RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
RTCB-202ENST00000463455 AEBP2Q6ZN18 517 aaPredicted RBP27.6■■■□□ 2.01
RTCB-202ENST00000463455 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
RTCB-202ENST00000463455 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
RTCB-202ENST00000463455 ABCC9O60706 1549 aa25.98■■□□□ 1.75
RTCB-202ENST00000463455 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
RTCB-202ENST00000463455 NACADO15069 1562 aa24.9■■□□□ 1.58
RTCB-202ENST00000463455 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
RTCB-202ENST00000463455 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
RTCB-202ENST00000463455 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
RTCB-202ENST00000463455 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
RTCB-202ENST00000463455 UNC13AQ9UPW8 1703 aa24.34■■□□□ 1.49
RTCB-202ENST00000463455 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
RTCB-202ENST00000463455 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
RTCB-202ENST00000463455 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
RTCB-202ENST00000463455 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.45
RTCB-202ENST00000463455 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
RTCB-202ENST00000463455 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
RTCB-202ENST00000463455 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
RTCB-202ENST00000463455 CC2D2AQ9P2K1 1620 aa23.55■■□□□ 1.36
RTCB-202ENST00000463455 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
RTCB-202ENST00000463455 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
RTCB-202ENST00000463455 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
RTCB-202ENST00000463455 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
RTCB-202ENST00000463455 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
RTCB-202ENST00000463455 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
RTCB-202ENST00000463455 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
RTCB-202ENST00000463455 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
RTCB-202ENST00000463455 PEG3Q9GZU2 1588 aa22.79■■□□□ 1.24
RTCB-202ENST00000463455 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
RTCB-202ENST00000463455 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
RTCB-202ENST00000463455 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
RTCB-202ENST00000463455 CUX2O14529 1486 aa22.44■■□□□ 1.18
RTCB-202ENST00000463455 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
RTCB-202ENST00000463455 NESP48681 1621 aa22.39■■□□□ 1.18
RTCB-202ENST00000463455 WIZO95785 1651 aa22.39■■□□□ 1.17
RTCB-202ENST00000463455 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
RTCB-202ENST00000463455 PDS5BQ9NTI5 1447 aa22.27■■□□□ 1.16
RTCB-202ENST00000463455 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
RTCB-202ENST00000463455 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
RTCB-202ENST00000463455 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
RTCB-202ENST00000463455 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
RTCB-202ENST00000463455 KIF21AQ7Z4S6 1674 aa22.15■■□□□ 1.14
RTCB-202ENST00000463455 CFTRP13569 1480 aa22.08■■□□□ 1.12
RTCB-202ENST00000463455 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
RTCB-202ENST00000463455 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
RTCB-202ENST00000463455 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
RTCB-202ENST00000463455 WDR62O43379 1518 aa22■■□□□ 1.11
RTCB-202ENST00000463455 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
RTCB-202ENST00000463455 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
RTCB-202ENST00000463455 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
RTCB-202ENST00000463455 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
RTCB-202ENST00000463455 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
RTCB-202ENST00000463455 FOXD1Q16676 465 aa21.62■■□□□ 1.05
RTCB-202ENST00000463455 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
RTCB-202ENST00000463455 IFT140Q96RY7 1462 aa21.58■■□□□ 1.04
RTCB-202ENST00000463455 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
RTCB-202ENST00000463455 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
RTCB-202ENST00000463455 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
RTCB-202ENST00000463455 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
RTCB-202ENST00000463455 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
RTCB-202ENST00000463455 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
RTCB-202ENST00000463455 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
RTCB-202ENST00000463455 WDR97A6NE52 1622 aa21.32■■□□□ 1
RTCB-202ENST00000463455 CUX1P39880 1505 aa21.29■■□□□ 1
RTCB-202ENST00000463455 SOGA1O94964 1423 aa21.29■■□□□ 1
RTCB-202ENST00000463455 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
RTCB-202ENST00000463455 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.992e-8■■■■□ 19.7
RTCB-202ENST00000463455 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
RTCB-202ENST00000463455 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
RTCB-202ENST00000463455 CHD1O14646 1710 aa21.12■□□□□ 0.97
RTCB-202ENST00000463455 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
RTCB-202ENST00000463455 GRIN2BQ13224 1484 aa21.11■□□□□ 0.97
RTCB-202ENST00000463455 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
RTCB-202ENST00000463455 PPP6R1Q9UPN7 881 aa21.1■□□□□ 0.97
RTCB-202ENST00000463455 ADRA2BP18089 450 aa21.09■□□□□ 0.97
RTCB-202ENST00000463455 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
RTCB-202ENST00000463455 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
RTCB-202ENST00000463455 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
RTCB-202ENST00000463455 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
RTCB-202ENST00000463455 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
RTCB-202ENST00000463455 RIMBP3CA6NJZ7 1639 aa21.06■□□□□ 0.96
RTCB-202ENST00000463455 RIMBP3BA6NNM3 1639 aa21.06■□□□□ 0.96
RTCB-202ENST00000463455 RIMBP3Q9UFD9 1639 aa21.06■□□□□ 0.96
RTCB-202ENST00000463455 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
RTCB-202ENST00000463455 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
RTCB-202ENST00000463455 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
RTCB-202ENST00000463455 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
RTCB-202ENST00000463455 FBLN2P98095 1184 aa21.01■□□□□ 0.95
RTCB-202ENST00000463455 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
RTCB-202ENST00000463455 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
RTCB-202ENST00000463455 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
RTCB-202ENST00000463455 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
RTCB-202ENST00000463455 ERICH3Q5RHP9 1530 aa20.86■□□□□ 0.93
RTCB-202ENST00000463455 ADAMTS12P58397 1594 aa20.85■□□□□ 0.93
RTCB-202ENST00000463455 ARAP1Q96P48 1450 aa20.84■□□□□ 0.93
RTCB-202ENST00000463455 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
RTCB-202ENST00000463455 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
RTCB-202ENST00000463455 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
RTCB-202ENST00000463455 NUP160Q12769 1436 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms