RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
NUP98-209ENST00000469881 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
NUP98-209ENST00000469881 ABCC9O60706 1549 aa22.11■■□□□ 1.13
NUP98-209ENST00000469881 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
NUP98-209ENST00000469881 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
NUP98-209ENST00000469881 NACADO15069 1562 aa20.85■□□□□ 0.93
NUP98-209ENST00000469881 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
NUP98-209ENST00000469881 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
NUP98-209ENST00000469881 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
NUP98-209ENST00000469881 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.87
NUP98-209ENST00000469881 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
NUP98-209ENST00000469881 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
NUP98-209ENST00000469881 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
NUP98-209ENST00000469881 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
NUP98-209ENST00000469881 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
NUP98-209ENST00000469881 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
NUP98-209ENST00000469881 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
NUP98-209ENST00000469881 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
NUP98-209ENST00000469881 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
NUP98-209ENST00000469881 CECR2Q9BXF3 1484 aa19.95■□□□□ 0.78
NUP98-209ENST00000469881 DNAJC5Q9H3Z4 198 aa19.27■□□□□ 0.68
NUP98-209ENST00000469881 CUX2O14529 1486 aa19.21■□□□□ 0.67
NUP98-209ENST00000469881 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
NUP98-209ENST00000469881 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
NUP98-209ENST00000469881 HMGXB3Q12766 1538 aa19.12■□□□□ 0.65
NUP98-209ENST00000469881 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
NUP98-209ENST00000469881 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
NUP98-209ENST00000469881 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
NUP98-209ENST00000469881 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
NUP98-209ENST00000469881 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
NUP98-209ENST00000469881 NESP48681 1621 aa18.94■□□□□ 0.62
NUP98-209ENST00000469881 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
NUP98-209ENST00000469881 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
NUP98-209ENST00000469881 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
NUP98-209ENST00000469881 KIF21AQ7Z4S6 1674 aa18.84■□□□□ 0.61
NUP98-209ENST00000469881 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
NUP98-209ENST00000469881 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
NUP98-209ENST00000469881 WDR62O43379 1518 aa18.58■□□□□ 0.56
NUP98-209ENST00000469881 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.56
NUP98-209ENST00000469881 WIZO95785 1651 aa18.57■□□□□ 0.56
NUP98-209ENST00000469881 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
NUP98-209ENST00000469881 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
NUP98-209ENST00000469881 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
NUP98-209ENST00000469881 PRDM2Q13029 1718 aa18.38■□□□□ 0.53
NUP98-209ENST00000469881 CFTRP13569 1480 aa18.34■□□□□ 0.53
NUP98-209ENST00000469881 PHF23Q9BUL5 403 aaPredicted RBP18.34■□□□□ 0.53
NUP98-209ENST00000469881 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.53
NUP98-209ENST00000469881 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
NUP98-209ENST00000469881 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
NUP98-209ENST00000469881 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
NUP98-209ENST00000469881 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
NUP98-209ENST00000469881 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
NUP98-209ENST00000469881 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
NUP98-209ENST00000469881 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
NUP98-209ENST00000469881 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
NUP98-209ENST00000469881 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
NUP98-209ENST00000469881 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
NUP98-209ENST00000469881 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
NUP98-209ENST00000469881 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
NUP98-209ENST00000469881 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
NUP98-209ENST00000469881 ARHGEF11O15085 1522 aa17.99■□□□□ 0.47
NUP98-209ENST00000469881 CHD1O14646 1710 aa17.99■□□□□ 0.47
NUP98-209ENST00000469881 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
NUP98-209ENST00000469881 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
NUP98-209ENST00000469881 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
NUP98-209ENST00000469881 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.443e-7■■■■■ 37.3
NUP98-209ENST00000469881 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
NUP98-209ENST00000469881 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
NUP98-209ENST00000469881 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
NUP98-209ENST00000469881 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
NUP98-209ENST00000469881 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
NUP98-209ENST00000469881 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
NUP98-209ENST00000469881 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
NUP98-209ENST00000469881 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
NUP98-209ENST00000469881 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
NUP98-209ENST00000469881 SOGA1O94964 1423 aa17.68■□□□□ 0.42
NUP98-209ENST00000469881 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
NUP98-209ENST00000469881 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
NUP98-209ENST00000469881 FBLN2P98095 1184 aa17.66■□□□□ 0.42
NUP98-209ENST00000469881 CUX1P39880 1505 aa17.66■□□□□ 0.42
NUP98-209ENST00000469881 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
NUP98-209ENST00000469881 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
NUP98-209ENST00000469881 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
NUP98-209ENST00000469881 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
NUP98-209ENST00000469881 ABCA5Q8WWZ7 1642 aa17.56■□□□□ 0.4
NUP98-209ENST00000469881 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
NUP98-209ENST00000469881 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
NUP98-209ENST00000469881 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
NUP98-209ENST00000469881 ADAMTS12P58397 1594 aa17.44■□□□□ 0.38
NUP98-209ENST00000469881 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
NUP98-209ENST00000469881 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
NUP98-209ENST00000469881 CEP170Q5SW79 1584 aa17.38■□□□□ 0.37
NUP98-209ENST00000469881 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
NUP98-209ENST00000469881 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
NUP98-209ENST00000469881 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
NUP98-209ENST00000469881 NUP160Q12769 1436 aa17.34■□□□□ 0.37
NUP98-209ENST00000469881 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.36
NUP98-209ENST00000469881 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
NUP98-209ENST00000469881 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
NUP98-209ENST00000469881 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms