RNA–Protein interactions for RNA: ENST00000468690.2

HNRNPU-207, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-207ENST00000468690 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
HNRNPU-207ENST00000468690 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
HNRNPU-207ENST00000468690 CFDP1Q9UEE9 299 aaPredicted RBP10.62□□□□□ -0.71
HNRNPU-207ENST00000468690 DAXXQ9UER7 740 aaPredicted RBP10.62□□□□□ -0.71
HNRNPU-207ENST00000468690 KIF21BO75037 1637 aa10.61□□□□□ -0.71
HNRNPU-207ENST00000468690 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
HNRNPU-207ENST00000468690 CFTRP13569 1480 aa10.61□□□□□ -0.71
HNRNPU-207ENST00000468690 ERICH3Q5RHP9 1530 aa10.6□□□□□ -0.71
HNRNPU-207ENST00000468690 SETD5Q9C0A6 1442 aa10.59□□□□□ -0.71
HNRNPU-207ENST00000468690 PEG3Q9GZU2 1588 aa10.59□□□□□ -0.71
HNRNPU-207ENST00000468690 EIF4G2P78344 907 aaKnown RBP eCLIP10.58□□□□□ -0.72
HNRNPU-207ENST00000468690 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
HNRNPU-207ENST00000468690 RRP7BPQ9NSQ0 103 aa10.56□□□□□ -0.72
HNRNPU-207ENST00000468690 TDRD9Q8NDG6 1382 aaKnown RBP10.56□□□□□ -0.72
HNRNPU-207ENST00000468690 CNGB1Q14028 1251 aaPredicted RBP10.56□□□□□ -0.72
HNRNPU-207ENST00000468690 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
HNRNPU-207ENST00000468690 TOP2BQ02880 1626 aa10.55□□□□□ -0.72
HNRNPU-207ENST00000468690 ESF1Q9H501 851 aaKnown RBP10.55□□□□□ -0.72
HNRNPU-207ENST00000468690 DDX10Q13206 875 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-207ENST00000468690 RUSC2Q8N2Y8 1516 aa10.53□□□□□ -0.72
HNRNPU-207ENST00000468690 NEFMP07197 916 aa10.53□□□□□ -0.72
HNRNPU-207ENST00000468690 IGF1RP08069 1367 aa10.53□□□□□ -0.72
HNRNPU-207ENST00000468690 CCDC18Q5T9S5 1454 aa10.51□□□□□ -0.73
HNRNPU-207ENST00000468690 GAPVD1Q14C86 1478 aa10.5□□□□□ -0.73
HNRNPU-207ENST00000468690 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
HNRNPU-207ENST00000468690 KANK4Q5T7N3 995 aaPredicted RBP10.49□□□□□ -0.73
HNRNPU-207ENST00000468690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.732e-14■■□□□ 13.7
HNRNPU-207ENST00000468690 SYNJ1O43426 1573 aa10.49□□□□□ -0.73
HNRNPU-207ENST00000468690 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
HNRNPU-207ENST00000468690 RSPH4AQ5TD94 716 aa10.49□□□□□ -0.73
HNRNPU-207ENST00000468690 FHOD3Q2V2M9 1422 aa10.47□□□□□ -0.73
HNRNPU-207ENST00000468690 CC2D2AQ9P2K1 1620 aa10.46□□□□□ -0.73
HNRNPU-207ENST00000468690 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.73
HNRNPU-207ENST00000468690 KCNH8Q96L42 1107 aa10.46□□□□□ -0.74
HNRNPU-207ENST00000468690 MIER1Q8N108 512 aa10.45□□□□□ -0.74
HNRNPU-207ENST00000468690 EFCAB5A4FU69 1503 aa10.45□□□□□ -0.74
HNRNPU-207ENST00000468690 CUX1P39880 1505 aa10.45□□□□□ -0.74
HNRNPU-207ENST00000468690 RAB3GAP2Q9H2M9 1393 aa10.44□□□□□ -0.74
HNRNPU-207ENST00000468690 PRXQ9BXM0 1461 aa10.44□□□□□ -0.74
HNRNPU-207ENST00000468690 TMC1Q8TDI8 760 aa10.44□□□□□ -0.74
HNRNPU-207ENST00000468690 ANKRD30AQ9BXX3 1397 aa10.44□□□□□ -0.74
HNRNPU-207ENST00000468690 CHGAP10645 457 aaKnown RBP10.44□□□□□ -0.74
HNRNPU-207ENST00000468690 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
HNRNPU-207ENST00000468690 KANK1Q14678 1352 aa10.44□□□□□ -0.74
HNRNPU-207ENST00000468690 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
HNRNPU-207ENST00000468690 DNMBPQ6XZF7 1577 aa10.43□□□□□ -0.74
HNRNPU-207ENST00000468690 BCANQ96GW7 911 aa10.42□□□□□ -0.74
HNRNPU-207ENST00000468690 KDM2AQ9Y2K7 1162 aa10.41□□□□□ -0.74
HNRNPU-207ENST00000468690 MRS2Q9HD23 443 aa10.41□□□□□ -0.74
HNRNPU-207ENST00000468690 LAMC3Q9Y6N6 1575 aa10.41□□□□□ -0.74
HNRNPU-207ENST00000468690 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
HNRNPU-207ENST00000468690 GRIN2BQ13224 1484 aa10.41□□□□□ -0.74
HNRNPU-207ENST00000468690 MRC2Q9UBG0 1479 aa10.41□□□□□ -0.74
HNRNPU-207ENST00000468690 CANXP27824 592 aaKnown RBP10.41□□□□□ -0.74
HNRNPU-207ENST00000468690 RAD54L2Q9Y4B4 1467 aa10.4□□□□□ -0.75
HNRNPU-207ENST00000468690 IFT140Q96RY7 1462 aa10.39□□□□□ -0.75
HNRNPU-207ENST00000468690 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.39□□□□□ -0.75
HNRNPU-207ENST00000468690 FYCO1Q9BQS8 1478 aa10.39□□□□□ -0.75
HNRNPU-207ENST00000468690 ZBTB47Q9UFB7 747 aaPredicted RBP10.39□□□□□ -0.75
HNRNPU-207ENST00000468690 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
HNRNPU-207ENST00000468690 CCER2I3L3R5 266 aa10.39□□□□□ -0.75
HNRNPU-207ENST00000468690 JPH4Q96JJ6 628 aa10.39□□□□□ -0.75
HNRNPU-207ENST00000468690 EFCAB2Q5VUJ9 269 aa10.38□□□□□ -0.75
HNRNPU-207ENST00000468690 WDR43Q15061 677 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■□□□ 13.5
HNRNPU-207ENST00000468690 RTL5Q5HYW3 569 aaPredicted RBP10.38□□□□□ -0.75
HNRNPU-207ENST00000468690 SIN3AQ96ST3 1273 aa10.38□□□□□ -0.75
HNRNPU-207ENST00000468690 FAM9BQ8IZU0 186 aa10.38□□□□□ -0.75
HNRNPU-207ENST00000468690 CARD11Q9BXL7 1154 aa10.38□□□□□ -0.75
HNRNPU-207ENST00000468690 FKBP8Q14318 412 aa10.36□□□□□ -0.75
HNRNPU-207ENST00000468690 LRRC9Q6ZRR7 1453 aa10.36□□□□□ -0.75
HNRNPU-207ENST00000468690 BIVM-ERCC5R4GMW8 1640 aa10.35□□□□□ -0.75
HNRNPU-207ENST00000468690 MPHOSPH9Q99550 1183 aa10.35□□□□□ -0.75
HNRNPU-207ENST00000468690 ABCA10Q8WWZ4 1543 aa10.35□□□□□ -0.75
HNRNPU-207ENST00000468690 DHX57Q6P158 1386 aaKnown RBP10.34□□□□□ -0.75
HNRNPU-207ENST00000468690 CUL7Q14999 1698 aa10.34□□□□□ -0.75
HNRNPU-207ENST00000468690 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
HNRNPU-207ENST00000468690 MYOM3Q5VTT5 1437 aa10.33□□□□□ -0.76
HNRNPU-207ENST00000468690 RRBP1Q9P2E9 1410 aaKnown RBP10.33□□□□□ -0.76
HNRNPU-207ENST00000468690 PPP1R15AO75807 674 aaPredicted RBP10.33□□□□□ -0.76
HNRNPU-207ENST00000468690 PTPRGP23470 1445 aa10.32□□□□□ -0.76
HNRNPU-207ENST00000468690 FGD6Q6ZV73 1430 aa10.32□□□□□ -0.76
HNRNPU-207ENST00000468690 ANP32AP39687 249 aaKnown RBP10.31□□□□□ -0.76
HNRNPU-207ENST00000468690 ARAP1Q96P48 1450 aa10.31□□□□□ -0.76
HNRNPU-207ENST00000468690 KNSTRNQ9Y448 316 aa10.31□□□□□ -0.76
HNRNPU-207ENST00000468690 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
HNRNPU-207ENST00000468690 PKD2Q13563 968 aa10.3□□□□□ -0.76
HNRNPU-207ENST00000468690 TMF1P82094 1093 aa10.3□□□□□ -0.76
HNRNPU-207ENST00000468690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.3□□□□□ -0.76
HNRNPU-207ENST00000468690 RGL3Q3MIN7 710 aa10.29□□□□□ -0.76
HNRNPU-207ENST00000468690 NUP155O75694 1391 aa10.29□□□□□ -0.76
HNRNPU-207ENST00000468690 EHBP1L1Q8N3D4 1523 aa10.29□□□□□ -0.76
HNRNPU-207ENST00000468690 AQRO60306 1485 aaKnown RBP eCLIP10.29□□□□□ -0.761e-7■■■■□ 25.3
HNRNPU-207ENST00000468690 CFAP53Q96M91 514 aa10.29□□□□□ -0.76
HNRNPU-207ENST00000468690 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
HNRNPU-207ENST00000468690 ROCK2O75116 1388 aaKnown RBP10.28□□□□□ -0.76
HNRNPU-207ENST00000468690 HIRIP3Q9BW71 556 aaPredicted RBP10.27□□□□□ -0.76
HNRNPU-207ENST00000468690 HECW1Q76N89 1606 aa10.27□□□□□ -0.77
HNRNPU-207ENST00000468690 NESP48681 1621 aa10.27□□□□□ -0.77
HNRNPU-207ENST00000468690 DCAF11Q8TEB1 546 aa10.27□□□□□ -0.77
HNRNPU-207ENST00000468690 TIAM1Q13009 1591 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms