RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
ABCF3-207ENST00000468892 ARHGAP35Q9NRY4 1499 aa29.24■■■□□ 2.27
ABCF3-207ENST00000468892 EFCAB5A4FU69 1503 aa29.23■■■□□ 2.27
ABCF3-207ENST00000468892 ARAP1Q96P48 1450 aa29.21■■■□□ 2.27
ABCF3-207ENST00000468892 GRIN2AQ12879 1464 aa29.2■■■□□ 2.27
ABCF3-207ENST00000468892 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
ABCF3-207ENST00000468892 APLP2Q06481 763 aa29.17■■■□□ 2.26
ABCF3-207ENST00000468892 TRIM26Q12899 539 aaPredicted RBP29.13■■■□□ 2.25
ABCF3-207ENST00000468892 IQGAP2Q13576 1575 aa29.11■■■□□ 2.25
ABCF3-207ENST00000468892 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
ABCF3-207ENST00000468892 FBLN2P98095 1184 aa29.07■■■□□ 2.24
ABCF3-207ENST00000468892 SAMD9Q5K651 1589 aa29.03■■■□□ 2.24
ABCF3-207ENST00000468892 NUP160Q12769 1436 aa28.99■■■□□ 2.23
ABCF3-207ENST00000468892 FMN1Q68DA7 1419 aa28.99■■■□□ 2.23
ABCF3-207ENST00000468892 UGGT2Q9NYU1 1516 aa28.99■■■□□ 2.23
ABCF3-207ENST00000468892 P3H3Q8IVL6 736 aa28.97■■■□□ 2.23
ABCF3-207ENST00000468892 PCGF6Q9BYE7 350 aa28.97■■■□□ 2.23
ABCF3-207ENST00000468892 FHOD3Q2V2M9 1422 aa28.96■■■□□ 2.23
ABCF3-207ENST00000468892 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
ABCF3-207ENST00000468892 PPARGC1BQ86YN6 1023 aaKnown RBP28.92■■■□□ 2.22
ABCF3-207ENST00000468892 MAP3K1Q13233 1512 aa28.88■■■□□ 2.21
ABCF3-207ENST00000468892 FYCO1Q9BQS8 1478 aa28.87■■■□□ 2.21
ABCF3-207ENST00000468892 CASKIN1Q8WXD9 1431 aa28.86■■■□□ 2.21
ABCF3-207ENST00000468892 CHD1O14646 1710 aa28.83■■■□□ 2.21
ABCF3-207ENST00000468892 CARMIL2Q6F5E8 1435 aa28.81■■■□□ 2.2
ABCF3-207ENST00000468892 PCF11O94913 1555 aaKnown RBP28.8■■■□□ 2.2
ABCF3-207ENST00000468892 JPH4Q96JJ6 628 aa28.79■■■□□ 2.2
ABCF3-207ENST00000468892 KIAA0556O60303 1618 aa28.78■■■□□ 2.2
ABCF3-207ENST00000468892 DISP1Q96F81 1524 aa28.76■■■□□ 2.19
ABCF3-207ENST00000468892 ATP1B4Q9UN42 357 aaPredicted RBP28.75■■■□□ 2.19
ABCF3-207ENST00000468892 TIAM1Q13009 1591 aa28.74■■■□□ 2.19
ABCF3-207ENST00000468892 TTBK1Q5TCY1 1321 aaPredicted RBP28.73■■■□□ 2.19
ABCF3-207ENST00000468892 CFAP43Q8NDM7 1665 aa28.69■■■□□ 2.18
ABCF3-207ENST00000468892 HECW1Q76N89 1606 aa28.64■■■□□ 2.18
ABCF3-207ENST00000468892 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
ABCF3-207ENST00000468892 CCDC18Q5T9S5 1454 aa28.64■■■□□ 2.18
ABCF3-207ENST00000468892 LRRC9Q6ZRR7 1453 aa28.62■■■□□ 2.17
ABCF3-207ENST00000468892 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
ABCF3-207ENST00000468892 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
ABCF3-207ENST00000468892 CLASP1Q7Z460 1538 aa28.55■■■□□ 2.16
ABCF3-207ENST00000468892 RAPGEF6Q8TEU7 1601 aa28.52■■■□□ 2.16
ABCF3-207ENST00000468892 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
ABCF3-207ENST00000468892 EPRSP07814 1512 aaKnown RBP28.49■■■□□ 2.15
ABCF3-207ENST00000468892 PTPRGP23470 1445 aa28.46■■■□□ 2.15
ABCF3-207ENST00000468892 LRRIQ1Q96JM4 1722 aa28.44■■■□□ 2.14
ABCF3-207ENST00000468892 EHBP1L1Q8N3D4 1523 aa28.44■■■□□ 2.14
ABCF3-207ENST00000468892 CDK11AQ9UQ88 783 aaPredicted RBP28.43■■■□□ 2.14
ABCF3-207ENST00000468892 RRBP1Q9P2E9 1410 aaKnown RBP28.41■■■□□ 2.14
ABCF3-207ENST00000468892 NUP153P49790 1475 aaKnown RBP28.41■■■□□ 2.14
ABCF3-207ENST00000468892 OSCARQ8IYS5 282 aa28.4■■■□□ 2.14
ABCF3-207ENST00000468892 PLB1Q6P1J6 1458 aa28.38■■■□□ 2.13
ABCF3-207ENST00000468892 ABCA8O94911 1581 aa28.38■■■□□ 2.13
ABCF3-207ENST00000468892 CCNB3Q8WWL7 1395 aa28.35■■■□□ 2.13
ABCF3-207ENST00000468892 SUPT6HQ7KZ85 1726 aaKnown RBP28.35■■■□□ 2.13
ABCF3-207ENST00000468892 CDK13Q14004 1512 aaKnown RBP28.34■■■□□ 2.13
ABCF3-207ENST00000468892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.32■■■□□ 2.12
ABCF3-207ENST00000468892 HNRNPUL2Q1KMD3 747 aaKnown RBP28.32■■■□□ 2.12
ABCF3-207ENST00000468892 PHLDB1Q86UU1 1377 aa28.29■■■□□ 2.12
ABCF3-207ENST00000468892 UACAQ9BZF9 1416 aa28.28■■■□□ 2.12
ABCF3-207ENST00000468892 NCOA2Q15596 1464 aa28.27■■■□□ 2.12
ABCF3-207ENST00000468892 ARID3CA6NKF2 412 aa28.24■■■□□ 2.11
ABCF3-207ENST00000468892 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
ABCF3-207ENST00000468892 MAGI3Q5TCQ9 1506 aa28.24■■■□□ 2.11
ABCF3-207ENST00000468892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.23■■■□□ 2.11
ABCF3-207ENST00000468892 ARHGEF11O15085 1522 aa28.2■■■□□ 2.11
ABCF3-207ENST00000468892 TROQ12816 1431 aaPredicted RBP28.2■■■□□ 2.1
ABCF3-207ENST00000468892 MYOM3Q5VTT5 1437 aa28.2■■■□□ 2.1
ABCF3-207ENST00000468892 ATP10BO94823 1461 aa28.19■■■□□ 2.1
ABCF3-207ENST00000468892 PLEKHD1A6NEE1 506 aa28.19■■■□□ 2.1
ABCF3-207ENST00000468892 ABCC2Q92887 1545 aa28.18■■■□□ 2.1
ABCF3-207ENST00000468892 FGD6Q6ZV73 1430 aa28.18■■■□□ 2.1
ABCF3-207ENST00000468892 UHRF1BP1LA0JNW5 1464 aa28.16■■■□□ 2.1
ABCF3-207ENST00000468892 FAM50AQ14320 339 aaKnown RBP28.13■■■□□ 2.09
ABCF3-207ENST00000468892 HRCP23327 699 aa28.11■■■□□ 2.09
ABCF3-207ENST00000468892 MIA2Q96PC5 1412 aa28.1■■■□□ 2.09
ABCF3-207ENST00000468892 ADCY10Q96PN6 1610 aa28.09■■■□□ 2.09
ABCF3-207ENST00000468892 ZEB1P37275 1124 aaPredicted RBP28.06■■■□□ 2.08
ABCF3-207ENST00000468892 KIF14Q15058 1648 aa28.03■■■□□ 2.08
ABCF3-207ENST00000468892 PTPN23Q9H3S7 1636 aa28.02■■■□□ 2.08
ABCF3-207ENST00000468892 TCOF1Q13428 1488 aaKnown RBP28.01■■■□□ 2.07
ABCF3-207ENST00000468892 ITGAEP38570 1179 aa28■■■□□ 2.07
ABCF3-207ENST00000468892 KDM5BQ9UGL1 1544 aa27.99■■■□□ 2.07
ABCF3-207ENST00000468892 ITSN2Q9NZM3 1697 aa27.99■■■□□ 2.07
ABCF3-207ENST00000468892 CCER1Q8TC90 406 aaPredicted RBP27.98■■■□□ 2.07
ABCF3-207ENST00000468892 ZCCHC11Q5TAX3 1644 aaKnown RBP27.93■■■□□ 2.06
ABCF3-207ENST00000468892 CFDP1Q9UEE9 299 aaPredicted RBP27.91■■■□□ 2.06
ABCF3-207ENST00000468892 GPATCH8Q9UKJ3 1502 aaKnown RBP27.9■■■□□ 2.06
ABCF3-207ENST00000468892 ABCC10Q5T3U5 1492 aa27.89■■■□□ 2.06
ABCF3-207ENST00000468892 NPM1P06748 294 aaKnown RBP eCLIP27.86■■■□□ 2.05
ABCF3-207ENST00000468892 SETD5Q9C0A6 1442 aa27.85■■■□□ 2.05
ABCF3-207ENST00000468892 CDC42BPAQ5VT25 1732 aa27.79■■■□□ 2.04
ABCF3-207ENST00000468892 CAMSAP2Q08AD1 1489 aa27.77■■■□□ 2.04
ABCF3-207ENST00000468892 WDR7Q9Y4E6 1490 aa27.75■■■□□ 2.03
ABCF3-207ENST00000468892 RAB3GAP2Q9H2M9 1393 aa27.75■■■□□ 2.03
ABCF3-207ENST00000468892 KCNH8Q96L42 1107 aa27.74■■■□□ 2.03
ABCF3-207ENST00000468892 DNMT1P26358 1616 aaKnown RBP27.74■■■□□ 2.03
ABCF3-207ENST00000468892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.74■■■□□ 2.03
ABCF3-207ENST00000468892 HFM1A2PYH4 1435 aa27.74■■■□□ 2.03
ABCF3-207ENST00000468892 AKNAQ7Z591 1439 aa27.74■■■□□ 2.03
ABCF3-207ENST00000468892 ZNF777Q9ULD5 760 aaPredicted RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms