RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 KIAA0586Q9BVV6 1533 aa26.71■■□□□ 1.87
ERCC3-206ENST00000462306 RAPGEF2Q9Y4G8 1499 aa26.71■■□□□ 1.87
ERCC3-206ENST00000462306 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
ERCC3-206ENST00000462306 JPH4Q96JJ6 628 aa26.7■■□□□ 1.86
ERCC3-206ENST00000462306 PRG4Q92954 1404 aaPredicted RBP26.65■■□□□ 1.86
ERCC3-206ENST00000462306 PRXQ9BXM0 1461 aa26.64■■□□□ 1.86
ERCC3-206ENST00000462306 EEA1Q15075 1411 aa26.6■■□□□ 1.85
ERCC3-206ENST00000462306 CSRNP3Q8WYN3 585 aa26.6■■□□□ 1.85
ERCC3-206ENST00000462306 IQGAP2Q13576 1575 aa26.54■■□□□ 1.84
ERCC3-206ENST00000462306 FAM9AQ8IZU1 332 aaPredicted RBP26.49■■□□□ 1.83
ERCC3-206ENST00000462306 CTTNBP2Q8WZ74 1663 aa26.42■■□□□ 1.82
ERCC3-206ENST00000462306 UGGT2Q9NYU1 1516 aa26.42■■□□□ 1.82
ERCC3-206ENST00000462306 CARMIL2Q6F5E8 1435 aa26.4■■□□□ 1.82
ERCC3-206ENST00000462306 DISP1Q96F81 1524 aa26.39■■□□□ 1.81
ERCC3-206ENST00000462306 TNIKQ9UKE5 1360 aa26.33■■□□□ 1.81
ERCC3-206ENST00000462306 KIF21BO75037 1637 aa26.33■■□□□ 1.81
ERCC3-206ENST00000462306 PTPRGP23470 1445 aa26.32■■□□□ 1.8
ERCC3-206ENST00000462306 KIAA0556O60303 1618 aa26.29■■□□□ 1.8
ERCC3-206ENST00000462306 TTBK1Q5TCY1 1321 aaPredicted RBP26.24■■□□□ 1.79
ERCC3-206ENST00000462306 ADCY10Q96PN6 1610 aa26.24■■□□□ 1.79
ERCC3-206ENST00000462306 GOLGA3Q08378 1498 aa26.23■■□□□ 1.79
ERCC3-206ENST00000462306 TRHP20396 242 aaPredicted RBP26.19■■□□□ 1.78
ERCC3-206ENST00000462306 UACAQ9BZF9 1416 aa26.14■■□□□ 1.78
ERCC3-206ENST00000462306 UHRF1BP1LA0JNW5 1464 aa26.13■■□□□ 1.77
ERCC3-206ENST00000462306 NPM1P06748 294 aaKnown RBP eCLIP26.13■■□□□ 1.77
ERCC3-206ENST00000462306 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
ERCC3-206ENST00000462306 SAMD9Q5K651 1589 aa26.12■■□□□ 1.77
ERCC3-206ENST00000462306 UBTFP17480 764 aaKnown RBP26.1■■□□□ 1.77
ERCC3-206ENST00000462306 ABCC2Q92887 1545 aa26.09■■□□□ 1.77
ERCC3-206ENST00000462306 P3H3Q8IVL6 736 aa26.08■■□□□ 1.77
ERCC3-206ENST00000462306 MAPKBP1O60336 1514 aa26.08■■□□□ 1.77
ERCC3-206ENST00000462306 PLB1Q6P1J6 1458 aa26.05■■□□□ 1.76
ERCC3-206ENST00000462306 RANGAP1P46060 587 aaPredicted RBP26.05■■□□□ 1.76
ERCC3-206ENST00000462306 ABCA8O94911 1581 aa26.03■■□□□ 1.76
ERCC3-206ENST00000462306 KDM5BQ9UGL1 1544 aa26.01■■□□□ 1.75
ERCC3-206ENST00000462306 EFCAB5A4FU69 1503 aa25.98■■□□□ 1.75
ERCC3-206ENST00000462306 ABCC10Q5T3U5 1492 aa25.97■■□□□ 1.75
ERCC3-206ENST00000462306 FHOD3Q2V2M9 1422 aa25.97■■□□□ 1.75
ERCC3-206ENST00000462306 KIF13AQ9H1H9 1805 aa25.95■■□□□ 1.74
ERCC3-206ENST00000462306 ZCCHC11Q5TAX3 1644 aaKnown RBP25.93■■□□□ 1.74
ERCC3-206ENST00000462306 ASXL2Q76L83 1435 aa25.93■■□□□ 1.74
ERCC3-206ENST00000462306 DIP2BQ9P265 1576 aa25.91■■□□□ 1.74
ERCC3-206ENST00000462306 FAM69CQ0P6D2 419 aa25.9■■□□□ 1.74
ERCC3-206ENST00000462306 ARHGAP35Q9NRY4 1499 aa25.88■■□□□ 1.73
ERCC3-206ENST00000462306 RAPGEF6Q8TEU7 1601 aa25.85■■□□□ 1.73
ERCC3-206ENST00000462306 ATP10BO94823 1461 aa25.82■■□□□ 1.72
ERCC3-206ENST00000462306 NUP153P49790 1475 aaKnown RBP25.79■■□□□ 1.72
ERCC3-206ENST00000462306 ARID3CA6NKF2 412 aa25.79■■□□□ 1.72
ERCC3-206ENST00000462306 WDR7Q9Y4E6 1490 aa25.79■■□□□ 1.72
ERCC3-206ENST00000462306 EPRSP07814 1512 aaKnown RBP25.78■■□□□ 1.72
ERCC3-206ENST00000462306 GLI2P10070 1586 aa25.78■■□□□ 1.72
ERCC3-206ENST00000462306 FMN1Q68DA7 1419 aa25.75■■□□□ 1.71
ERCC3-206ENST00000462306 CLIP1P30622 1438 aa25.71■■□□□ 1.71
ERCC3-206ENST00000462306 LOC105371045A0A1W2PR82 267 aa25.66■■□□□ 1.7
ERCC3-206ENST00000462306 KCNH8Q96L42 1107 aa25.66■■□□□ 1.7
ERCC3-206ENST00000462306 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
ERCC3-206ENST00000462306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.65■■□□□ 1.7
ERCC3-206ENST00000462306 HNRNPUL2Q1KMD3 747 aaKnown RBP25.65■■□□□ 1.7
ERCC3-206ENST00000462306 MAP3K4Q9Y6R4 1608 aa25.65■■□□□ 1.7
ERCC3-206ENST00000462306 PPRC1Q5VV67 1664 aaKnown RBP25.62■■□□□ 1.69
ERCC3-206ENST00000462306 HECW1Q76N89 1606 aa25.62■■□□□ 1.69
ERCC3-206ENST00000462306 CDK13Q14004 1512 aaKnown RBP25.6■■□□□ 1.69
ERCC3-206ENST00000462306 CEP162Q5TB80 1403 aa25.59■■□□□ 1.69
ERCC3-206ENST00000462306 ATP1B4Q9UN42 357 aaPredicted RBP25.58■■□□□ 1.69
ERCC3-206ENST00000462306 PLEKHD1A6NEE1 506 aa25.57■■□□□ 1.68
ERCC3-206ENST00000462306 CASKIN1Q8WXD9 1431 aa25.56■■□□□ 1.68
ERCC3-206ENST00000462306 CFAP43Q8NDM7 1665 aa25.56■■□□□ 1.68
ERCC3-206ENST00000462306 CD109Q6YHK3 1445 aa25.55■■□□□ 1.68
ERCC3-206ENST00000462306 PCF11O94913 1555 aaKnown RBP25.54■■□□□ 1.68
ERCC3-206ENST00000462306 MAGI3Q5TCQ9 1506 aa25.52■■□□□ 1.68
ERCC3-206ENST00000462306 ABCA9Q8IUA7 1624 aa25.52■■□□□ 1.68
ERCC3-206ENST00000462306 TEX14Q8IWB6 1497 aa25.51■■□□□ 1.67
ERCC3-206ENST00000462306 LRRIQ1Q96JM4 1722 aa25.51■■□□□ 1.67
ERCC3-206ENST00000462306 FYCO1Q9BQS8 1478 aa25.49■■□□□ 1.67
ERCC3-206ENST00000462306 KDM6BO15054 1643 aa25.48■■□□□ 1.67
ERCC3-206ENST00000462306 CDK11AQ9UQ88 783 aaPredicted RBP25.44■■□□□ 1.66
ERCC3-206ENST00000462306 CCDC18Q5T9S5 1454 aa25.44■■□□□ 1.66
ERCC3-206ENST00000462306 COL17A1Q9UMD9 1497 aaPredicted RBP25.42■■□□□ 1.66
ERCC3-206ENST00000462306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.42■■□□□ 1.66
ERCC3-206ENST00000462306 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.66
ERCC3-206ENST00000462306 TTC37Q6PGP7 1564 aa25.37■■□□□ 1.65
ERCC3-206ENST00000462306 KIF14Q15058 1648 aa25.33■■□□□ 1.65
ERCC3-206ENST00000462306 NEO1Q92859 1461 aa25.31■■□□□ 1.64
ERCC3-206ENST00000462306 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
ERCC3-206ENST00000462306 ARAP3Q8WWN8 1544 aa25.3■■□□□ 1.64
ERCC3-206ENST00000462306 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
ERCC3-206ENST00000462306 PLCH2O75038 1416 aa25.28■■□□□ 1.64
ERCC3-206ENST00000462306 FANCAO15360 1455 aa25.25■■□□□ 1.63
ERCC3-206ENST00000462306 AKNAQ7Z591 1439 aa25.21■■□□□ 1.63
ERCC3-206ENST00000462306 MYO5CQ9NQX4 1742 aa25.21■■□□□ 1.63
ERCC3-206ENST00000462306 CFAP74Q9C0B2 1584 aa25.2■■□□□ 1.62
ERCC3-206ENST00000462306 MTUS2Q5JR59 1369 aa25.18■■□□□ 1.62
ERCC3-206ENST00000462306 RAPGEF3O95398 923 aa25.17■■□□□ 1.62
ERCC3-206ENST00000462306 EFCAB2Q5VUJ9 269 aa25.16■■□□□ 1.62
ERCC3-206ENST00000462306 TIAM1Q13009 1591 aa25.14■■□□□ 1.61
ERCC3-206ENST00000462306 FRMPD1Q5SYB0 1578 aa25.14■■□□□ 1.61
ERCC3-206ENST00000462306 DENND4BO75064 1496 aaPredicted RBP25.13■■□□□ 1.61
ERCC3-206ENST00000462306 ARHGAP5Q13017 1502 aa25.12■■□□□ 1.61
ERCC3-206ENST00000462306 EHBP1L1Q8N3D4 1523 aa25.12■■□□□ 1.61
ERCC3-206ENST00000462306 CDC42BPBQ9Y5S2 1711 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms