RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
NUP98-209ENST00000469881 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
NUP98-209ENST00000469881 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
NUP98-209ENST00000469881 PRG4Q92954 1404 aaPredicted RBP17.13■□□□□ 0.33
NUP98-209ENST00000469881 MAPKBP1O60336 1514 aa17.1■□□□□ 0.33
NUP98-209ENST00000469881 ADCY10Q96PN6 1610 aa17.08■□□□□ 0.32
NUP98-209ENST00000469881 DIP2BQ9P265 1576 aa17.08■□□□□ 0.32
NUP98-209ENST00000469881 CUL7Q14999 1698 aa17.07■□□□□ 0.32
NUP98-209ENST00000469881 ABCC10Q5T3U5 1492 aa17.05■□□□□ 0.32
NUP98-209ENST00000469881 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
NUP98-209ENST00000469881 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
NUP98-209ENST00000469881 KDM6BO15054 1643 aa16.99■□□□□ 0.31
NUP98-209ENST00000469881 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
NUP98-209ENST00000469881 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
NUP98-209ENST00000469881 FAM69CQ0P6D2 419 aa16.93■□□□□ 0.3
NUP98-209ENST00000469881 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
NUP98-209ENST00000469881 IGF1RP08069 1367 aa16.89■□□□□ 0.29
NUP98-209ENST00000469881 IQGAP2Q13576 1575 aa16.87■□□□□ 0.29
NUP98-209ENST00000469881 PPRC1Q5VV67 1664 aaKnown RBP16.86■□□□□ 0.29
NUP98-209ENST00000469881 ABCC2Q92887 1545 aa16.84■□□□□ 0.29
NUP98-209ENST00000469881 GLI2P10070 1586 aa16.82■□□□□ 0.28
NUP98-209ENST00000469881 PTPRGP23470 1445 aa16.81■□□□□ 0.28
NUP98-209ENST00000469881 CARMIL2Q6F5E8 1435 aa16.81■□□□□ 0.28
NUP98-209ENST00000469881 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
NUP98-209ENST00000469881 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
NUP98-209ENST00000469881 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
NUP98-209ENST00000469881 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
NUP98-209ENST00000469881 PLB1Q6P1J6 1458 aa16.77■□□□□ 0.28
NUP98-209ENST00000469881 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
NUP98-209ENST00000469881 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
NUP98-209ENST00000469881 ZCCHC11Q5TAX3 1644 aaKnown RBP16.74■□□□□ 0.27
NUP98-209ENST00000469881 KDM4FA0A1W2PPD8 638 aa16.74■□□□□ 0.27
NUP98-209ENST00000469881 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
NUP98-209ENST00000469881 KIAA0556O60303 1618 aa16.73■□□□□ 0.27
NUP98-209ENST00000469881 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
NUP98-209ENST00000469881 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
NUP98-209ENST00000469881 KDM5BQ9UGL1 1544 aa16.7■□□□□ 0.26
NUP98-209ENST00000469881 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
NUP98-209ENST00000469881 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
NUP98-209ENST00000469881 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
NUP98-209ENST00000469881 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
NUP98-209ENST00000469881 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
NUP98-209ENST00000469881 CFAP43Q8NDM7 1665 aa16.62■□□□□ 0.25
NUP98-209ENST00000469881 COL17A1Q9UMD9 1497 aaPredicted RBP16.61■□□□□ 0.25
NUP98-209ENST00000469881 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
NUP98-209ENST00000469881 ABCA8O94911 1581 aa16.55■□□□□ 0.24
NUP98-209ENST00000469881 HECW2Q9P2P5 1572 aa16.55■□□□□ 0.24
NUP98-209ENST00000469881 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
NUP98-209ENST00000469881 MAGI3Q5TCQ9 1506 aa16.52■□□□□ 0.24
NUP98-209ENST00000469881 KIF21BO75037 1637 aa16.49■□□□□ 0.23
NUP98-209ENST00000469881 CD109Q6YHK3 1445 aa16.46■□□□□ 0.23
NUP98-209ENST00000469881 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
NUP98-209ENST00000469881 PRXQ9BXM0 1461 aa16.44■□□□□ 0.22
NUP98-209ENST00000469881 ABCA9Q8IUA7 1624 aa16.42■□□□□ 0.22
NUP98-209ENST00000469881 ARAP3Q8WWN8 1544 aa16.4■□□□□ 0.22
NUP98-209ENST00000469881 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
NUP98-209ENST00000469881 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
NUP98-209ENST00000469881 ADAMTSL3P82987 1691 aa16.36■□□□□ 0.21
NUP98-209ENST00000469881 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
NUP98-209ENST00000469881 ATP10BO94823 1461 aa16.34■□□□□ 0.21
NUP98-209ENST00000469881 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
NUP98-209ENST00000469881 BCORL1Q5H9F3 1711 aa16.31■□□□□ 0.2
NUP98-209ENST00000469881 FOXD1Q16676 465 aa16.31■□□□□ 0.2
NUP98-209ENST00000469881 NEO1Q92859 1461 aa16.3■□□□□ 0.2
NUP98-209ENST00000469881 PHLDB1Q86UU1 1377 aa16.3■□□□□ 0.2
NUP98-209ENST00000469881 MADDQ8WXG6 1647 aa16.27■□□□□ 0.2
NUP98-209ENST00000469881 FAM9AQ8IZU1 332 aaPredicted RBP16.27■□□□□ 0.2
NUP98-209ENST00000469881 RICTORQ6R327 1708 aa16.27■□□□□ 0.19
NUP98-209ENST00000469881 CFAP74Q9C0B2 1584 aa16.26■□□□□ 0.19
NUP98-209ENST00000469881 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
NUP98-209ENST00000469881 PTPRMP28827 1452 aa16.26■□□□□ 0.19
NUP98-209ENST00000469881 NUP153P49790 1475 aaKnown RBP16.24■□□□□ 0.19
NUP98-209ENST00000469881 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
NUP98-209ENST00000469881 RIMS1Q86UR5 1692 aaKnown RBP16.22■□□□□ 0.19
NUP98-209ENST00000469881 P3H3Q8IVL6 736 aa16.22■□□□□ 0.19
NUP98-209ENST00000469881 PCF11O94913 1555 aaKnown RBP16.21■□□□□ 0.19
NUP98-209ENST00000469881 ZMYM4Q5VZL5 1548 aa16.18■□□□□ 0.18
NUP98-209ENST00000469881 TTC37Q6PGP7 1564 aa16.17■□□□□ 0.18
NUP98-209ENST00000469881 RAPGEF3O95398 923 aa16.17■□□□□ 0.18
NUP98-209ENST00000469881 EFCAB5A4FU69 1503 aa16.17■□□□□ 0.18
NUP98-209ENST00000469881 EEA1Q15075 1411 aa16.17■□□□□ 0.18
NUP98-209ENST00000469881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.16■□□□□ 0.18
NUP98-209ENST00000469881 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
NUP98-209ENST00000469881 LMTK3Q96Q04 1460 aa16.16■□□□□ 0.18
NUP98-209ENST00000469881 SIGLEC1Q9BZZ2 1709 aa16.15■□□□□ 0.18
NUP98-209ENST00000469881 DENND4BO75064 1496 aaPredicted RBP16.15■□□□□ 0.18
NUP98-209ENST00000469881 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
NUP98-209ENST00000469881 FANCAO15360 1455 aa16.14■□□□□ 0.17
NUP98-209ENST00000469881 FER1L4A9Z1Z3 1794 aa16.13■□□□□ 0.17
NUP98-209ENST00000469881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
NUP98-209ENST00000469881 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
NUP98-209ENST00000469881 FBXO41Q8TF61 875 aa16.12■□□□□ 0.17
NUP98-209ENST00000469881 ZFYVE16Q7Z3T8 1539 aa16.12■□□□□ 0.17
NUP98-209ENST00000469881 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
NUP98-209ENST00000469881 MYO5CQ9NQX4 1742 aa16.1■□□□□ 0.17
NUP98-209ENST00000469881 ARID4BQ4LE39 1312 aaPredicted RBP16.09■□□□□ 0.17
NUP98-209ENST00000469881 HECW1Q76N89 1606 aa16.08■□□□□ 0.16
NUP98-209ENST00000469881 POGZQ7Z3K3 1410 aa16.07■□□□□ 0.16
NUP98-209ENST00000469881 MAGI2Q86UL8 1455 aa16.07■□□□□ 0.16
NUP98-209ENST00000469881 CDK13Q14004 1512 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms