RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 AEBP2Q6ZN18 517 aaPredicted RBP22.29■■□□□ 1.16
SYN3-207ENST00000462268 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
SYN3-207ENST00000462268 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
SYN3-207ENST00000462268 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
SYN3-207ENST00000462268 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
SYN3-207ENST00000462268 ABCC9O60706 1549 aa19.03■□□□□ 0.64
SYN3-207ENST00000462268 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
SYN3-207ENST00000462268 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
SYN3-207ENST00000462268 NACADO15069 1562 aa18.19■□□□□ 0.5
SYN3-207ENST00000462268 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
SYN3-207ENST00000462268 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
SYN3-207ENST00000462268 ZCCHC6Q5VYS8 1495 aaKnown RBP18■□□□□ 0.47
SYN3-207ENST00000462268 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
SYN3-207ENST00000462268 FOXD1Q16676 465 aa17.82■□□□□ 0.44
SYN3-207ENST00000462268 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
SYN3-207ENST00000462268 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
SYN3-207ENST00000462268 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.41
SYN3-207ENST00000462268 SHROOM4Q9ULL8 1493 aa17.57■□□□□ 0.4
SYN3-207ENST00000462268 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
SYN3-207ENST00000462268 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
SYN3-207ENST00000462268 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
SYN3-207ENST00000462268 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
SYN3-207ENST00000462268 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
SYN3-207ENST00000462268 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
SYN3-207ENST00000462268 MSH5O43196 834 aa16.83■□□□□ 0.28
SYN3-207ENST00000462268 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
SYN3-207ENST00000462268 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
SYN3-207ENST00000462268 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
SYN3-207ENST00000462268 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
SYN3-207ENST00000462268 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
SYN3-207ENST00000462268 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
SYN3-207ENST00000462268 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
SYN3-207ENST00000462268 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
SYN3-207ENST00000462268 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
SYN3-207ENST00000462268 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
SYN3-207ENST00000462268 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
SYN3-207ENST00000462268 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
SYN3-207ENST00000462268 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
SYN3-207ENST00000462268 WIZO95785 1651 aa16.4■□□□□ 0.22
SYN3-207ENST00000462268 NESP48681 1621 aa16.39■□□□□ 0.21
SYN3-207ENST00000462268 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
SYN3-207ENST00000462268 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
SYN3-207ENST00000462268 CUX2O14529 1486 aa16.35■□□□□ 0.21
SYN3-207ENST00000462268 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
SYN3-207ENST00000462268 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
SYN3-207ENST00000462268 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
SYN3-207ENST00000462268 ADRA2BP18089 450 aa16.29■□□□□ 0.2
SYN3-207ENST00000462268 THOC2Q8NI27 1593 aaKnown RBP16.18■□□□□ 0.18
SYN3-207ENST00000462268 CFTRP13569 1480 aa16.17■□□□□ 0.18
SYN3-207ENST00000462268 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
SYN3-207ENST00000462268 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
SYN3-207ENST00000462268 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
SYN3-207ENST00000462268 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
SYN3-207ENST00000462268 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
SYN3-207ENST00000462268 WDR62O43379 1518 aa16.06■□□□□ 0.16
SYN3-207ENST00000462268 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
SYN3-207ENST00000462268 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
SYN3-207ENST00000462268 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
SYN3-207ENST00000462268 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
SYN3-207ENST00000462268 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
SYN3-207ENST00000462268 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
SYN3-207ENST00000462268 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
SYN3-207ENST00000462268 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
SYN3-207ENST00000462268 ZNF608Q9ULD9 1512 aaPredicted RBP15.69■□□□□ 0.1
SYN3-207ENST00000462268 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
SYN3-207ENST00000462268 CUX1P39880 1505 aa15.63■□□□□ 0.09
SYN3-207ENST00000462268 SOGA1O94964 1423 aa15.62■□□□□ 0.09
SYN3-207ENST00000462268 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
SYN3-207ENST00000462268 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
SYN3-207ENST00000462268 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
SYN3-207ENST00000462268 FGD5Q6ZNL6 1462 aa15.61■□□□□ 0.09
SYN3-207ENST00000462268 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
SYN3-207ENST00000462268 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
SYN3-207ENST00000462268 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
SYN3-207ENST00000462268 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
SYN3-207ENST00000462268 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
SYN3-207ENST00000462268 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
SYN3-207ENST00000462268 GRIN2BQ13224 1484 aa15.47■□□□□ 0.07
SYN3-207ENST00000462268 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
SYN3-207ENST00000462268 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.06
SYN3-207ENST00000462268 FBLN2P98095 1184 aa15.45■□□□□ 0.06
SYN3-207ENST00000462268 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
SYN3-207ENST00000462268 GAPVD1Q14C86 1478 aa15.44■□□□□ 0.06
SYN3-207ENST00000462268 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
SYN3-207ENST00000462268 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
SYN3-207ENST00000462268 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
SYN3-207ENST00000462268 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
SYN3-207ENST00000462268 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
SYN3-207ENST00000462268 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
SYN3-207ENST00000462268 CHD1O14646 1710 aa15.37■□□□□ 0.05
SYN3-207ENST00000462268 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
SYN3-207ENST00000462268 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
SYN3-207ENST00000462268 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
SYN3-207ENST00000462268 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
SYN3-207ENST00000462268 PBRM1Q86U86 1689 aa15.32■□□□□ 0.04
SYN3-207ENST00000462268 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
SYN3-207ENST00000462268 ERICH3Q5RHP9 1530 aa15.28■□□□□ 0.04
SYN3-207ENST00000462268 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
SYN3-207ENST00000462268 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
SYN3-207ENST00000462268 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms