RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ERICH3Q5RHP9 1530 aa24.27■■□□□ 1.48
HDAC6-215ENST00000465457 ADCY10Q96PN6 1610 aa24.26■■□□□ 1.47
HDAC6-215ENST00000465457 TSPOAP1O95153 1857 aa24.25■■□□□ 1.47
HDAC6-215ENST00000465457 MAPKBP1O60336 1514 aa24.25■■□□□ 1.47
HDAC6-215ENST00000465457 FAM69CQ0P6D2 419 aa24.23■■□□□ 1.47
HDAC6-215ENST00000465457 KDM6BO15054 1643 aa24.23■■□□□ 1.47
HDAC6-215ENST00000465457 KDM4FA0A1W2PPD8 638 aa24.22■■□□□ 1.47
HDAC6-215ENST00000465457 JPH4Q96JJ6 628 aa24.16■■□□□ 1.46
HDAC6-215ENST00000465457 ILDR1Q86SU0 546 aaPredicted RBP24.12■■□□□ 1.45
HDAC6-215ENST00000465457 NPM1P06748 294 aaKnown RBP eCLIP24.03■■□□□ 1.44
HDAC6-215ENST00000465457 PPRC1Q5VV67 1664 aaKnown RBP24.02■■□□□ 1.44
HDAC6-215ENST00000465457 SUPT5HO00267 1087 aaKnown RBP23.98■■□□□ 1.43
HDAC6-215ENST00000465457 ADGRL1O94910 1474 aa23.93■■□□□ 1.42
HDAC6-215ENST00000465457 KIAA0586Q9BVV6 1533 aa23.92■■□□□ 1.42
HDAC6-215ENST00000465457 CUL7Q14999 1698 aa23.88■■□□□ 1.41
HDAC6-215ENST00000465457 HECW2Q9P2P5 1572 aa23.86■■□□□ 1.41
HDAC6-215ENST00000465457 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.4
HDAC6-215ENST00000465457 ABCC2Q92887 1545 aa23.82■■□□□ 1.4
HDAC6-215ENST00000465457 ASXL2Q76L83 1435 aa23.82■■□□□ 1.4
HDAC6-215ENST00000465457 GLI2P10070 1586 aa23.82■■□□□ 1.4
HDAC6-215ENST00000465457 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
HDAC6-215ENST00000465457 PTPRGP23470 1445 aa23.8■■□□□ 1.4
HDAC6-215ENST00000465457 IGF1RP08069 1367 aa23.78■■□□□ 1.4
HDAC6-215ENST00000465457 MAP3K4Q9Y6R4 1608 aa23.76■■□□□ 1.39
HDAC6-215ENST00000465457 PLB1Q6P1J6 1458 aa23.73■■□□□ 1.39
HDAC6-215ENST00000465457 TNIKQ9UKE5 1360 aa23.7■■□□□ 1.38
HDAC6-215ENST00000465457 IQGAP2Q13576 1575 aa23.69■■□□□ 1.38
HDAC6-215ENST00000465457 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
HDAC6-215ENST00000465457 EPRSP07814 1512 aaKnown RBP23.68■■□□□ 1.38
HDAC6-215ENST00000465457 UHRF1BP1LA0JNW5 1464 aa23.67■■□□□ 1.38
HDAC6-215ENST00000465457 ZCCHC11Q5TAX3 1644 aaKnown RBP23.66■■□□□ 1.38
HDAC6-215ENST00000465457 DISP1Q96F81 1524 aa23.64■■□□□ 1.38
HDAC6-215ENST00000465457 CARMIL2Q6F5E8 1435 aa23.64■■□□□ 1.37
HDAC6-215ENST00000465457 UACAQ9BZF9 1416 aa23.62■■□□□ 1.37
HDAC6-215ENST00000465457 KDM5BQ9UGL1 1544 aa23.61■■□□□ 1.37
HDAC6-215ENST00000465457 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
HDAC6-215ENST00000465457 TEX14Q8IWB6 1497 aa23.57■■□□□ 1.36
HDAC6-215ENST00000465457 KIAA0556O60303 1618 aa23.53■■□□□ 1.36
HDAC6-215ENST00000465457 KIF21BO75037 1637 aa23.52■■□□□ 1.36
HDAC6-215ENST00000465457 UGGT2Q9NYU1 1516 aa23.49■■□□□ 1.35
HDAC6-215ENST00000465457 WDR7Q9Y4E6 1490 aa23.48■■□□□ 1.35
HDAC6-215ENST00000465457 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
HDAC6-215ENST00000465457 MAGI3Q5TCQ9 1506 aa23.38■■□□□ 1.33
HDAC6-215ENST00000465457 CTTNBP2Q8WZ74 1663 aa23.35■■□□□ 1.33
HDAC6-215ENST00000465457 CD109Q6YHK3 1445 aa23.34■■□□□ 1.33
HDAC6-215ENST00000465457 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
HDAC6-215ENST00000465457 ABCA8O94911 1581 aa23.32■■□□□ 1.32
HDAC6-215ENST00000465457 FBXO41Q8TF61 875 aa23.32■■□□□ 1.32
HDAC6-215ENST00000465457 ADAMTSL3P82987 1691 aa23.29■■□□□ 1.32
HDAC6-215ENST00000465457 KCNH8Q96L42 1107 aa23.28■■□□□ 1.32
HDAC6-215ENST00000465457 PTPRMP28827 1452 aa23.24■■□□□ 1.31
HDAC6-215ENST00000465457 ARAP3Q8WWN8 1544 aa23.22■■□□□ 1.31
HDAC6-215ENST00000465457 MADDQ8WXG6 1647 aa23.2■■□□□ 1.3
HDAC6-215ENST00000465457 BCORL1Q5H9F3 1711 aa23.18■■□□□ 1.3
HDAC6-215ENST00000465457 PCF11O94913 1555 aaKnown RBP23.17■■□□□ 1.3
HDAC6-215ENST00000465457 FRMPD1Q5SYB0 1578 aa23.17■■□□□ 1.3
HDAC6-215ENST00000465457 ARID3CA6NKF2 412 aa23.15■■□□□ 1.3
HDAC6-215ENST00000465457 LMTK3Q96Q04 1460 aa23.15■■□□□ 1.3
HDAC6-215ENST00000465457 ABCA9Q8IUA7 1624 aa23.15■■□□□ 1.3
HDAC6-215ENST00000465457 GOLGA3Q08378 1498 aa23.14■■□□□ 1.29
HDAC6-215ENST00000465457 RIMS1Q86UR5 1692 aaKnown RBP23.1■■□□□ 1.29
HDAC6-215ENST00000465457 ATP10BO94823 1461 aa23.07■■□□□ 1.28
HDAC6-215ENST00000465457 RAPGEF3O95398 923 aa23.07■■□□□ 1.28
HDAC6-215ENST00000465457 SIGLEC1Q9BZZ2 1709 aa23.03■■□□□ 1.28
HDAC6-215ENST00000465457 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
HDAC6-215ENST00000465457 ARHGEF40Q8TER5 1519 aa23.03■■□□□ 1.28
HDAC6-215ENST00000465457 RICTORQ6R327 1708 aa22.99■■□□□ 1.27
HDAC6-215ENST00000465457 NEO1Q92859 1461 aa22.98■■□□□ 1.27
HDAC6-215ENST00000465457 HSPA2P54652 639 aa22.97■■□□□ 1.27
HDAC6-215ENST00000465457 PRXQ9BXM0 1461 aa22.97■■□□□ 1.27
HDAC6-215ENST00000465457 P3H3Q8IVL6 736 aa22.96■■□□□ 1.27
HDAC6-215ENST00000465457 RAPGEF6Q8TEU7 1601 aa22.96■■□□□ 1.27
HDAC6-215ENST00000465457 ARID4BQ4LE39 1312 aaPredicted RBP22.95■■□□□ 1.26
HDAC6-215ENST00000465457 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
HDAC6-215ENST00000465457 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
HDAC6-215ENST00000465457 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
HDAC6-215ENST00000465457 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
HDAC6-215ENST00000465457 NUP153P49790 1475 aaKnown RBP22.86■■□□□ 1.25
HDAC6-215ENST00000465457 DENND4BO75064 1496 aaPredicted RBP22.83■■□□□ 1.25
HDAC6-215ENST00000465457 TTC37Q6PGP7 1564 aa22.83■■□□□ 1.25
HDAC6-215ENST00000465457 YEATS2Q9ULM3 1422 aa22.82■■□□□ 1.24
HDAC6-215ENST00000465457 ZMYM4Q5VZL5 1548 aa22.82■■□□□ 1.24
HDAC6-215ENST00000465457 ILDR2Q71H61 639 aa22.81■■□□□ 1.24
HDAC6-215ENST00000465457 CERKQ8TCT0 537 aa22.81■■□□□ 1.24
HDAC6-215ENST00000465457 ZFYVE16Q7Z3T8 1539 aa22.8■■□□□ 1.24
HDAC6-215ENST00000465457 FHOD3Q2V2M9 1422 aa22.8■■□□□ 1.24
HDAC6-215ENST00000465457 FANCAO15360 1455 aa22.79■■□□□ 1.24
HDAC6-215ENST00000465457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.78■■□□□ 1.24
HDAC6-215ENST00000465457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
HDAC6-215ENST00000465457 HNRNPUL2Q1KMD3 747 aaKnown RBP22.78■■□□□ 1.24
HDAC6-215ENST00000465457 AKNAQ7Z591 1439 aa22.78■■□□□ 1.24
HDAC6-215ENST00000465457 CFAP74Q9C0B2 1584 aa22.78■■□□□ 1.24
HDAC6-215ENST00000465457 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
HDAC6-215ENST00000465457 EFCAB5A4FU69 1503 aa22.75■■□□□ 1.23
HDAC6-215ENST00000465457 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
HDAC6-215ENST00000465457 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
HDAC6-215ENST00000465457 DISP3Q9P2K9 1392 aa22.73■■□□□ 1.23
HDAC6-215ENST00000465457 MLECQ14165 292 aa22.72■■□□□ 1.23
HDAC6-215ENST00000465457 POGZQ7Z3K3 1410 aa22.72■■□□□ 1.23
HDAC6-215ENST00000465457 ARHGEF12Q9NZN5 1544 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms