RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
RUNX1-213ENST00000469087 CCDC180Q9P1Z9 1646 aa26.03■■□□□ 1.76
RUNX1-213ENST00000469087 ABCC9O60706 1549 aa24.94■■□□□ 1.58
RUNX1-213ENST00000469087 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
RUNX1-213ENST00000469087 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
RUNX1-213ENST00000469087 DCAF1Q9Y4B6 1507 aa24.57■■□□□ 1.52
RUNX1-213ENST00000469087 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.5
RUNX1-213ENST00000469087 NACADO15069 1562 aa24.34■■□□□ 1.49
RUNX1-213ENST00000469087 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
RUNX1-213ENST00000469087 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
RUNX1-213ENST00000469087 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
RUNX1-213ENST00000469087 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
RUNX1-213ENST00000469087 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
RUNX1-213ENST00000469087 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
RUNX1-213ENST00000469087 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
RUNX1-213ENST00000469087 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
RUNX1-213ENST00000469087 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
RUNX1-213ENST00000469087 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
RUNX1-213ENST00000469087 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
RUNX1-213ENST00000469087 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
RUNX1-213ENST00000469087 EIF4G1Q04637 1599 aaKnown RBP22.81■■□□□ 1.24
RUNX1-213ENST00000469087 WIZO95785 1651 aa22.77■■□□□ 1.24
RUNX1-213ENST00000469087 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.22
RUNX1-213ENST00000469087 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
RUNX1-213ENST00000469087 SMARCA2P51531 1590 aa22.58■■□□□ 1.21
RUNX1-213ENST00000469087 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
RUNX1-213ENST00000469087 NCAPD3P42695 1498 aa22.5■■□□□ 1.19
RUNX1-213ENST00000469087 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
RUNX1-213ENST00000469087 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
RUNX1-213ENST00000469087 HMGXB3Q12766 1538 aa22.39■■□□□ 1.18
RUNX1-213ENST00000469087 DNAJC5BQ9UF47 199 aa22.35■■□□□ 1.17
RUNX1-213ENST00000469087 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
RUNX1-213ENST00000469087 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
RUNX1-213ENST00000469087 CFTRP13569 1480 aa21.91■■□□□ 1.1
RUNX1-213ENST00000469087 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.1
RUNX1-213ENST00000469087 NESP48681 1621 aa21.82■■□□□ 1.08
RUNX1-213ENST00000469087 LAMC3Q9Y6N6 1575 aa21.75■■□□□ 1.07
RUNX1-213ENST00000469087 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
RUNX1-213ENST00000469087 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
RUNX1-213ENST00000469087 TRIM41Q8WV44 630 aa21.66■■□□□ 1.06
RUNX1-213ENST00000469087 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
RUNX1-213ENST00000469087 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
RUNX1-213ENST00000469087 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
RUNX1-213ENST00000469087 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
RUNX1-213ENST00000469087 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
RUNX1-213ENST00000469087 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
RUNX1-213ENST00000469087 CUX1P39880 1505 aa21.49■■□□□ 1.03
RUNX1-213ENST00000469087 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
RUNX1-213ENST00000469087 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
RUNX1-213ENST00000469087 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.02
RUNX1-213ENST00000469087 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
RUNX1-213ENST00000469087 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
RUNX1-213ENST00000469087 DNMBPQ6XZF7 1577 aa21.37■■□□□ 1.01
RUNX1-213ENST00000469087 MRC2Q9UBG0 1479 aa21.33■■□□□ 1
RUNX1-213ENST00000469087 FGD5Q6ZNL6 1462 aa21.3■■□□□ 1
RUNX1-213ENST00000469087 FAM9AQ8IZU1 332 aaPredicted RBP21.28■■□□□ 1
RUNX1-213ENST00000469087 SOGA1O94964 1423 aa21.27■■□□□ 1
RUNX1-213ENST00000469087 POLA1P09884 1462 aaPredicted RBP21.25■□□□□ 0.99
RUNX1-213ENST00000469087 THOC2Q8NI27 1593 aaKnown RBP21.22■□□□□ 0.99
RUNX1-213ENST00000469087 WDR62O43379 1518 aa21.22■□□□□ 0.99
RUNX1-213ENST00000469087 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
RUNX1-213ENST00000469087 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
RUNX1-213ENST00000469087 CUX2O14529 1486 aa21.13■□□□□ 0.97
RUNX1-213ENST00000469087 EEA1Q15075 1411 aa21.12■□□□□ 0.97
RUNX1-213ENST00000469087 CSRNP3Q8WYN3 585 aa21.1■□□□□ 0.97
RUNX1-213ENST00000469087 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
RUNX1-213ENST00000469087 KIF27Q86VH2 1401 aa21.09■□□□□ 0.97
RUNX1-213ENST00000469087 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.96
RUNX1-213ENST00000469087 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.96
RUNX1-213ENST00000469087 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
RUNX1-213ENST00000469087 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
RUNX1-213ENST00000469087 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
RUNX1-213ENST00000469087 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
RUNX1-213ENST00000469087 IGF1RP08069 1367 aa20.98■□□□□ 0.95
RUNX1-213ENST00000469087 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
RUNX1-213ENST00000469087 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
RUNX1-213ENST00000469087 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
RUNX1-213ENST00000469087 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
RUNX1-213ENST00000469087 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
RUNX1-213ENST00000469087 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
RUNX1-213ENST00000469087 KIF21BO75037 1637 aa20.85■□□□□ 0.93
RUNX1-213ENST00000469087 ERICH3Q5RHP9 1530 aa20.84■□□□□ 0.93
RUNX1-213ENST00000469087 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.93
RUNX1-213ENST00000469087 EIF4G3O43432 1585 aaKnown RBP20.83■□□□□ 0.92
RUNX1-213ENST00000469087 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
RUNX1-213ENST00000469087 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
RUNX1-213ENST00000469087 PBRM1Q86U86 1689 aa20.81■□□□□ 0.92
RUNX1-213ENST00000469087 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
RUNX1-213ENST00000469087 CUL7Q14999 1698 aa20.77■□□□□ 0.91
RUNX1-213ENST00000469087 TNIKQ9UKE5 1360 aa20.73■□□□□ 0.91
RUNX1-213ENST00000469087 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
RUNX1-213ENST00000469087 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
RUNX1-213ENST00000469087 ADAMTS12P58397 1594 aa20.68■□□□□ 0.9
RUNX1-213ENST00000469087 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
RUNX1-213ENST00000469087 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
RUNX1-213ENST00000469087 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
RUNX1-213ENST00000469087 FBLN2P98095 1184 aa20.59■□□□□ 0.89
RUNX1-213ENST00000469087 CEP162Q5TB80 1403 aa20.57■□□□□ 0.88
RUNX1-213ENST00000469087 RANGAP1P46060 587 aaPredicted RBP20.57■□□□□ 0.88
RUNX1-213ENST00000469087 GRIN2AQ12879 1464 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms