RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
SYN3-207ENST00000462268 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
SYN3-207ENST00000462268 NUP160Q12769 1436 aa15.21■□□□□ 0.03
SYN3-207ENST00000462268 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
SYN3-207ENST00000462268 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
SYN3-207ENST00000462268 IGF1RP08069 1367 aa15.13■□□□□ 0.01
SYN3-207ENST00000462268 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
SYN3-207ENST00000462268 CUL7Q14999 1698 aa15.09■□□□□ 0.01
SYN3-207ENST00000462268 DMRT2Q9Y5R5 561 aa15.08■□□□□ 0
SYN3-207ENST00000462268 CARMIL1Q5VZK9 1371 aa15.06■□□□□ 0
SYN3-207ENST00000462268 SHROOM2Q13796 1616 aa15.06■□□□□ 0
SYN3-207ENST00000462268 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
SYN3-207ENST00000462268 JPH4Q96JJ6 628 aa15.04■□□□□ -0
SYN3-207ENST00000462268 PRG4Q92954 1404 aaPredicted RBP15.03■□□□□ -0
SYN3-207ENST00000462268 ERCC6L2Q5T890 1561 aa15.02■□□□□ -0
SYN3-207ENST00000462268 KIAA0586Q9BVV6 1533 aa15.02■□□□□ -0
SYN3-207ENST00000462268 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
SYN3-207ENST00000462268 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
SYN3-207ENST00000462268 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
SYN3-207ENST00000462268 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
SYN3-207ENST00000462268 IQGAP2Q13576 1575 aa14.89□□□□□ -0.03
SYN3-207ENST00000462268 PRXQ9BXM0 1461 aa14.85□□□□□ -0.03
SYN3-207ENST00000462268 TNIKQ9UKE5 1360 aa14.85□□□□□ -0.03
SYN3-207ENST00000462268 PTPRGP23470 1445 aa14.84□□□□□ -0.03
SYN3-207ENST00000462268 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
SYN3-207ENST00000462268 EEA1Q15075 1411 aa14.83□□□□□ -0.04
SYN3-207ENST00000462268 UGGT2Q9NYU1 1516 aa14.82□□□□□ -0.04
SYN3-207ENST00000462268 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
SYN3-207ENST00000462268 DISP1Q96F81 1524 aa14.79□□□□□ -0.04
SYN3-207ENST00000462268 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.04
SYN3-207ENST00000462268 MAPKBP1O60336 1514 aa14.77□□□□□ -0.04
SYN3-207ENST00000462268 TTBK1Q5TCY1 1321 aaPredicted RBP14.77□□□□□ -0.04
SYN3-207ENST00000462268 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
SYN3-207ENST00000462268 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
SYN3-207ENST00000462268 UHRF1BP1LA0JNW5 1464 aa14.74□□□□□ -0.05
SYN3-207ENST00000462268 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
SYN3-207ENST00000462268 ABCC2Q92887 1545 aa14.73□□□□□ -0.05
SYN3-207ENST00000462268 ABCC10Q5T3U5 1492 aa14.73□□□□□ -0.05
SYN3-207ENST00000462268 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.05
SYN3-207ENST00000462268 FAM69CQ0P6D2 419 aa14.7□□□□□ -0.06
SYN3-207ENST00000462268 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
SYN3-207ENST00000462268 DIP2BQ9P265 1576 aa14.66□□□□□ -0.06
SYN3-207ENST00000462268 PLB1Q6P1J6 1458 aa14.66□□□□□ -0.06
SYN3-207ENST00000462268 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
SYN3-207ENST00000462268 KDM5BQ9UGL1 1544 aa14.65□□□□□ -0.06
SYN3-207ENST00000462268 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
SYN3-207ENST00000462268 KIF21BO75037 1637 aa14.62□□□□□ -0.07
SYN3-207ENST00000462268 KIF13AQ9H1H9 1805 aa14.61□□□□□ -0.07
SYN3-207ENST00000462268 ABCA8O94911 1581 aa14.6□□□□□ -0.07
SYN3-207ENST00000462268 SAMD9Q5K651 1589 aa14.58□□□□□ -0.08
SYN3-207ENST00000462268 P3H3Q8IVL6 736 aa14.57□□□□□ -0.08
SYN3-207ENST00000462268 GLI2P10070 1586 aa14.56□□□□□ -0.08
SYN3-207ENST00000462268 ZCCHC11Q5TAX3 1644 aaKnown RBP14.56□□□□□ -0.08
SYN3-207ENST00000462268 WDR7Q9Y4E6 1490 aa14.56□□□□□ -0.08
SYN3-207ENST00000462268 EPRSP07814 1512 aaKnown RBP14.56□□□□□ -0.08
SYN3-207ENST00000462268 EFCAB5A4FU69 1503 aa14.53□□□□□ -0.08
SYN3-207ENST00000462268 RANGAP1P46060 587 aaPredicted RBP14.53□□□□□ -0.08
SYN3-207ENST00000462268 FHOD3Q2V2M9 1422 aa14.52□□□□□ -0.08
SYN3-207ENST00000462268 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
SYN3-207ENST00000462268 TEX14Q8IWB6 1497 aa14.49□□□□□ -0.09
SYN3-207ENST00000462268 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
SYN3-207ENST00000462268 ATP10BO94823 1461 aa14.48□□□□□ -0.09
SYN3-207ENST00000462268 KDM6BO15054 1643 aa14.48□□□□□ -0.09
SYN3-207ENST00000462268 ARID3CA6NKF2 412 aa14.47□□□□□ -0.09
SYN3-207ENST00000462268 RAPGEF6Q8TEU7 1601 aa14.47□□□□□ -0.09
SYN3-207ENST00000462268 MAP3K4Q9Y6R4 1608 aa14.45□□□□□ -0.1
SYN3-207ENST00000462268 KCNH8Q96L42 1107 aa14.45□□□□□ -0.1
SYN3-207ENST00000462268 NUP153P49790 1475 aaKnown RBP14.44□□□□□ -0.1
SYN3-207ENST00000462268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
SYN3-207ENST00000462268 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
SYN3-207ENST00000462268 CD109Q6YHK3 1445 aa14.43□□□□□ -0.1
SYN3-207ENST00000462268 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
SYN3-207ENST00000462268 FMN1Q68DA7 1419 aa14.42□□□□□ -0.1
SYN3-207ENST00000462268 TSPOAP1O95153 1857 aa14.42□□□□□ -0.1
SYN3-207ENST00000462268 MAGI3Q5TCQ9 1506 aa14.42□□□□□ -0.1
SYN3-207ENST00000462268 PPRC1Q5VV67 1664 aaKnown RBP14.41□□□□□ -0.1
SYN3-207ENST00000462268 ARHGAP35Q9NRY4 1499 aa14.4□□□□□ -0.1
SYN3-207ENST00000462268 CFAP43Q8NDM7 1665 aa14.39□□□□□ -0.11
SYN3-207ENST00000462268 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
SYN3-207ENST00000462268 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
SYN3-207ENST00000462268 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
SYN3-207ENST00000462268 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
SYN3-207ENST00000462268 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
SYN3-207ENST00000462268 ABCA9Q8IUA7 1624 aa14.33□□□□□ -0.11
SYN3-207ENST00000462268 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
SYN3-207ENST00000462268 HECW1Q76N89 1606 aa14.33□□□□□ -0.12
SYN3-207ENST00000462268 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
SYN3-207ENST00000462268 CDK13Q14004 1512 aaKnown RBP14.31□□□□□ -0.12
SYN3-207ENST00000462268 CDK11AQ9UQ88 783 aaPredicted RBP14.3□□□□□ -0.12
SYN3-207ENST00000462268 NEO1Q92859 1461 aa14.3□□□□□ -0.12
SYN3-207ENST00000462268 CLIP1P30622 1438 aa14.29□□□□□ -0.12
SYN3-207ENST00000462268 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
SYN3-207ENST00000462268 CASKIN1Q8WXD9 1431 aa14.26□□□□□ -0.13
SYN3-207ENST00000462268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.25□□□□□ -0.13
SYN3-207ENST00000462268 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
SYN3-207ENST00000462268 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
SYN3-207ENST00000462268 FANCAO15360 1455 aa14.23□□□□□ -0.13
SYN3-207ENST00000462268 FYCO1Q9BQS8 1478 aa14.23□□□□□ -0.13
SYN3-207ENST00000462268 PCF11O94913 1555 aaKnown RBP14.22□□□□□ -0.13
SYN3-207ENST00000462268 KDM4FA0A1W2PPD8 638 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms