RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 PRXQ9BXM0 1461 aa33.17■■■□□ 2.9
HDAC7-220ENST00000471235 CTTNBP2Q8WZ74 1663 aa33.15■■■□□ 2.9
HDAC7-220ENST00000471235 ERCC6L2Q5T890 1561 aa33.14■■■□□ 2.9
HDAC7-220ENST00000471235 ARAP1Q96P48 1450 aa33.14■■■□□ 2.9
HDAC7-220ENST00000471235 KIAA0586Q9BVV6 1533 aa33.13■■■□□ 2.89
HDAC7-220ENST00000471235 IQGAP2Q13576 1575 aa33.08■■■□□ 2.89
HDAC7-220ENST00000471235 CSRNP3Q8WYN3 585 aa33.04■■■□□ 2.88
HDAC7-220ENST00000471235 KIF21BO75037 1637 aa32.99■■■□□ 2.87
HDAC7-220ENST00000471235 PRG4Q92954 1404 aaPredicted RBP32.98■■■□□ 2.87
HDAC7-220ENST00000471235 FAM9AQ8IZU1 332 aaPredicted RBP32.97■■■□□ 2.87
HDAC7-220ENST00000471235 JPH4Q96JJ6 628 aa32.96■■■□□ 2.87
HDAC7-220ENST00000471235 CYB5RLQ6IPT4 315 aa32.88■■■□□ 2.85
HDAC7-220ENST00000471235 UGGT2Q9NYU1 1516 aa32.87■■■□□ 2.85
HDAC7-220ENST00000471235 KIAA0556O60303 1618 aa32.79■■■□□ 2.84
HDAC7-220ENST00000471235 DISP1Q96F81 1524 aa32.78■■■□□ 2.84
HDAC7-220ENST00000471235 CARMIL2Q6F5E8 1435 aa32.74■■■□□ 2.83
HDAC7-220ENST00000471235 GOLGA3Q08378 1498 aa32.71■■■□□ 2.83
HDAC7-220ENST00000471235 SAMD9Q5K651 1589 aa32.63■■■□□ 2.81
HDAC7-220ENST00000471235 TNIKQ9UKE5 1360 aa32.63■■■□□ 2.81
HDAC7-220ENST00000471235 ADCY10Q96PN6 1610 aa32.62■■■□□ 2.81
HDAC7-220ENST00000471235 PTPRGP23470 1445 aa32.56■■■□□ 2.8
HDAC7-220ENST00000471235 EHMT2Q96KQ7 1210 aa32.53■■■□□ 2.8
HDAC7-220ENST00000471235 TTBK1Q5TCY1 1321 aaPredicted RBP32.47■■■□□ 2.79
HDAC7-220ENST00000471235 EFCAB5A4FU69 1503 aa32.46■■■□□ 2.79
HDAC7-220ENST00000471235 UBTFP17480 764 aaKnown RBP32.44■■■□□ 2.78
HDAC7-220ENST00000471235 ABCC2Q92887 1545 aa32.42■■■□□ 2.78
HDAC7-220ENST00000471235 UHRF1BP1LA0JNW5 1464 aa32.41■■■□□ 2.78
HDAC7-220ENST00000471235 UACAQ9BZF9 1416 aa32.4■■■□□ 2.78
HDAC7-220ENST00000471235 ABCA8O94911 1581 aa32.39■■■□□ 2.78
HDAC7-220ENST00000471235 RANGAP1P46060 587 aaPredicted RBP32.35■■■□□ 2.77
HDAC7-220ENST00000471235 PLB1Q6P1J6 1458 aa32.35■■■□□ 2.77
HDAC7-220ENST00000471235 MAPKBP1O60336 1514 aa32.33■■■□□ 2.77
HDAC7-220ENST00000471235 P3H3Q8IVL6 736 aa32.33■■■□□ 2.77
HDAC7-220ENST00000471235 FHOD3Q2V2M9 1422 aa32.33■■■□□ 2.77
HDAC7-220ENST00000471235 ZCCHC11Q5TAX3 1644 aaKnown RBP32.32■■■□□ 2.76
HDAC7-220ENST00000471235 KIF13AQ9H1H9 1805 aa32.29■■■□□ 2.76
HDAC7-220ENST00000471235 RAPGEF6Q8TEU7 1601 aa32.28■■■□□ 2.76
HDAC7-220ENST00000471235 ARHGAP35Q9NRY4 1499 aa32.28■■■□□ 2.76
HDAC7-220ENST00000471235 KDM5BQ9UGL1 1544 aa32.26■■■□□ 2.75
HDAC7-220ENST00000471235 NPM1P06748 294 aaKnown RBP eCLIP32.22■■■□□ 2.75
HDAC7-220ENST00000471235 DIP2BQ9P265 1576 aa32.17■■■□□ 2.74
HDAC7-220ENST00000471235 TRHP20396 242 aaPredicted RBP32.15■■■□□ 2.74
HDAC7-220ENST00000471235 ASXL2Q76L83 1435 aa32.1■■■□□ 2.73
HDAC7-220ENST00000471235 ABCC10Q5T3U5 1492 aa32.1■■■□□ 2.73
HDAC7-220ENST00000471235 NUP153P49790 1475 aaKnown RBP32.08■■■□□ 2.73
HDAC7-220ENST00000471235 CLIP1P30622 1438 aa32.08■■■□□ 2.73
HDAC7-220ENST00000471235 FMN1Q68DA7 1419 aa32.05■■■□□ 2.72
HDAC7-220ENST00000471235 HECW1Q76N89 1606 aa32.03■■■□□ 2.72
HDAC7-220ENST00000471235 ATP10BO94823 1461 aa32.02■■■□□ 2.72
HDAC7-220ENST00000471235 CEP162Q5TB80 1403 aa32■■■□□ 2.71
HDAC7-220ENST00000471235 LRRIQ1Q96JM4 1722 aa32■■■□□ 2.71
HDAC7-220ENST00000471235 PCF11O94913 1555 aaKnown RBP32■■■□□ 2.71
HDAC7-220ENST00000471235 WDR7Q9Y4E6 1490 aa31.99■■■□□ 2.71
HDAC7-220ENST00000471235 LOC105371045A0A1W2PR82 267 aa31.99■■■□□ 2.71
HDAC7-220ENST00000471235 GLI2P10070 1586 aa31.98■■■□□ 2.71
HDAC7-220ENST00000471235 TSPOAP1O95153 1857 aa31.97■■■□□ 2.71
HDAC7-220ENST00000471235 ARID3CA6NKF2 412 aa31.95■■■□□ 2.71
HDAC7-220ENST00000471235 EPRSP07814 1512 aaKnown RBP31.95■■■□□ 2.7
HDAC7-220ENST00000471235 CDK13Q14004 1512 aaKnown RBP31.9■■■□□ 2.7
HDAC7-220ENST00000471235 MAP3K4Q9Y6R4 1608 aa31.9■■■□□ 2.7
HDAC7-220ENST00000471235 FAM69CQ0P6D2 419 aa31.9■■■□□ 2.7
HDAC7-220ENST00000471235 PPRC1Q5VV67 1664 aaKnown RBP31.89■■■□□ 2.7
HDAC7-220ENST00000471235 CFAP43Q8NDM7 1665 aa31.85■■■□□ 2.69
HDAC7-220ENST00000471235 CASKIN1Q8WXD9 1431 aa31.84■■■□□ 2.69
HDAC7-220ENST00000471235 FYCO1Q9BQS8 1478 aa31.84■■■□□ 2.69
HDAC7-220ENST00000471235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.77■■■□□ 2.68
HDAC7-220ENST00000471235 HNRNPUL2Q1KMD3 747 aaKnown RBP31.77■■■□□ 2.68
HDAC7-220ENST00000471235 ABCA9Q8IUA7 1624 aa31.77■■■□□ 2.68
HDAC7-220ENST00000471235 CCDC18Q5T9S5 1454 aa31.74■■■□□ 2.67
HDAC7-220ENST00000471235 ATP1B4Q9UN42 357 aaPredicted RBP31.74■■■□□ 2.67
HDAC7-220ENST00000471235 KCNH8Q96L42 1107 aa31.69■■■□□ 2.66
HDAC7-220ENST00000471235 TTC37Q6PGP7 1564 aa31.64■■■□□ 2.66
HDAC7-220ENST00000471235 PLEKHD1A6NEE1 506 aa31.63■■■□□ 2.65
HDAC7-220ENST00000471235 KIF14Q15058 1648 aa31.63■■■□□ 2.65
HDAC7-220ENST00000471235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.62■■■□□ 2.65
HDAC7-220ENST00000471235 MAGI3Q5TCQ9 1506 aa31.61■■■□□ 2.65
HDAC7-220ENST00000471235 TEX14Q8IWB6 1497 aa31.61■■■□□ 2.65
HDAC7-220ENST00000471235 CD109Q6YHK3 1445 aa31.61■■■□□ 2.65
HDAC7-220ENST00000471235 VPS8Q8N3P4 1428 aa31.6■■■□□ 2.65
HDAC7-220ENST00000471235 KDM6BO15054 1643 aa31.6■■■□□ 2.65
HDAC7-220ENST00000471235 TROQ12816 1431 aaPredicted RBP31.58■■■□□ 2.65
HDAC7-220ENST00000471235 MYO5CQ9NQX4 1742 aa31.55■■■□□ 2.64
HDAC7-220ENST00000471235 CDK11AQ9UQ88 783 aaPredicted RBP31.53■■■□□ 2.64
HDAC7-220ENST00000471235 TIAM1Q13009 1591 aa31.47■■■□□ 2.63
HDAC7-220ENST00000471235 CFAP74Q9C0B2 1584 aa31.46■■■□□ 2.63
HDAC7-220ENST00000471235 EHBP1L1Q8N3D4 1523 aa31.43■■■□□ 2.62
HDAC7-220ENST00000471235 CDC42BPAQ5VT25 1732 aa31.42■■■□□ 2.62
HDAC7-220ENST00000471235 PREX2Q70Z35 1606 aa31.41■■■□□ 2.62
HDAC7-220ENST00000471235 CDC42BPBQ9Y5S2 1711 aa31.41■■■□□ 2.62
HDAC7-220ENST00000471235 NEO1Q92859 1461 aa31.39■■■□□ 2.62
HDAC7-220ENST00000471235 COL17A1Q9UMD9 1497 aaPredicted RBP31.38■■■□□ 2.61
HDAC7-220ENST00000471235 ARAP3Q8WWN8 1544 aa31.38■■■□□ 2.61
HDAC7-220ENST00000471235 MTUS2Q5JR59 1369 aa31.34■■■□□ 2.61
HDAC7-220ENST00000471235 MAP3K1Q13233 1512 aa31.34■■■□□ 2.61
HDAC7-220ENST00000471235 FANCAO15360 1455 aa31.33■■■□□ 2.61
HDAC7-220ENST00000471235 PLCH2O75038 1416 aa31.33■■■□□ 2.61
HDAC7-220ENST00000471235 SUPT6HQ7KZ85 1726 aaKnown RBP31.32■■■□□ 2.6
HDAC7-220ENST00000471235 PHLDB1Q86UU1 1377 aa31.29■■■□□ 2.6
HDAC7-220ENST00000471235 ARHGAP5Q13017 1502 aa31.29■■■□□ 2.6
HDAC7-220ENST00000471235 FRMPD1Q5SYB0 1578 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms