RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
UBE4B-206ENST00000466379 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
UBE4B-206ENST00000466379 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
UBE4B-206ENST00000466379 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
UBE4B-206ENST00000466379 FHOD3Q2V2M9 1422 aa20.67■□□□□ 0.9
UBE4B-206ENST00000466379 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
UBE4B-206ENST00000466379 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.89
UBE4B-206ENST00000466379 CCER1Q8TC90 406 aaPredicted RBP20.63■□□□□ 0.89
UBE4B-206ENST00000466379 EFCAB5A4FU69 1503 aa20.63■□□□□ 0.89
UBE4B-206ENST00000466379 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
UBE4B-206ENST00000466379 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
UBE4B-206ENST00000466379 PCF11O94913 1555 aaKnown RBP20.62■□□□□ 0.89
UBE4B-206ENST00000466379 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
UBE4B-206ENST00000466379 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
UBE4B-206ENST00000466379 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
UBE4B-206ENST00000466379 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
UBE4B-206ENST00000466379 SAMD9Q5K651 1589 aa20.54■□□□□ 0.88
UBE4B-206ENST00000466379 MAP3K1Q13233 1512 aa20.52■□□□□ 0.88
UBE4B-206ENST00000466379 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
UBE4B-206ENST00000466379 CFAP43Q8NDM7 1665 aa20.5■□□□□ 0.87
UBE4B-206ENST00000466379 FYCO1Q9BQS8 1478 aa20.49■□□□□ 0.87
UBE4B-206ENST00000466379 LRRC9Q6ZRR7 1453 aa20.49■□□□□ 0.87
UBE4B-206ENST00000466379 CASKIN1Q8WXD9 1431 aa20.48■□□□□ 0.87
UBE4B-206ENST00000466379 IQGAP2Q13576 1575 aa20.47■□□□□ 0.87
UBE4B-206ENST00000466379 FMN1Q68DA7 1419 aa20.46■□□□□ 0.87
UBE4B-206ENST00000466379 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
UBE4B-206ENST00000466379 CCNB3Q8WWL7 1395 aa20.41■□□□□ 0.86
UBE4B-206ENST00000466379 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
UBE4B-206ENST00000466379 LRRIQ1Q96JM4 1722 aa20.39■□□□□ 0.86
UBE4B-206ENST00000466379 PHLDB1Q86UU1 1377 aa20.38■□□□□ 0.85
UBE4B-206ENST00000466379 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
UBE4B-206ENST00000466379 ITGAEP38570 1179 aa20.35■□□□□ 0.85
UBE4B-206ENST00000466379 FBLN2P98095 1184 aa20.34■□□□□ 0.85
UBE4B-206ENST00000466379 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
UBE4B-206ENST00000466379 KIAA0586Q9BVV6 1533 aa20.34■□□□□ 0.85
UBE4B-206ENST00000466379 UGGT2Q9NYU1 1516 aa20.33■□□□□ 0.85
UBE4B-206ENST00000466379 SYNJ2O15056 1496 aa20.33■□□□□ 0.84
UBE4B-206ENST00000466379 CEP170Q5SW79 1584 aa20.3■□□□□ 0.84
UBE4B-206ENST00000466379 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
UBE4B-206ENST00000466379 DISP1Q96F81 1524 aa20.27■□□□□ 0.84
UBE4B-206ENST00000466379 KIAA0556O60303 1618 aa20.27■□□□□ 0.83
UBE4B-206ENST00000466379 FAM50AQ14320 339 aaKnown RBP20.27■□□□□ 0.83
UBE4B-206ENST00000466379 HECW1Q76N89 1606 aa20.24■□□□□ 0.83
UBE4B-206ENST00000466379 ARID3CA6NKF2 412 aa20.23■□□□□ 0.83
UBE4B-206ENST00000466379 MAGI3Q5TCQ9 1506 aa20.21■□□□□ 0.83
UBE4B-206ENST00000466379 CCDC18Q5T9S5 1454 aa20.2■□□□□ 0.82
UBE4B-206ENST00000466379 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
UBE4B-206ENST00000466379 NUP160Q12769 1436 aa20.19■□□□□ 0.82
UBE4B-206ENST00000466379 EPRSP07814 1512 aaKnown RBP20.19■□□□□ 0.82
UBE4B-206ENST00000466379 EHBP1L1Q8N3D4 1523 aa20.19■□□□□ 0.82
UBE4B-206ENST00000466379 NCOA2Q15596 1464 aa20.18■□□□□ 0.82
UBE4B-206ENST00000466379 DHX57Q6P158 1386 aaKnown RBP20.17■□□□□ 0.82
UBE4B-206ENST00000466379 SUPT6HQ7KZ85 1726 aaKnown RBP20.17■□□□□ 0.82
UBE4B-206ENST00000466379 FGD6Q6ZV73 1430 aa20.16■□□□□ 0.82
UBE4B-206ENST00000466379 JPH4Q96JJ6 628 aa20.13■□□□□ 0.81
UBE4B-206ENST00000466379 RAB3GAP2Q9H2M9 1393 aa20.12■□□□□ 0.81
UBE4B-206ENST00000466379 RAPGEF6Q8TEU7 1601 aa20.11■□□□□ 0.81
UBE4B-206ENST00000466379 MYOM3Q5VTT5 1437 aa20.1■□□□□ 0.81
UBE4B-206ENST00000466379 NUP153P49790 1475 aaKnown RBP20.09■□□□□ 0.81
UBE4B-206ENST00000466379 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
UBE4B-206ENST00000466379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.08■□□□□ 0.81
UBE4B-206ENST00000466379 CHD1O14646 1710 aa20.08■□□□□ 0.8
UBE4B-206ENST00000466379 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
UBE4B-206ENST00000466379 SLC24A1O60721 1099 aa20.07■□□□□ 0.8
UBE4B-206ENST00000466379 PLB1Q6P1J6 1458 aa20.07■□□□□ 0.8
UBE4B-206ENST00000466379 CARMIL2Q6F5E8 1435 aa20.06■□□□□ 0.8
UBE4B-206ENST00000466379 PTPN23Q9H3S7 1636 aa20.03■□□□□ 0.8
UBE4B-206ENST00000466379 PTPRKQ15262 1439 aa20.02■□□□□ 0.8
UBE4B-206ENST00000466379 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
UBE4B-206ENST00000466379 PRG4Q92954 1404 aaPredicted RBP19.97■□□□□ 0.79
UBE4B-206ENST00000466379 MAPKBP1O60336 1514 aa19.95■□□□□ 0.78
UBE4B-206ENST00000466379 TCOF1Q13428 1488 aaKnown RBP19.94■□□□□ 0.78
UBE4B-206ENST00000466379 ABCA8O94911 1581 aa19.93■□□□□ 0.78
UBE4B-206ENST00000466379 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
UBE4B-206ENST00000466379 TROQ12816 1431 aaPredicted RBP19.9■□□□□ 0.78
UBE4B-206ENST00000466379 MIA2Q96PC5 1412 aa19.9■□□□□ 0.78
UBE4B-206ENST00000466379 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
UBE4B-206ENST00000466379 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
UBE4B-206ENST00000466379 CHIC2Q9UKJ5 165 aa19.88■□□□□ 0.77
UBE4B-206ENST00000466379 KIF14Q15058 1648 aa19.87■□□□□ 0.77
UBE4B-206ENST00000466379 PTPRGP23470 1445 aa19.87■□□□□ 0.77
UBE4B-206ENST00000466379 SHROOM2Q13796 1616 aa19.86■□□□□ 0.77
UBE4B-206ENST00000466379 NAIPQ13075 1403 aa19.86■□□□□ 0.77
UBE4B-206ENST00000466379 RRP7BPQ9NSQ0 103 aa19.85■□□□□ 0.77
UBE4B-206ENST00000466379 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
UBE4B-206ENST00000466379 ATP10BO94823 1461 aa19.85■□□□□ 0.77
UBE4B-206ENST00000466379 ZNF644Q9H582 1327 aaPredicted RBP19.85■□□□□ 0.77
UBE4B-206ENST00000466379 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.76
UBE4B-206ENST00000466379 ADCY10Q96PN6 1610 aa19.82■□□□□ 0.76
UBE4B-206ENST00000466379 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
UBE4B-206ENST00000466379 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
UBE4B-206ENST00000466379 GPATCH8Q9UKJ3 1502 aaKnown RBP19.78■□□□□ 0.76
UBE4B-206ENST00000466379 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
UBE4B-206ENST00000466379 GCC2Q8IWJ2 1684 aa19.78■□□□□ 0.76
UBE4B-206ENST00000466379 DAPK1P53355 1430 aa19.78■□□□□ 0.76
UBE4B-206ENST00000466379 ITSN2Q9NZM3 1697 aa19.77■□□□□ 0.76
UBE4B-206ENST00000466379 CLASP1Q7Z460 1538 aa19.77■□□□□ 0.76
UBE4B-206ENST00000466379 CFDP1Q9UEE9 299 aaPredicted RBP19.77■□□□□ 0.75
UBE4B-206ENST00000466379 KDM6BO15054 1643 aa19.77■□□□□ 0.75
UBE4B-206ENST00000466379 DNMT1P26358 1616 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms