RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 CEP170Q5SW79 1584 aa20.71■□□□□ 0.91
RTCB-202ENST00000463455 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
RTCB-202ENST00000463455 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
RTCB-202ENST00000463455 CUL7Q14999 1698 aa20.61■□□□□ 0.89
RTCB-202ENST00000463455 IGF1RP08069 1367 aa20.59■□□□□ 0.89
RTCB-202ENST00000463455 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
RTCB-202ENST00000463455 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
RTCB-202ENST00000463455 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
RTCB-202ENST00000463455 KIAA0586Q9BVV6 1533 aa20.49■□□□□ 0.87
RTCB-202ENST00000463455 PRG4Q92954 1404 aaPredicted RBP20.49■□□□□ 0.87
RTCB-202ENST00000463455 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
RTCB-202ENST00000463455 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
RTCB-202ENST00000463455 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
RTCB-202ENST00000463455 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
RTCB-202ENST00000463455 IQGAP2Q13576 1575 aa20.31■□□□□ 0.84
RTCB-202ENST00000463455 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
RTCB-202ENST00000463455 MAPKBP1O60336 1514 aa20.23■□□□□ 0.83
RTCB-202ENST00000463455 ADCY10Q96PN6 1610 aa20.23■□□□□ 0.83
RTCB-202ENST00000463455 TNIKQ9UKE5 1360 aa20.22■□□□□ 0.83
RTCB-202ENST00000463455 PTPRGP23470 1445 aa20.22■□□□□ 0.83
RTCB-202ENST00000463455 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
RTCB-202ENST00000463455 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
RTCB-202ENST00000463455 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
RTCB-202ENST00000463455 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
RTCB-202ENST00000463455 ABCC10Q5T3U5 1492 aa20.16■□□□□ 0.82
RTCB-202ENST00000463455 KIF13AQ9H1H9 1805 aa20.16■□□□□ 0.82
RTCB-202ENST00000463455 CTTNBP2Q8WZ74 1663 aa20.14■□□□□ 0.81
RTCB-202ENST00000463455 UHRF1BP1LA0JNW5 1464 aa20.13■□□□□ 0.81
RTCB-202ENST00000463455 KIAA0556O60303 1618 aa20.12■□□□□ 0.81
RTCB-202ENST00000463455 EEA1Q15075 1411 aa20.11■□□□□ 0.81
RTCB-202ENST00000463455 ABCC2Q92887 1545 aa20.11■□□□□ 0.81
RTCB-202ENST00000463455 DIP2BQ9P265 1576 aa20.09■□□□□ 0.81
RTCB-202ENST00000463455 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
RTCB-202ENST00000463455 UACAQ9BZF9 1416 aa20.09■□□□□ 0.81
RTCB-202ENST00000463455 FAM69CQ0P6D2 419 aa20.05■□□□□ 0.8
RTCB-202ENST00000463455 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
RTCB-202ENST00000463455 PLB1Q6P1J6 1458 aa20.03■□□□□ 0.8
RTCB-202ENST00000463455 KDM5BQ9UGL1 1544 aa20.02■□□□□ 0.79
RTCB-202ENST00000463455 ASXL2Q76L83 1435 aa19.99■□□□□ 0.79
RTCB-202ENST00000463455 TTBK1Q5TCY1 1321 aaPredicted RBP19.99■□□□□ 0.79
RTCB-202ENST00000463455 GLI2P10070 1586 aa19.96■□□□□ 0.79
RTCB-202ENST00000463455 ZCCHC11Q5TAX3 1644 aaKnown RBP19.93■□□□□ 0.78
RTCB-202ENST00000463455 ABCA8O94911 1581 aa19.92■□□□□ 0.78
RTCB-202ENST00000463455 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
RTCB-202ENST00000463455 KIF21BO75037 1637 aa19.88■□□□□ 0.77
RTCB-202ENST00000463455 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
RTCB-202ENST00000463455 EPRSP07814 1512 aaKnown RBP19.88■□□□□ 0.77
RTCB-202ENST00000463455 WDR7Q9Y4E6 1490 aa19.86■□□□□ 0.77
RTCB-202ENST00000463455 KDM6BO15054 1643 aa19.84■□□□□ 0.77
RTCB-202ENST00000463455 TSPOAP1O95153 1857 aa19.84■□□□□ 0.77
RTCB-202ENST00000463455 MAP3K4Q9Y6R4 1608 aa19.83■□□□□ 0.76
RTCB-202ENST00000463455 PPRC1Q5VV67 1664 aaKnown RBP19.81■□□□□ 0.76
RTCB-202ENST00000463455 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
RTCB-202ENST00000463455 EFCAB5A4FU69 1503 aa19.77■□□□□ 0.76
RTCB-202ENST00000463455 CFAP43Q8NDM7 1665 aa19.75■□□□□ 0.75
RTCB-202ENST00000463455 RAPGEF6Q8TEU7 1601 aa19.74■□□□□ 0.75
RTCB-202ENST00000463455 ATP10BO94823 1461 aa19.73■□□□□ 0.75
RTCB-202ENST00000463455 P3H3Q8IVL6 736 aa19.73■□□□□ 0.75
RTCB-202ENST00000463455 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
RTCB-202ENST00000463455 MSH5O43196 834 aa19.69■□□□□ 0.74
RTCB-202ENST00000463455 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
RTCB-202ENST00000463455 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
RTCB-202ENST00000463455 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
RTCB-202ENST00000463455 KCNH8Q96L42 1107 aa19.64■□□□□ 0.73
RTCB-202ENST00000463455 COL17A1Q9UMD9 1497 aaPredicted RBP19.63■□□□□ 0.73
RTCB-202ENST00000463455 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
RTCB-202ENST00000463455 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
RTCB-202ENST00000463455 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
RTCB-202ENST00000463455 PHLDB1Q86UU1 1377 aa19.59■□□□□ 0.73
RTCB-202ENST00000463455 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
RTCB-202ENST00000463455 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
RTCB-202ENST00000463455 KCNA4P22459 653 aa19.58■□□□□ 0.72
RTCB-202ENST00000463455 ARID3CA6NKF2 412 aa19.57■□□□□ 0.72
RTCB-202ENST00000463455 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
RTCB-202ENST00000463455 ARHGAP35Q9NRY4 1499 aa19.55■□□□□ 0.72
RTCB-202ENST00000463455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
RTCB-202ENST00000463455 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
RTCB-202ENST00000463455 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
RTCB-202ENST00000463455 NEO1Q92859 1461 aa19.53■□□□□ 0.72
RTCB-202ENST00000463455 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
RTCB-202ENST00000463455 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
RTCB-202ENST00000463455 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
RTCB-202ENST00000463455 CDK13Q14004 1512 aaKnown RBP19.45■□□□□ 0.7
RTCB-202ENST00000463455 CFAP74Q9C0B2 1584 aa19.44■□□□□ 0.7
RTCB-202ENST00000463455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.44■□□□□ 0.7
RTCB-202ENST00000463455 ADGRL1O94910 1474 aa19.43■□□□□ 0.7
RTCB-202ENST00000463455 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
RTCB-202ENST00000463455 TTC37Q6PGP7 1564 aa19.39■□□□□ 0.69
RTCB-202ENST00000463455 FANCAO15360 1455 aa19.38■□□□□ 0.69
RTCB-202ENST00000463455 CASKIN1Q8WXD9 1431 aa19.37■□□□□ 0.69
RTCB-202ENST00000463455 CCDC18Q5T9S5 1454 aa19.35■□□□□ 0.69
RTCB-202ENST00000463455 TROQ12816 1431 aaPredicted RBP19.35■□□□□ 0.69
RTCB-202ENST00000463455 AKNAQ7Z591 1439 aa19.35■□□□□ 0.69
RTCB-202ENST00000463455 FRMPD1Q5SYB0 1578 aa19.35■□□□□ 0.69
RTCB-202ENST00000463455 DENND4BO75064 1496 aaPredicted RBP19.35■□□□□ 0.69
RTCB-202ENST00000463455 PLCH2O75038 1416 aa19.34■□□□□ 0.69
RTCB-202ENST00000463455 CLIP1P30622 1438 aa19.34■□□□□ 0.69
RTCB-202ENST00000463455 ATP1B4Q9UN42 357 aaPredicted RBP19.34■□□□□ 0.69
RTCB-202ENST00000463455 KIF14Q15058 1648 aa19.33■□□□□ 0.69
RTCB-202ENST00000463455 FYCO1Q9BQS8 1478 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms