25.03■■□□□ 1.6
RRP1-202ENST00000471909 ABCC5O15440 1437 aa25■■□□□ 1.59
RRP1-202ENST00000471909 KIF14Q15058 1648 aa25■■□□□ 1.59
RRP1-202ENST00000471909 ATP10BO94823 1461 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms