RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 CTTNBP2Q8WZ74 1663 aa20.5■□□□□ 0.87
RUNX1-213ENST00000469087 CLIP1P30622 1438 aa20.49■□□□□ 0.87
RUNX1-213ENST00000469087 CHD1O14646 1710 aa20.45■□□□□ 0.86
RUNX1-213ENST00000469087 CEP170Q5SW79 1584 aa20.43■□□□□ 0.86
RUNX1-213ENST00000469087 NUP160Q12769 1436 aa20.43■□□□□ 0.86
RUNX1-213ENST00000469087 KIAA0586Q9BVV6 1533 aa20.42■□□□□ 0.86
RUNX1-213ENST00000469087 ARHGAP35Q9NRY4 1499 aa20.39■□□□□ 0.85
RUNX1-213ENST00000469087 IQGAP2Q13576 1575 aa20.39■□□□□ 0.85
RUNX1-213ENST00000469087 P3H3Q8IVL6 736 aa20.36■□□□□ 0.85
RUNX1-213ENST00000469087 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
RUNX1-213ENST00000469087 JPH4Q96JJ6 628 aa20.32■□□□□ 0.84
RUNX1-213ENST00000469087 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
RUNX1-213ENST00000469087 EFCAB5A4FU69 1503 aa20.29■□□□□ 0.84
RUNX1-213ENST00000469087 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
RUNX1-213ENST00000469087 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
RUNX1-213ENST00000469087 VPS8Q8N3P4 1428 aa20.26■□□□□ 0.83
RUNX1-213ENST00000469087 DISP1Q96F81 1524 aa20.24■□□□□ 0.83
RUNX1-213ENST00000469087 OSCARQ8IYS5 282 aa20.23■□□□□ 0.83
RUNX1-213ENST00000469087 CLASP1Q7Z460 1538 aa20.21■□□□□ 0.83
RUNX1-213ENST00000469087 KIAA0556O60303 1618 aa20.18■□□□□ 0.82
RUNX1-213ENST00000469087 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
RUNX1-213ENST00000469087 SHROOM2Q13796 1616 aa20.17■□□□□ 0.82
RUNX1-213ENST00000469087 CARMIL2Q6F5E8 1435 aa20.16■□□□□ 0.82
RUNX1-213ENST00000469087 FMN1Q68DA7 1419 aa20.14■□□□□ 0.81
RUNX1-213ENST00000469087 TTBK1Q5TCY1 1321 aaPredicted RBP20.13■□□□□ 0.81
RUNX1-213ENST00000469087 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
RUNX1-213ENST00000469087 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
RUNX1-213ENST00000469087 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.8
RUNX1-213ENST00000469087 CASKIN1Q8WXD9 1431 aa20.07■□□□□ 0.8
RUNX1-213ENST00000469087 APLP2Q06481 763 aa20.06■□□□□ 0.8
RUNX1-213ENST00000469087 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
RUNX1-213ENST00000469087 FYCO1Q9BQS8 1478 aa20.03■□□□□ 0.8
RUNX1-213ENST00000469087 PTPRGP23470 1445 aa20.02■□□□□ 0.8
RUNX1-213ENST00000469087 PLB1Q6P1J6 1458 aa19.99■□□□□ 0.79
RUNX1-213ENST00000469087 KANK4Q5T7N3 995 aaPredicted RBP19.98■□□□□ 0.79
RUNX1-213ENST00000469087 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
RUNX1-213ENST00000469087 RAPGEF6Q8TEU7 1601 aa19.96■□□□□ 0.79
RUNX1-213ENST00000469087 MAP3K1Q13233 1512 aa19.95■□□□□ 0.78
RUNX1-213ENST00000469087 TIAM1Q13009 1591 aa19.94■□□□□ 0.78
RUNX1-213ENST00000469087 ARID3CA6NKF2 412 aa19.93■□□□□ 0.78
RUNX1-213ENST00000469087 HECW1Q76N89 1606 aa19.93■□□□□ 0.78
RUNX1-213ENST00000469087 ABCA8O94911 1581 aa19.93■□□□□ 0.78
RUNX1-213ENST00000469087 NUP153P49790 1475 aaKnown RBP19.93■□□□□ 0.78
RUNX1-213ENST00000469087 EPRSP07814 1512 aaKnown RBP19.91■□□□□ 0.78
RUNX1-213ENST00000469087 UACAQ9BZF9 1416 aa19.89■□□□□ 0.77
RUNX1-213ENST00000469087 CFAP43Q8NDM7 1665 aa19.89■□□□□ 0.77
RUNX1-213ENST00000469087 CDK13Q14004 1512 aaKnown RBP19.87■□□□□ 0.77
RUNX1-213ENST00000469087 CCDC18Q5T9S5 1454 aa19.87■□□□□ 0.77
RUNX1-213ENST00000469087 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
RUNX1-213ENST00000469087 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
RUNX1-213ENST00000469087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
RUNX1-213ENST00000469087 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
RUNX1-213ENST00000469087 ATP10BO94823 1461 aa19.83■□□□□ 0.76
RUNX1-213ENST00000469087 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
RUNX1-213ENST00000469087 ABCC2Q92887 1545 aa19.81■□□□□ 0.76
RUNX1-213ENST00000469087 MTUS2Q5JR59 1369 aa19.8■□□□□ 0.76
RUNX1-213ENST00000469087 MAGI3Q5TCQ9 1506 aa19.8■□□□□ 0.76
RUNX1-213ENST00000469087 UHRF1BP1LA0JNW5 1464 aa19.79■□□□□ 0.76
RUNX1-213ENST00000469087 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
RUNX1-213ENST00000469087 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
RUNX1-213ENST00000469087 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
RUNX1-213ENST00000469087 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.76
RUNX1-213ENST00000469087 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
RUNX1-213ENST00000469087 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
RUNX1-213ENST00000469087 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
RUNX1-213ENST00000469087 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
RUNX1-213ENST00000469087 CYB5RLQ6IPT4 315 aa19.72■□□□□ 0.75
RUNX1-213ENST00000469087 KDM5BQ9UGL1 1544 aa19.72■□□□□ 0.75
RUNX1-213ENST00000469087 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
RUNX1-213ENST00000469087 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
RUNX1-213ENST00000469087 ZCCHC11Q5TAX3 1644 aaKnown RBP19.69■□□□□ 0.74
RUNX1-213ENST00000469087 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
RUNX1-213ENST00000469087 SUPT6HQ7KZ85 1726 aaKnown RBP19.68■□□□□ 0.74
RUNX1-213ENST00000469087 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
RUNX1-213ENST00000469087 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
RUNX1-213ENST00000469087 KIF14Q15058 1648 aa19.61■□□□□ 0.73
RUNX1-213ENST00000469087 KCNH8Q96L42 1107 aa19.59■□□□□ 0.73
RUNX1-213ENST00000469087 MYOM3Q5VTT5 1437 aa19.58■□□□□ 0.72
RUNX1-213ENST00000469087 CCNB3Q8WWL7 1395 aa19.58■□□□□ 0.72
RUNX1-213ENST00000469087 FGD6Q6ZV73 1430 aa19.55■□□□□ 0.72
RUNX1-213ENST00000469087 ASXL2Q76L83 1435 aa19.55■□□□□ 0.72
RUNX1-213ENST00000469087 ABCC10Q5T3U5 1492 aa19.55■□□□□ 0.72
RUNX1-213ENST00000469087 WDR7Q9Y4E6 1490 aa19.53■□□□□ 0.72
RUNX1-213ENST00000469087 GPATCH8Q9UKJ3 1502 aaKnown RBP19.52■□□□□ 0.72
RUNX1-213ENST00000469087 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.71
RUNX1-213ENST00000469087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.5■□□□□ 0.71
RUNX1-213ENST00000469087 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
RUNX1-213ENST00000469087 MIA2Q96PC5 1412 aa19.49■□□□□ 0.71
RUNX1-213ENST00000469087 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
RUNX1-213ENST00000469087 CDC42BPAQ5VT25 1732 aa19.47■□□□□ 0.71
RUNX1-213ENST00000469087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.47■□□□□ 0.71
RUNX1-213ENST00000469087 TTC37Q6PGP7 1564 aa19.46■□□□□ 0.71
RUNX1-213ENST00000469087 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
RUNX1-213ENST00000469087 ZNF644Q9H582 1327 aaPredicted RBP19.46■□□□□ 0.71
RUNX1-213ENST00000469087 ITGAEP38570 1179 aa19.45■□□□□ 0.7
RUNX1-213ENST00000469087 ITSN2Q9NZM3 1697 aa19.44■□□□□ 0.7
RUNX1-213ENST00000469087 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
RUNX1-213ENST00000469087 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
RUNX1-213ENST00000469087 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
RUNX1-213ENST00000469087 CDC42BPBQ9Y5S2 1711 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms